FFCP PHASE1:Mm9::chr17:36034024..36034086,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69662 | |EntrezGene=69662 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B8JJ66,B8JJ68 | |UniProt=B8JJ66,B8JJ68 | ||
|association_with_transcript=0bp_to_ENSMUST00000146451,ENSMUST00000148482,ENSMUST00000156817,uc008cix.1,uc008ciy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000146451,ENSMUST00000148482,ENSMUST00000156817,uc008cix.1,uc008ciy.1_5end | ||
|cluster_id=chr17:36034024..36034086,- | |||
|description=CAGE_peak_2_at_2310061I04Rik_5end | |description=CAGE_peak_2_at_2310061I04Rik_5end | ||
|id=chr17:36034024..36034086,- | |id=chr17:36034024..36034086,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.41e-15!52;UBERON:0005068!9.41e-15!52;UBERON:0006241!9.41e-15!52;UBERON:0007135!9.41e-15!52;UBERON:0001017!6.77e-12!73;UBERON:0005743!6.77e-12!73;UBERON:0000955!9.88e-12!50;UBERON:0006238!9.88e-12!50;UBERON:0002020!1.59e-11!34;UBERON:0002616!2.75e-11!49;UBERON:0002346!5.36e-11!71;UBERON:0003075!5.36e-11!71;UBERON:0007284!5.36e-11!71;UBERON:0000033!1.07e-10!63;UBERON:0003080!1.13e-10!40;UBERON:0000073!1.18e-10!75;UBERON:0001016!1.18e-10!75;UBERON:0002780!3.94e-10!39;UBERON:0001890!3.94e-10!39;UBERON:0006240!3.94e-10!39;UBERON:0003056!5.63e-10!49;UBERON:0002791!4.78e-09!29;UBERON:0003528!4.78e-09!29;UBERON:0001893!4.78e-09!29;UBERON:0007811!5.80e-08!86;UBERON:0000153!1.05e-07!94;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0002619!4.37e-07!17;UBERON:0000956!4.42e-07!21;UBERON:0001869!4.42e-07!21;UBERON:0000203!4.42e-07!21;UBERON:0004121!5.37e-07!102;UBERON:0000924!5.37e-07!102;UBERON:0006601!5.37e-07!102 | |ontology_enrichment_uberon=UBERON:0001049!9.41e-15!52;UBERON:0005068!9.41e-15!52;UBERON:0006241!9.41e-15!52;UBERON:0007135!9.41e-15!52;UBERON:0001017!6.77e-12!73;UBERON:0005743!6.77e-12!73;UBERON:0000955!9.88e-12!50;UBERON:0006238!9.88e-12!50;UBERON:0002020!1.59e-11!34;UBERON:0002616!2.75e-11!49;UBERON:0002346!5.36e-11!71;UBERON:0003075!5.36e-11!71;UBERON:0007284!5.36e-11!71;UBERON:0000033!1.07e-10!63;UBERON:0003080!1.13e-10!40;UBERON:0000073!1.18e-10!75;UBERON:0001016!1.18e-10!75;UBERON:0002780!3.94e-10!39;UBERON:0001890!3.94e-10!39;UBERON:0006240!3.94e-10!39;UBERON:0003056!5.63e-10!49;UBERON:0002791!4.78e-09!29;UBERON:0003528!4.78e-09!29;UBERON:0001893!4.78e-09!29;UBERON:0007811!5.80e-08!86;UBERON:0000153!1.05e-07!94;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10;UBERON:0002619!4.37e-07!17;UBERON:0000956!4.42e-07!21;UBERON:0001869!4.42e-07!21;UBERON:0000203!4.42e-07!21;UBERON:0004121!5.37e-07!102;UBERON:0000924!5.37e-07!102;UBERON:0006601!5.37e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.29e-15,52;UBERON:0005068,9.29e-15,52;UBERON:0006241,9.29e-15,52;UBERON:0007135,9.29e-15,52;UBERON:0000073,9.43e-14,54;UBERON:0002346,8.46e-13,64;UBERON:0003075,8.46e-13,64;UBERON:0007284,8.46e-13,64;UBERON:0000955,2.66e-12,47;UBERON:0006238,2.66e-12,47;UBERON:0001017,6.70e-12,73;UBERON:0002616,7.61e-12,46;UBERON:0002020,1.57e-11,34;UBERON:0010314,6.70e-11,92;UBERON:0003080,1.12e-10,40;UBERON:0001016,1.25e-10,75;UBERON:0002780,3.90e-10,39;UBERON:0001890,3.90e-10,39;UBERON:0006240,3.90e-10,39;UBERON:0003056,5.58e-10,49;UBERON:0010371,2.32e-09,73;UBERON:0003528,4.75e-09,29;UBERON:0002791,4.75e-09,29;UBERON:0001893,4.75e-09,29;UBERON:0004121,7.36e-08,95;UBERON:0000924,7.36e-08,95;UBERON:0006601,7.36e-08,95;UBERON:0002021,2.51e-07,10;UBERON:0000411,2.51e-07,10;UBERON:0001950,2.51e-07,10;UBERON:0002619,4.35e-07,17;UBERON:0000956,4.40e-07,21;UBERON:0001869,4.40e-07,21;UBERON:0000203,4.40e-07,21 | |||
