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FFCP PHASE1:Mm9::chr12:113882847..113882895,+: Difference between revisions

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{{FFCP|EntrezGene=30954|HGNC=|MCL_coexpression_id=2770|UniProt=O54926|association_with_transcript=-143bp_to_ENSMUST00000021728,ENSMUST00000109755,NM_001161737,NM_013929,uc007pev.2,uc007pew.2_5end|description=CAGE_peak_4_at_Siva1_5end|id=chr12:113882847..113882895,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.84e-14!86;UBERON:0000153!8.23e-14!94;UBERON:0002791!5.69e-12!29;UBERON:0003528!5.69e-12!29;UBERON:0001893!5.69e-12!29;UBERON:0002020!1.36e-11!34;UBERON:0000956!4.89e-11!21;UBERON:0001869!4.89e-11!21;UBERON:0000203!4.89e-11!21;UBERON:0002780!5.59e-11!39;UBERON:0001890!5.59e-11!39;UBERON:0006240!5.59e-11!39;UBERON:0003080!8.30e-11!40;UBERON:0003056!7.28e-10!49;UBERON:0001049!2.51e-09!52;UBERON:0005068!2.51e-09!52;UBERON:0006241!2.51e-09!52;UBERON:0007135!2.51e-09!52;UBERON:0000955!6.31e-09!50;UBERON:0006238!6.31e-09!50;UBERON:0000033!7.10e-09!63;UBERON:0002619!1.19e-08!17;UBERON:0002616!1.63e-08!49;UBERON:0002021!3.36e-07!10;UBERON:0000411!3.36e-07!10;UBERON:0001950!3.36e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-12,29;UBERON:0002791,1.07e-12,29;UBERON:0001893,1.07e-12,29;UBERON:0002020,2.78e-12,34;UBERON:0002780,1.09e-11,39;UBERON:0001890,1.09e-11,39;UBERON:0006240,1.09e-11,39;UBERON:0003080,1.68e-11,40;UBERON:0000956,2.03e-11,21;UBERON:0001869,2.03e-11,21;UBERON:0000203,2.03e-11,21;UBERON:0000955,3.88e-10,47;UBERON:0006238,3.88e-10,47;UBERON:0003056,5.71e-10,49;UBERON:0002616,1.10e-09,46;UBERON:0001049,3.22e-09,52;UBERON:0005068,3.22e-09,52;UBERON:0006241,3.22e-09,52;UBERON:0007135,3.22e-09,52;UBERON:0002619,6.44e-09,17;UBERON:0000073,7.78e-09,54;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10;UBERON:0002370,5.08e-07,23;UBERON:0000974,5.08e-07,23;UBERON:0004807,5.08e-07,23;UBERON:0005058,5.08e-07,23;UBERON:0003351,5.08e-07,23;UBERON:0009113,5.08e-07,23;UBERON:0003295,5.08e-07,23;UBERON:0009722,5.08e-07,23;UBERON:0005562,5.08e-07,23;UBERON:0007690,5.08e-07,23;UBERON:0002346,5.22e-07,64;UBERON:0003075,5.22e-07,64;UBERON:0007284,5.22e-07,64;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0003408,9.43e-07,24|phase1_expression=4.00372117761985,0,0,0,0,0,0.467225281191051,2.58246646883153,2.25261955442667,3.97909694747389,5.99262888789267,2.55270908785077,2.22560948910567,2.97229368224591,1.33243904726265,1.41732687172878,2.09868563438444,3.62781490161973,2.74228867211478,2.54633791078818,1.53077922271926,1.19149141441062,1.04479915655574,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,0,0.288851619751275,0.332469290716985,0.408338712524738,5.02237956884289,3.1253413780952,4.18818995179039,8.82347232046521,6.83045484958446,7.76816564849846,2.14024590558481,1.72340783073175,0.367093504323363,3.12956537739216,1.74420125104357,1.09843091367236,0.58328969722285,1.25987779462826,2.87505128729943,1.8456086666351,2.90144856804538,2.01656279485478,1.28629718017973,2.29226751951005,2.57836046138721,4.65327859977075,4.23192783417626,1.90149421051854,2.71075625655306,1.77858959222228,0.899899717281399,0,0,0.898800331555214,1.92109152660777,7.36196247390191,10.1254453748768,8.83364837675805,1.14260393761521,1.32521124570968,10.1667363348412,8.72193786265951,14.7075005857603,0,0.766124028511126,1.99688493233117,3.03338461779446,2.47016637726506,4.16730696445408,0,1.68828