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FFCP PHASE1:Mm9::chr6:107479711..107479774,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:107479711..107479774,+
|DHSsupport=NA
|short_description=p1@Lrrn1
|DPIdataset=NA
|description=CAGE_peak_1_at_Lrrn1_5end
|association_with_transcript=0bp_to_NM_008516_5end
|EntrezGene=16979
|EntrezGene=16979
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q61809
|UniProt=Q61809
|association_with_transcript=0bp_to_NM_008516_5end
|cluster_id=chr6:107479711..107479774,+
|description=CAGE_peak_1_at_Lrrn1_5end
|id=chr6:107479711..107479774,+
|ontology_enrichment_celltype=CL:0000540!1.99e-15!33;CL:0000047!1.99e-15!33;CL:0000031!1.99e-15!33;CL:0000404!1.99e-15!33;CL:0000117!8.45e-15!23;CL:0000337!8.45e-15!23;CL:0000221!2.31e-12!44;CL:0000133!2.31e-12!44;CL:0002319!3.83e-12!43;CL:0000393!1.05e-09!39;CL:0000211!1.05e-09!39;CL:0000055!2.31e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,8.09e-16,33;CL:0000047,8.09e-16,33;CL:0000031,8.09e-16,33;CL:0000404,8.09e-16,33;CL:0000117,3.58e-15,23;CL:0000337,3.58e-15,23;CL:0000221,1.62e-12,44;CL:0000133,1.62e-12,44;CL:0002319,2.71e-12,43;CL:0000393,2.77e-10,39;CL:0000211,2.77e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.89e-27!73;UBERON:0005743!1.89e-27!73;UBERON:0000073!1.47e-26!75;UBERON:0001016!1.47e-26!75;UBERON:0004121!1.60e-26!102;UBERON:0000924!1.60e-26!102;UBERON:0006601!1.60e-26!102;UBERON:0002346!6.50e-23!71;UBERON:0003075!6.50e-23!71;UBERON:0007284!6.50e-23!71;UBERON:0001049!3.98e-21!52;UBERON:0005068!3.98e-21!52;UBERON:0006241!3.98e-21!52;UBERON:0007135!3.98e-21!52;UBERON:0000033!1.15e-20!63;UBERON:0000955!1.05e-19!50;UBERON:0006238!1.05e-19!50;UBERON:0002616!3.82e-19!49;UBERON:0002020!9.62e-17!34;UBERON:0003056!1.39e-16!49;UBERON:0003080!1.09e-15!40;UBERON:0002780!4.19e-15!39;UBERON:0001890!4.19e-15!39;UBERON:0006240!4.19e-15!39;UBERON:0002791!1.44e-13!29;UBERON:0003528!1.44e-13!29;UBERON:0001893!1.44e-13!29;UBERON:0000468!9.39e-12!333;UBERON:0000956!1.98e-09!21;UBERON:0001869!1.98e-09!21;UBERON:0000203!1.98e-09!21;UBERON:0000153!3.71e-09!94;UBERON:0000922!4.93e-08!328;UBERON:0007811!7.23e-08!86;UBERON:0002619!2.20e-07!17;UBERON:0000479!9.15e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-28,73;UBERON:0001016,4.38e-27,75;UBERON:0004121,7.30e-26,95;UBERON:0000924,7.30e-26,95;UBERON:0006601,7.30e-26,95;UBERON:0002346,2.20e-23,64;UBERON:0003075,2.20e-23,64;UBERON:0007284,2.20e-23,64;UBERON:0000073,3.40e-23,54;UBERON:0001049,8.23e-22,52;UBERON:0005068,8.23e-22,52;UBERON:0006241,8.23e-22,52;UBERON:0007135,8.23e-22,52;UBERON:0010371,2.15e-21,73;UBERON:0000955,2.68e-18,47;UBERON:0006238,2.68e-18,47;UBERON:0002616,9.85e-18,46;UBERON:0002020,3.59e-17,34;UBERON:0003056,5.26e-17,49;UBERON:0003080,4.38e-16,40;UBERON:0002780,1.74e-15,39;UBERON:0001890,1.74e-15,39;UBERON:0006240,1.74e-15,39;UBERON:0003528,6.61e-14,29;UBERON:0002791,6.61e-14,29;UBERON:0001893,6.61e-14,29;UBERON:0010314,9.26e-13,92;UBERON:0000956,1.19e-09,21;UBERON:0001869,1.19e-09,21;UBERON:0000203,1.19e-09,21;UBERON:0002619,1.51e-07,17
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|short_description=p1@Lrrn1
}}
}}