|phase1_expression=3.20297694209588,0.348975407639361,0,1.20985684522732,0.500895729946347,1.17515490338323,1.16806320297763,3.48632973292256,8.30653460694834,8.89445200023575,18.4915405683545,20.5014448618015,4.62241970814255,5.68232615723483,4.66353666541928,2.02475267389826,0.699561878128147,1.89277299214943,1.91960207048034,1.69755860719212,6.63337663178344,6.25532992565577,5.74639536105658,1.27993938234725,1.60586496747019,0,1.29228598847722,1.29282739611533,1.14014051673824,1.26015064879965,1.10865255327652,5.08024538767705,3.69038872550742,0,2.3108129580102,2.1610503896604,1.83752420636132,0,0,0,0,0,0.485510353031154,1.88845226963366,2.83855407414641,4.40512205188036,6.25913075478431,6.75877984779384,4.17403747195497,4.6663175777828,4.05960622713551,5.75010257459886,1.00669563634642,2.90144856804538,3.02484419228218,0.771778308107841,1.14613375975503,1.03134418455488,11.5320382689971,12.6957835025288,10.775133859605,1.35537812827653,6.22506357277798,0.899899717281399,0.988866362566974,2.1314403448383,2.99600110518405,7.68436610643109,5.80661828927475,4.72520784160917,4.20649922702764,13.4255962669788,9.93908434282261,4.5321595709533,3.73797336971122,9.19218786610021,4.40463523997555,4.85211884723713,3.68655679814984,11.4741070325269,9.69769022185542,10.4182674111352,5.02529398202486,4.50210088025344,5.50073691996516,14.142172102736,11.9592211871246,10.8111678578674,1.36307147999731,0.831287161174641,1.73918693221007,6.0229671388697,1.3599426674155,2.69851595818909,12.3457519315057,17.4730485967961,8.70755404816862,0.340860645156116,0.519572009205738,0.70667914902068,2.53518155598025,0,0,0,3.46385665617943,4.30711771307668,2.02209778005913,5.59501010623394,3.88406825470758,4.00793775475027,5.20455980298408,2.43572382649713,2.07553947530453,2.26083960828934,3.52766121407114,4.52399728786832,0.988779870937496,11.7125479105128,3.5384422077995,5.01477234836968,7.95029466457417,5.33362778448744,5.59175283654366,9.66176630138106,7.33063473847093,1.27728527604296,1.7972268675888,1.79970819298022,2.41433431438823,13.9305294646485,12.8100168789215,24.12563560567,12.6891753740362,10.4843337505436,10.8049783170971,8.92326946872667,3.46253837091075,3.6078021476927,3.28539585963777,4.62972082950243,7.41686524887411,8.04657365517155,7.38254732201932,4.37043971723574,3.26575195926374,4.86832137082429,3.18585863503078,3.3631438196072,5.17363183038821,8.50977360755187,6.862093842394,6.57587197282724,3.05851974148158,2.78601733217733,1.85203922767149,11.5439874754726,5.61770549850588,2.31613116403244,1.98914449576915,8.90640821902658,3.75241695969754,3.06105504483725,4.02466050494857,4.52557733019029,4.01094493507183,5.11574678450897,5.633741429392,5.25444040652263,6.08871444679878,8.04420573987567,9.48505071686512,12.1345989563026,14.0512073786272,12.6154033634749,10.9350773253346,16.6705472054441,1.98251269790279,3.43785736662608,7.89166526980366,6.73486348395272,5.28356591420583,2.42020229548011,2.00140239460383,1.90225626112559,1.42358718463353,1.97638745668813,1.00534083520108,1.59165177632921,1.55971269695296,0,1.94524244887225,1.99141273254367,11.569741958138,6.28366819353509,6.76246414038483,5.90588850751411,5.04276466635827,4.62896411276103,7.46191138066236,9.74226976665374,7.22194148070324,7.15703550746443,9.48648406678877,4.17112764290235,6.2898878436225,3.82265591054251,3.24576194221605,1.92941727801933,2.80088436959562,3.74004978686054,3.89124544260085,2.19649130550465,8.62609239164127,2.23284568601102,4.05648975048929,4.54641980304801,5.02312757861354,6.75420929908714,1.66277871149944,4.73728529426212,4.07412441105065,3.56464680127895,0.938760993154008,0.837531287209079,0.714130922658041,1.36593553500459,1