Personal tools

FFCP PHASE1:Mm9::chr7:25315836..25315860,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=210146
|EntrezGene=210146
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VIM9
|UniProt=Q8VIM9
|association_with_transcript=169bp_to_ENSMUST00000049020,NM_153134,uc009fpv.2_5end
|association_with_transcript=169bp_to_ENSMUST00000049020,NM_153134,uc009fpv.2_5end
|cluster_id=chr7:25315836..25315860,+
|description=CAGE_peak_3_at_Irgq_5end
|description=CAGE_peak_3_at_Irgq_5end
|id=chr7:25315836..25315860,+
|id=chr7:25315836..25315860,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,5.55e-08,3;CL:0002610,1.14e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.95e-13!52;UBERON:0005068!4.95e-13!52;UBERON:0006241!4.95e-13!52;UBERON:0007135!4.95e-13!52;UBERON:0000955!8.90e-13!50;UBERON:0006238!8.90e-13!50;UBERON:0002616!2.18e-12!49;UBERON:0000033!7.34e-11!63;UBERON:0001017!8.03e-11!73;UBERON:0005743!8.03e-11!73;UBERON:0004121!1.23e-10!102;UBERON:0000924!1.23e-10!102;UBERON:0006601!1.23e-10!102;UBERON:0002020!1.91e-10!34;UBERON:0000073!2.92e-10!75;UBERON:0001016!2.92e-10!75;UBERON:0003080!1.34e-09!40;UBERON:0002780!4.76e-09!39;UBERON:0001890!4.76e-09!39;UBERON:0006240!4.76e-09!39;UBERON:0002791!1.23e-08!29;UBERON:0003528!1.23e-08!29;UBERON:0001893!1.23e-08!29;UBERON:0002346!2.13e-08!71;UBERON:0003075!2.13e-08!71;UBERON:0007284!2.13e-08!71;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10;UBERON:0003056!2.07e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.24e-26,54;UBERON:0001049,1.45e-22,52;UBERON:0005068,1.45e-22,52;UBERON:0006241,1.45e-22,52;UBERON:0007135,1.45e-22,52;UBERON:0002346,1.55e-20,64;UBERON:0003075,1.55e-20,64;UBERON:0007284,1.55e-20,64;UBERON:0010371,2.28e-20,73;UBERON:0002616,5.23e-20,46;UBERON:0004121,1.62e-19,95;UBERON:0000924,1.62e-19,95;UBERON:0006601,1.62e-19,95;UBERON:0000955,1.85e-19,47;UBERON:0006238,1.85e-19,47;UBERON:0001017,7.00e-19,73;UBERON:0001016,3.45e-18,75;UBERON:0003080,3.34e-17,40;UBERON:0002021,7.30e-17,10;UBERON:0000411,7.30e-17,10;UBERON:0001950,7.30e-17,10;UBERON:0003056,1.80e-16,49;UBERON:0002780,8.32e-16,39;UBERON:0001890,8.32e-16,39;UBERON:0006240,8.32e-16,39;UBERON:0002020,6.83e-15,34;UBERON:0003528,4.87e-14,29;UBERON:0002791,4.87e-14,29;UBERON:0001893,4.87e-14,29;UBERON:0010314,2.48e-13,92;UBERON:0002619,4.14e-11,17;UBERON:0000956,1.85e-10,21;UBERON:0001869,1.85e-10,21;UBERON:0000203,1.85e-10,21;UBERON:0004111,6.10e-10,122;UBERON:0002950,7.73e-10,4;UBERON:0001891,7.73e-10,4;UBERON:0009616,7.73e-10,4;UBERON:0010286,7.73e-10,4;UBERON:0000025,1.95e-08,114;UBERON:0007023,3.85e-08,51;UBERON:0002038,5.55e-08,3;UBERON:0009663,5.55e-08,3;UBERON:0009661,5.55e-08,3;UBERON:0000125,5.55e-08,3;UBERON:0002308,5.55e-08,3;UBERON:0004684,1.14e-07,3;UBERON:0002275,1.14e-07,3
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.700837921786577,0,0,0.70219357896598,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0.919218786610021,9.91042928994498,1.78762273319263,3.5329502648936,0.131886287730194,0.0914876436024097,0.52091337055676,4.4669279840221,3.93933827022176,4.12555268997387,2.06240009831567,0.996601765593721,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.8850203613211,0,0,0,0.127070227073065,2.24685959107234,2.28750301409313,0.628271760564322,1.91206752211504,3.58001640262463,2.70124457927428,1.62241263067758,0.305518091550949,0.248813941220186,0.252722758433675,7.15502310014011,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0,0.351902248327898,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0.268412837520744,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.316182685621286,0,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,1.17080188714679,0.157635144106191,0.8858587585951,0.318909537314974,1.47476983244164,0.863424909329478,0.578596234326046,0,0,2.95058563811422,1.93155722413313,3.37156238974363,4.92289083687253,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,1.05418608574999,2.06271086496374,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,1.32317038832977,0.16488625294148,0.322928853391811,0.422190474497091,0.477489376012546,0.656563598980245,0,3.33765543618917,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.648032044930808,0.418176592028937,0.218362563746178,0.134864346384821,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.295379054349154,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0.233753804363138,1.36038230169127,0.443971906748129,0,0.167884616364078,0.386379188064381,0.750729901804728,0.73260649706906,1.71494703263253,0.501572104035363,3.3885110557024,5.06357760157895,1.14579102687879,3.09335728218638,1.37016503954128,3.0215755895588,4.72515750162264,0.45032120322422,4.53142408984205,1.55328093525546,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.661774257358546,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.700837921786577,0,0,0.70219357896598,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,0.571301968807607,1.10434270475807,0.122490799214954,0.383381884072945,0.919218786610021,9.91042928994498,1.78762273319263,3.5329502648936,0.131886287730194,0.0914876436024097,0.52091337055676,4.4669279840221,3.93933827022176,4.12555268997387,2.06240009831567,0.996601765593721,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.8850203613211,0,0,0,0.127070227073065,2.24685959107234,2.28750301409313,0.628271760564322,1.91206752211504,3.58001640262463,2.70124457927428,1.62241263067758,0.305518091550949,0.248813941220186,0.252722758433675,7.15502310014011,0,0,0,0,0,0,0.0937017245597288,1.29351685369508,0,0,0.351902248327898,0,0,0.696504333044333,0.61734640922383,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0.268412837520744,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.316182685621286,0,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,1.17080188714679,0.157635144106191,0.8858587585951,0.318909537314974,1.47476983244164,0.863424909329478,0.578596234326046,0,0,2.95058563811422,1.93155722413313,3.37156238974363,4.92289083687253,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,1.05418608574999,2.06271086496374,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,1.32317038832977,0.16488625294148,0.322928853391811,0.422190474497091,0.477489376012546,0.656563598980245,0,3.33765543618917,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.648032044930808,0.418176592028937,0.218362563746178,0.134864346384821,0.661227645802687,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.295379054349154,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0.233753804363138,1.36038230169127,0.443971906748129,0,0.167884616364078,0.386379188064381,0.750729901804728,0.73260649706906,1.71494703263253,0.501572104035363,3.3885110557024,5.06357760157895,1.14579102687879,3.09335728218638,1.37016503954128,3.0215755895588,4.72515750162264,0.45032120322422,4.53142408984205,1.55328093525546,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.661774257358546,0.463735671240843
|short_description=p3@Irgq
|short_description=p3@Irgq
}}
}}