783009504,1.83357897332172,1.76777151284201,2.27794689278565,2.05039390407831,0.530083353332288,0.377857800533928,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0,1.12355536105401,1.02258193546835,1.81850203222008,1.41335829804136,2.25349471642689,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,1.03575153458869,0.148442139064825,0.173485326766136,0,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,1.23597483867187,1.15679485535929,0,1.13236794963186,1.10420759230197,0.969750506270444,1.86391761218122,0.878342391034642,0.628340120440365,0.255457055208591,1.91704199209472,2.39961092397363,1.27070227073065,1.3481157546434,3.66000482254901,13.9476330845279,3.47648640384553,1.79000820131231,1.66230435647648,1.1356888414743,1.62942982160506,0.995255764880744,0.758168275301024,0.841767423545896,1.69156575851515,2.29902104433473,0.900310649026746,2.71268672104287,1.56483948048054,1.7935920839879,1.3118241438362,0.776110112217047,1.07783996466421,1.13463648100692,1.05570674498369,2.19195732427575,1.94633074457919,2.43776516565517,0.823128545631774,1.19420560091096,1.40442637462647,3.3455227924913,0.568326998791185,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.787056926989615,0.925602677324269,1.16266972375204,0.268273401399619,1.16765342367169,0.658239399653922,0.820837320395476,1.4592385718254,0.877199924551994,1.53685080703735,1.61047702512446,5.2572487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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=30954
|HGNC=
|MCL_coexpression_id=2770
|TSSclassifier=NA
|UniProt=O54926
|association_with_transcript=-143bp_to_ENSMUST00000021728,ENSMUST00000109755,NM_001161737,NM_013929,uc007pev.2,uc007pew.2_5end
|cluster_id=chr12:113882847..113882895,+
|description=CAGE_peak_4_at_Siva1_5end
|id=chr12:113882847..113882895,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.84e-14!86;UBERON:0000153!8.23e-14!94;UBERON:0002791!5.69e-12!29;UBERON:0003528!5.69e-12!29;UBERON:0001893!5.69e-12!29;UBERON:0002020!1.36e-11!34;UBERON:0000956!4.89e-11!21;UBERON:0001869!4.89e-11!21;UBERON:0000203!4.89e-11!21;UBERON:0002780!5.59e-11!39;UBERON:0001890!5.59e-11!39;UBERON:0006240!5.59e-11!39;UBERON:0003080!8.30e-11!40;UBERON:0003056!7.28e-10!49;UBERON:0001049!2.51e-09!52;UBERON:0005068!2.51e-09!52;UBERON:0006241!2.51e-09!52;UBERON:0007135!2.51e-09!52;UBERON:0000955!6.31e-09!50;UBERON:0006238!6.31e-09!50;UBERON:0000033!7.10e-09!63;UBERON:0002619!1.19e-08!17;UBERON:0002616!1.63e-08!49;UBERON:0002021!3.36e-07!10;UBERON:0000411!3.36e-07!10;UBERON:0001950!3.36e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-12,29;UBERON:0002791,1.07e-12,29;UBERON:0001893,1.07e-12,29;UBERON:0002020,2.78e-12,34;UBERON:0002780,1.09e-11,39;UBERON:0001890,1.09e-11,39;UBERON:0006240,1.09e-11,39;UBERON:0003080,1.68e-11,40;UBERON:0000956,2.03e-11,21;UBERON:0001869,2.03e-11,21;UBERON:0000203,2.03e-11,21;UBERON:0000955,3.88e-10,47;UBERON:0006238,3.88e-10,47;UBERON:0003056,5.71e-10,49;UBERON:0002616,1.10e-09,46;UBERON:0001049,3.22e-09,52;UBERON:0005068,3.22e-09,52;UBERON:0006241,3.22e-09,52;UBERON:0007135,3.22e-09,52;UBERON:0002619,6.44e-09,17;UBERON:0000073,7.78e-09,54;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10;UBERON:0002370,5.08e-07,23;UBERON:0000974,5.08e-07,23;UBERON:0004807,5.08e-07,23;UBERON:0005058,5.08e-07,23;UBERON:0003351,5.08e-07,23;UBERON:0009113,5.08e-07,23;UBERON:0003295,5.08e-07,23;UBERON:0009722,5.08e-07,23;UBERON:0005562,5.08e-07,23;UBERON:0007690,5.08e-07,23;UBERON:0002346,5.22e-07,64;UBERON:0003075,5.22e-07,64;UBERON:0007284,5.22e-07,64;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0003408,9.43e-07,24