.26108115284953,0.664394068946325,0.956728611944923,1.47476983244164,1.89953480052485,0.578596234326046,3.01582567878545,1.63171705145613,1.47529281905711,3.58717770196152,7.22477654945064,7.03270119553219,1.14754461763673,16.6630811954886,2.83957397474631,3.51394869866975,2.15423397732799,3.34556317133573,3.11918143715352,2.83076530788832,2.83367491172426,2.04579100537918,2.37172666767914,10.9249247583414,3.97432238583152,8.01295216502649,6.02681749608232,5.44401405809367,2.65490276679926,6.79785781233948,4.53485335447127,1.69744571780308,3.2483208216885,3.3817866273832,1.80899805217755,1.45413491791002,2.49548164869305,3.79244109522979,2.10837217149998,6.18813259489121,3.74483566329167,7.92268813737765,10.8661294377514,7.93047029616891,9.75371285032505,4.99432689285798,5.92376474167636,2.13125464380219,4.69343416127421,5.93129798418696,3.52845436887939,3.79238381765404,3.22928853391811,2.17126529741361,1.07435109602823,1.80554989719567,2.04036585640896,9.45669040253599,3.58828849675491,2.47664241555867,2.40752885580625,2.0720530270516,2.59719032669948,1.83022538565218,2.03974115992626,1.95932033253121,2.07299960706636,3.81868247206045,9.33191181064349,5.89626454667861,3.13215488383224,4.18176592028937,1.31017538247707,2.56242258131159,1.57041565878138,1.30877970992015,2.20345454596048,3.10669656543463,10.1464728963154,12.2603567756063,12.7403037651965,10.1114617938905,5.42471258606471,10.4752797804282,6.80671984145373,7.68205870579306,15.0997455973024,9.66336483304024,12.3852902690882,3.79213344753814,6.68993210457542,6.47079030138412,6.75588279484534,5.72885426135941,2.18549490259391,3.24527713703916,2.65841148914239,3.43285929823702,2.81965184623499,2.92395936896837,2.43644701849381,2.11666051608725,1.5193997283604,12.923631866067,11.5432695754514,12.4702260687171,10.744615447301,2.12508553435409,1.68914227906064,4.39563898241436,1.2862102744744,2.50786052017682,19.2015626489803,21.1749608793301,18.3326564300607,25.2624178045221,15.7568979547248,12.0863023582352,14.1754725048679,12.6089936902782,8.15656336171568,15.5328093525546,6.64239024538731,8.77854721482268,5.29274177837816,8.265628380322,6.49800804146745,7.72142735490059,8.00088220085815,8.65347240403356,7.38114182061175,9.09709962349671,7.60437899670719,8.11093267960128,7.11675456771106,6.21043978327232,6.60507892989553,8.09699275181225,6.2577536010222,5.98018583437486,11.1263193216893,7.06554816645107,7.20025430009372,4.2594193478241,5.96090474868302,7.99405291477807,5.74067220533517,6.76916863133412,5.48783918618318,7.3659519202596,5.29636043998861,7.85599180320834,4.98267076121531,7.48634066054282,8.18462086339379,6.19747364743864,4.82266527452853,6.99469618226249,7.25187986180766,8.59484216193193,5.92993829413414,7.0589254118245,8.34724208233517 | |phase1_expression=3.20297694209588,0.348975407639361,0,1.20985684522732,0.500895729946347,1.17515490338323,1.16806320297763,3.48632973292256,8.30653460694834,8.89445200023575,18.4915405683545,20.5014448618015,4.62241970814255,5.68232615723483,4.66353666541928,2.02475267389826,0.699561878128147,1.89277299214943,1.91960207048034,1.69755860719212,6.63337663178344,6.25532992565577,5.74639536105658,1.27993938234725,1.60586496747019,0,1.29228598847722,1.29282739611533,1.14014051673824,1.26015064879965,1.10865255327652,5.08024538767705,3.69038872550742,0,2.3108129580102,2.1610503896604,1.83752420636132,0,0,0,0,0,0.485510353031154,1.88845226963366,2.83855407414641,4.40512205188036,6.25913075478431,6.75877984779384,4.17403747195497,4.6663175777828,4.05960622713551,5.75010257459886,1.00669563634642,2.90144856804538,3.02484419228218,0.771778308107841,1.14613375975503