Latest revision as of 09:39, 26 September 2015

Short description:p3@Irgq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Irgq_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 169bp_to_ENSMUST00000049020, NM_153134, uc009fpv.2_5end
EntrezGene:Irgq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Irgq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra5.55e-083
raphe nuclei neuron1.14e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.24e-2654
neural tube1.45e-2252
neural rod1.45e-2252
future spinal cord1.45e-2252
neural keel1.45e-2252
neurectoderm1.55e-2064
neural plate1.55e-2064
presumptive neural plate1.55e-2064
ecto-epithelium2.28e-2073
regional part of brain5.23e-2046
ectoderm-derived structure1.62e-1995
ectoderm1.62e-1995
presumptive ectoderm1.62e-1995
brain1.85e-1947
future brain1.85e-1947
central nervous system7.00e-1973
nervous system3.45e-1875
anterior neural tube3.34e-1740
occipital lobe7.30e-1710
visual cortex7.30e-1710
neocortex7.30e-1710
pre-chordal neural plate1.80e-1649
regional part of forebrain8.32e-1639
forebrain8.32e-1639
future forebrain8.32e-1639
gray matter6.83e-1534
brain grey matter4.87e-1429
regional part of telencephalon4.87e-1429
telencephalon4.87e-1429
structure with developmental contribution from neural crest2.48e-1392
regional part of cerebral cortex4.14e-1117
cerebral cortex1.85e-1021
cerebral hemisphere1.85e-1021
pallium1.85e-1021
anatomical conduit6.10e-10122
regional part of midbrain7.73e-104
midbrain7.73e-104
presumptive midbrain7.73e-104
midbrain neural tube7.73e-104
tube1.95e-08114
adult organism3.85e-0851
substantia nigra5.55e-083
telencephalic nucleus5.55e-083
midbrain nucleus5.55e-083
neural nucleus5.55e-083
nucleus of brain5.55e-083
raphe nuclei1.14e-073
reticular formation1.14e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:25315836..25315860,%2B&oldid=4246568"