|phase1_expression=4.00372117761985,0,0,0,0,0,0.467225281191051,2.58246646883153,2.25261955442667,3.97909694747389,5.99262888789267,2.55270908785077,2.22560948910567,2.97229368224591,1.33243904726265,1.41732687172878,2.09868563438444,3.62781490161973,2.74228867211478,2.54633791078818,1.53077922271926,1.19149141441062,1.04479915655574,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,0,0.288851619751275,0.332469290716985,0.408338712524738,5.02237956884289,3.1253413780952,4.18818995179039,8.82347232046521,6.83045484958446,7.76816564849846,2.14024590558481,1.72340783073175,0.367093504323363,3.12956537739216,1.74420125104357,1.09843091367236,0.58328969722285,1.25987779462826,2.87505128729943,1.8456086666351,2.90144856804538,2.01656279485478,1.28629718017973,2.29226751951005,2.57836046138721,4.65327859977075,4.23192783417626,1.90149421051854,2.71075625655306,1.77858959222228,0.899899717281399,0,0,0.898800331555214,1.92109152660777,7.36196247390191,10.1254453748768,8.83364837675805,1.14260393761521,1.32521124570968,10.1667363348412,8.72193786265951,14.7075005857603,0,0.766124028511126,1.99688493233117,3.03338461779446,2.47016637726506,4.16730696445408,0,1.68828783009504,1.83357897332172,1.76777151284201,2.27794689278565,2.05039390407831,0.530083353332288,0.377857800533928,0.869593466105033,0.860423876981386,0.679971333707751,0,0,0,1.12355536105401,1.02258193546835,1.81850203222008,1.41335829804136,2.25349471642689,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,1.03575153458869,0.148442139064825,0.173485326766136,0,0.691846491768175,0.452167921657868,0.940709657085638,0.376999773989026,1.23597483867187,1.15679485535929,0,1.13236794963186,1.10420759230197,0.969750506270444,1.86391761218122,0.878342391034642,0.628340120440365,0.255457055208591,1.91704199209472,2.39961092397363,1.27070227073065,1.3481157546434,3.66000482254901,13.9476330845279,3.47648640384553,1.79000820131231,1.66230435647648,1.1356888414743,1.62942982160506,0.995255764880744,0.758168275301024,0.841767423545896,1.69156575851515,2.29902104433473,0.900310649026746,2.71268672104287,1.56483948048054,1.7935920839879,1.3118241438362,0.776110112217047,1.07783996466421,1.13463648100692,1.05570674498369,2.19195732427575,1.94633074457919,2.43776516565517,0.823128545631774,1.19420560091096,1.40442637462647,3.3455227924913,0.568326998791185,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.787056926989615,0.925602677324269,1.16266972375204,0.268273401399619,1.16765342367169,0.658239399653922,0.820837320395476,1.4592385718254,0.877199924551994,1.53685080703735,1.61047702512446,5.25724871410318,10.3933658503077,1.32167513193519,0,0.853153002140936,2.78684006232526,0.515469845288373,0.403367049246685,2.44615848229357,1.14135375667535,0,0.823494773620054,1.50801125280162,0.795825888164603,0.58489226135736,0,0,0.398282546508734,0.948339504765408,0.799739588268102,1.1270773567308,1.62921062276251,0.581857461502877,1.33258057791605,0.885311519739602,0.295220295959204,0.784993639206874,0.493588655687202,0.889357881261447,2.00214126859313,1.17935397067922,0.899448449539415,1.62288097110802,0.241177159752417,1.2731292589071,1.15078454980324,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.757736633841335,0.538192240565737,0.964