,1.03134418455488,11.5320382689971,12.6957835025288,10.775133859605,1.35537812827653,6.22506357277798,0.899899717281399,0.988866362566974,2.1314403448383,2.99600110518405,7.68436610643109,5.80661828927475,4.72520784160917,4.20649922702764,13.4255962669788,9.93908434282261,4.5321595709533,3.73797336971122,9.19218786610021,4.40463523997555,4.85211884723713,3.68655679814984,11.4741070325269,9.69769022185542,10.4182674111352,5.02529398202486,4.50210088025344,5.50073691996516,14.142172102736,11.9592211871246,10.8111678578674,1.36307147999731,0.831287161174641,1.73918693221007,6.0229671388697,1.3599426674155,2.69851595818909,12.3457519315057,17.4730485967961,8.70755404816862,0.340860645156116,0.519572009205738,0.70667914902068,2.53518155598025,0,0,0,3.46385665617943,4.30711771307668,2.02209778005913,5.59501010623394,3.88406825470758,4.00793775475027,5.20455980298408,2.43572382649713,2.07553947530453,2.26083960828934,3.52766121407114,4.52399728786832,0.988779870937496,11.7125479105128,3.5384422077995,5.01477234836968,7.95029466457417,5.33362778448744,5.59175283654366,9.66176630138106,7.33063473847093,1.27728527604296,1.7972268675888,1.79970819298022,2.41433431438823,13.9305294646485,12.8100168789215,24.12563560567,12.6891753740362,10.4843337505436,10.8049783170971,8.92326946872667,3.46253837091075,3.6078021476927,3.28539585963777,4.62972082950243,7.41686524887411,8.04657365517155,7.38254732201932,4.37043971723574,3.26575195926374,4.86832137082429,3.18585863503078,3.3631438196072,5.17363183038821,8.50977360755187,6.862093842394,6.57587197282724,3.05851974148158,2.78601733217733,1.85203922767149,11.5439874754726,5.61770549850588,2.31613116403244,1.98914449576915,8.90640821902658,3.75241695969754,3.06105504483725,4.02466050494857,4.52557733019029,4.01094493507183,5.11574678450897,5.633741429392,5.25444040652263,6.08871444679878,8.04420573987567,9.48505071686512,12.1345989563026,14.0512073786272,12.6154033634749,10.9350773253346,16.6705472054441,1.98251269790279,3.43785736662608,7.89166526980366,6.73486348395272,5.28356591420583,2.42020229548011,2.00140239460383,1.90225626112559,1.42358718463353,1.97638745668813,1.00534083520108,1.59165177632921,1.55971269695296,0,1.94524244887225,1.99141273254367,11.569741958138,6.28366819353509,6.76246414038483,5.90588850751411,5.04276466635827,4.62896411276103,7.46191138066236,9.74226976665374,7.22194148070324,7.15703550746443,9.48648406678877,4.17112764290235,6.2898878436225,3.82265591054251,3.24576194221605,1.92941727801933,2.80088436959562,3.74004978686054,3.89124544260085,2.19649130550465,8.62609239164127,2.23284568601102,4.05648975048929,4.54641980304801,5.02312757861354,6.75420929908714,1.66277871149944,4.73728529426212,4.07412441105065,3.56464680127895,0.938760993154008,0.837531287209079,0.714130922658041,1.36593553500459,1.26108115284953,0.664394068946325,0.956728611944923,1.47476983244164,1.89953480052485,0.578596234326046,3.01582567878545,1.63171705145613,1.47529281905711,3.58717770196152,7.22477654945064,7.03270119553219,1.14754461763673,16.6630811954886,2.83957397474631,3.51394869866975,2.15423397732799,3.34556317133573,3.11918143715352,2.83076530788832,2.83367491172426,2.04579100537918,2.37172666767914,10.9249247583414,3.97432238583152,8.01295216502649,6.02681749608232,5.44401405809367,2.65490276679926,6.79785781233948,4.53485335447127,1.69744571780308,3.2483208216885,3.3817866273832,1.80899805217755,1.45413491791002,2.49548164869305,3.79244109522979,2.10837217149998,6.18813259489121,3.74483566329167,7.92268813737765,10.8661294377514,7.93047029616891,9.75371285032505,4.99432689285798,5.92376474167636,2.13125464380219,4.69