Latest revision as of 10:39, 26 September 2015

Short description:p1@Lrrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrn1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_NM_008516_5end
EntrezGene:Lrrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C378.50
Mouse Granule cells, donor2.CNhs12357.11731-123E359.25
Mouse Granule cells, donor3.CNhs12108.11636-122C7112.19
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F544.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F155.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D567.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D352.86
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.23
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D762.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I665.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D657.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F648.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E167.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F95.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D712.02
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I341.97
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F528.96
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B258.56
cerebellum, neonate N30.CNhs11135.1395-42I281.06
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A448.68
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F125.13
cortex, adult.CNhs10473.12-14D538.07
cortex, neonate N30.CNhs11107.1392-42F230.69
diencephalon, adult.CNhs10482.20-12F251.74
diencephalon, neonate N30.CNhs11201.1388-42B248.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C614.57
eyeball, embryo E14.CNhs10521.399-16E219.31
eyeball, embryo E15.CNhs10593.426-16C929.35
eyeball, embryo E17.CNhs11023.1261-18D422.30
eyeball, neonate N00.CNhs11207.633-15C620.68
eyeball, neonate N01.CNhs11140.1532-43E717.30
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E213.15
forelimb, embryo E12.CNhs10600.359-14H225.34
forelimb, embryo E13.CNhs10589.384-1E230.62
forelimb, embryo E14.CNhs10577.413-26A830.69
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C423.33
forelimb, embryo E18.CNhs11008.1520-43B518.11
gonad, embryo E13.CNhs11044.1564-45I618.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E857.41
hippocampus, neonate N00.CNhs11228.627-43G128.09
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E914.00
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F222.68
intestine, neonate N10.CNhs11098.755-23A518.72
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D54.68
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A69.55
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C268.39
medulla oblongata, neonate N30.CNhs11200.1396-42A376.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.90
olfactory brain, adult.CNhs10489.18-22I940.81
ovary, adult.CNhs10507.91-2I733.92
ovary, embryo E18.CNhs11040.505-44H718.16
ovary, neonate N00.CNhs11217.1299-22I421.83
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E441.15
pancreas, embryo E14.CNhs11012.405-44F410.68
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D818.18
pancreas, neonate N16.CNhs11136.787-43B628.76
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G827.24
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C77.24
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F619.80
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E923.44
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G420.83
skin, neonate N03.CNhs11215.662-22H311.58
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C975.84
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E36.48
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B77.16
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I821.59
whole body, embryo E12.CNhs10587.857-27C951.47
whole body, embryo E13.CNhs10512.372-23H224.07
whole body, embryo E14.5.CNhs10578.420-27D226.01
whole body, embryo E14.CNhs10519.395-14B116.14
whole body, embryo E16.CNhs10514.453-14F215.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.20
whole body, embryo E17.5.CNhs10513.490-9F923.92
whole body, embryo E17.CNhs10517.475-3I524.23
whole body, embryo E18.CNhs10516.493-3B324.33
whole body, neonate N00.CNhs10525.657-19C218.48
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D123.38
whole body, neonate N10.CNhs10518.761-6B423.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.09e-1633
neuronal stem cell8.09e-1633
neuroblast8.09e-1633
electrically signaling cell8.09e-1633
CNS neuron (sensu Vertebrata)3.58e-1523
neuroblast (sensu Vertebrata)3.58e-1523
ectodermal cell1.62e-1244
neurectodermal cell1.62e-1244
neural cell2.71e-1243
electrically responsive cell2.77e-1039
electrically active cell2.77e-1039

Uber anatomy
Ontology termp-valuen
central nervous system2.58e-2873
nervous system4.38e-2775
ectoderm-derived structure7.30e-2695
ectoderm7.30e-2695
presumptive ectoderm7.30e-2695
neurectoderm2.20e-2364
neural plate2.20e-2364
presumptive neural plate2.20e-2364
regional part of nervous system3.40e-2354
neural tube8.23e-2252
neural rod8.23e-2252
future spinal cord8.23e-2252
neural keel8.23e-2252
ecto-epithelium2.15e-2173
brain2.68e-1847
future brain2.68e-1847
regional part of brain9.85e-1846
gray matter3.59e-1734
pre-chordal neural plate5.26e-1749
anterior neural tube4.38e-1640
regional part of forebrain1.74e-1539
forebrain1.74e-1539
future forebrain1.74e-1539
brain grey matter6.61e-1429
regional part of telencephalon6.61e-1429
telencephalon6.61e-1429
structure with developmental contribution from neural crest9.26e-1392
cerebral cortex1.19e-0921
cerebral hemisphere1.19e-0921
pallium1.19e-0921
regional part of cerebral cortex1.51e-0717
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