887042726734,1.47802552133284,0.757965647081939,1.46668478797823,1.18821560042632,1.64283173801951,1.34005005953453,1.90434912708811,0.780534591431195,2.36452716159286,1.55025282754142,1.75400245523236,1.63863314715738,1.55416483679306,0.723245292907558,0,0.54390568381871,0.491764273019036,0.827810238914197,1.28440471990234,0.937693492737625,1.47541450839008,0.504941854408746,0.315508219416257,0.780877488593277,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,3.85585579706168,0.851640511249612,2.84904965867608,2.28041743095006,1.81467135269789,2.65490276679926,2.42780636154981,0.604647113929502,0.377210159511796,2.06711325016541,0.307435147943927,2.32585463851399,1.09060118843252,1.06949213515416,0.632073515871632,0,2.06271086496374,0.340439605753788,1.08036656418786,2.32845630808958,2.14337035031592,2.12808280370728,1.78368817602071,1.31639216481697,3.34911444026059,1.64270195644597,5.50763384245932,0.441056796109924,0,1.29171541356724,1.56813604813205,0.716234064018819,0.492422699235184,0,0.927126510052548,0.854354403989263,1.65109494370578,2.03713980106683,1.31857919903284,0.956859594047176,2.0590035588587,2.71965487990169,3.49878630809145,3.45499934511059,0,1.58167996790568,1.21991680276109,1.62008011232702,1.25452977608681,1.31017538247707,1.34864346384821,1.07449492442937,1.04702376793612,0,1.24267862617385,7.89170114157866,1.64468200648377,0.992750942742586,2.13896307178452,2.0665571756437,2.19642963138012,3.0512882047896,1.43224823328345,2.41176492179135,2.17425708743405,2.88030006257865,6.95224465381992,3.64905387522296,2.36235201479103,3.11809975146708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|short_description=p4@Siva1
}}

Latest revision as of 09:08, 26 September 2015

Short description:p4@Siva1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Siva1_5end
Coexpression cluster:MCL_coexpression_mm9:2770
Association with transcript: -143bp_to_ENSMUST00000021728, ENSMUST00000109755, NM_001161737, NM_013929, uc007pev.2, uc007pew.2_5end
EntrezGene:Siva1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Siva1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F113.95
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter1.07e-1229
regional part of telencephalon1.07e-1229
telencephalon1.07e-1229
gray matter2.78e-1234
regional part of forebrain1.09e-1139
forebrain1.09e-1139
future forebrain1.09e-1139
anterior neural tube1.68e-1140
cerebral cortex2.03e-1121
cerebral hemisphere2.03e-1121
pallium2.03e-1121
brain3.88e-1047
future brain3.88e-1047
pre-chordal neural plate5.71e-1049
regional part of brain1.10e-0946
neural tube3.22e-0952
neural rod3.22e-0952
future spinal cord3.22e-0952
neural keel3.22e-0952
regional part of cerebral cortex6.44e-0917
regional part of nervous system7.78e-0954
occipital lobe1.76e-0710
visual cortex1.76e-0710
neocortex1.76e-0710
thymus5.08e-0723
neck5.08e-0723
respiratory system epithelium5.08e-0723
hemolymphoid system gland5.08e-0723
pharyngeal epithelium5.08e-0723
thymic region5.08e-0723
pharyngeal gland5.08e-0723
entire pharyngeal arch endoderm5.08e-0723
thymus primordium5.08e-0723
early pharyngeal endoderm5.08e-0723
neurectoderm5.22e-0764
neural plate5.22e-0764
presumptive neural plate5.22e-0764
pharynx7.42e-0724
upper respiratory tract7.42e-0724
chordate pharynx7.42e-0724
pharyngeal arch system7.42e-0724
pharyngeal region of foregut7.42e-0724
gland of gut9.43e-0724
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