343416127421,5.93129798418696,3.52845436887939,3.79238381765404,3.22928853391811,2.17126529741361,1.07435109602823,1.80554989719567,2.04036585640896,9.45669040253599,3.58828849675491,2.47664241555867,2.40752885580625,2.0720530270516,2.59719032669948,1.83022538565218,2.03974115992626,1.95932033253121,2.07299960706636,3.81868247206045,9.33191181064349,5.89626454667861,3.13215488383224,4.18176592028937,1.31017538247707,2.56242258131159,1.57041565878138,1.30877970992015,2.20345454596048,3.10669656543463,10.1464728963154,12.2603567756063,12.7403037651965,10.1114617938905,5.42471258606471,10.4752797804282,6.80671984145373,7.68205870579306,15.0997455973024,9.66336483304024,12.3852902690882,3.79213344753814,6.68993210457542,6.47079030138412,6.75588279484534,5.72885426135941,2.18549490259391,3.24527713703916,2.65841148914239,3.43285929823702,2.81965184623499,2.92395936896837,2.43644701849381,2.11666051608725,1.5193997283604,12.923631866067,11.5432695754514,12.4702260687171,10.744615447301,2.12508553435409,1.68914227906064,4.39563898241436,1.2862102744744,2.50786052017682,19.2015626489803,21.1749608793301,18.3326564300607,25.2624178045221,15.7568979547248,12.0863023582352,14.1754725048679,12.6089936902782,8.15656336171568,15.5328093525546,6.64239024538731,8.77854721482268,5.29274177837816,8.265628380322,6.49800804146745,7.72142735490059,8.00088220085815,8.65347240403356,7.38114182061175,9.09709962349671,7.60437899670719,8.11093267960128,7.11675456771106,6.21043978327232,6.60507892989553,8.09699275181225,6.2577536010222,5.98018583437486,11.1263193216893,7.06554816645107,7.20025430009372,4.2594193478241,5.96090474868302,7.99405291477807,5.74067220533517,6.76916863133412,5.48783918618318,7.3659519202596,5.29636043998861,7.85599180320834,4.98267076121531,7.48634066054282,8.18462086339379,6.19747364743864,4.82266527452853,6.99469618226249,7.25187986180766,8.59484216193193,5.92993829413414,7.0589254118245,8.34724208233517 | ||
|short_description=p2@2310061I04Rik | |short_description=p2@2310061I04Rik | ||
}} | }} |
Latest revision as of 10:56, 26 September 2015
Short description: | p2@2310061I04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2310061I04Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000146451, ENSMUST00000148482, ENSMUST00000156817, uc008cix.1, uc008ciy.1_5end |
EntrezGene: | 2310061I04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 9.29e-15 | 52 |
neural rod | 9.29e-15 | 52 |
future spinal cord | 9.29e-15 | 52 |
neural keel | 9.29e-15 | 52 |
regional part of nervous system | 9.43e-14 | 54 |
neurectoderm | 8.46e-13 | 64 |
neural plate | 8.46e-13 | 64 |
presumptive neural plate | 8.46e-13 | 64 |
brain | 2.66e-12 | 47 |
future brain | 2.66e-12 | 47 |
central nervous system | 6.70e-12 | 73 |
regional part of brain | 7.61e-12 | 46 |
gray matter | 1.57e-11 | 34 |
structure with developmental contribution from neural crest | 6.70e-11 | 92 |
anterior neural tube | 1.12e-10 | 40 |
nervous system | 1.25e-10 | 75 |
regional part of forebrain | 3.90e-10 | 39 |
forebrain | 3.90e-10 | 39 |
future forebrain | 3.90e-10 | 39 |
pre-chordal neural plate | 5.58e-10 | 49 |
ecto-epithelium | 2.32e-09 | 73 |
brain grey matter | 4.75e-09 | 29 |
regional part of telencephalon | 4.75e-09 | 29 |
telencephalon | 4.75e-09 | 29 |
ectoderm-derived structure | 7.36e-08 | 95 |
ectoderm | 7.36e-08 | 95 |
presumptive ectoderm | 7.36e-08 | 95 |
occipital lobe | 2.51e-07 | 10 |
visual cortex | 2.51e-07 | 10 |
neocortex | 2.51e-07 | 10 |
regional part of cerebral cortex | 4.35e-07 | 17 |
cerebral cortex | 4.40e-07 | 21 |
cerebral hemisphere | 4.40e-07 | 21 |
pallium | 4.40e-07 | 21 |