Personal tools

FFCP PHASE1:Mm9::chr12:120477144..120477164,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320910
|EntrezGene=320910
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=78bp_to_ENSMUST00000137804_5end
|association_with_transcript=78bp_to_ENSMUST00000137804_5end
|cluster_id=chr12:120477144..120477164,-
|description=CAGE_peak_4_at_Itgb8_5end
|description=CAGE_peak_4_at_Itgb8_5end
|id=chr12:120477144..120477164,-
|id=chr12:120477144..120477164,-
|ontology_enrichment_celltype=CL:0000221!3.78e-08!44;CL:0000133!3.78e-08!44;CL:0002319!1.30e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000221,1.55e-08,44;CL:0000133,1.55e-08,44;CL:0002319,6.85e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.82e-22!102;UBERON:0000924!3.82e-22!102;UBERON:0006601!3.82e-22!102;UBERON:0000033!5.18e-22!63;UBERON:0000073!7.71e-21!75;UBERON:0001016!7.71e-21!75;UBERON:0001017!1.02e-19!73;UBERON:0005743!1.02e-19!73;UBERON:0001049!7.19e-19!52;UBERON:0005068!7.19e-19!52;UBERON:0006241!7.19e-19!52;UBERON:0007135!7.19e-19!52;UBERON:0002346!4.04e-18!71;UBERON:0003075!4.04e-18!71;UBERON:0007284!4.04e-18!71;UBERON:0000955!1.35e-17!50;UBERON:0006238!1.35e-17!50;UBERON:0002616!6.87e-17!49;UBERON:0003056!2.44e-16!49;UBERON:0002020!1.85e-14!34;UBERON:0003080!2.99e-13!40;UBERON:0002780!1.01e-12!39;UBERON:0001890!1.01e-12!39;UBERON:0006240!1.01e-12!39;UBERON:0002791!3.55e-12!29;UBERON:0003528!3.55e-12!29;UBERON:0001893!3.55e-12!29;UBERON:0000153!2.84e-10!94;UBERON:0007811!5.14e-10!86;UBERON:0000956!2.51e-09!21;UBERON:0001869!2.51e-09!21;UBERON:0000203!2.51e-09!21;UBERON:0002619!1.14e-08!17;UBERON:0004111!4.97e-08!122;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10;UBERON:0000025!3.39e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.01e-24,95;UBERON:0000924,3.01e-24,95;UBERON:0006601,3.01e-24,95;UBERON:0001016,5.65e-23,75;UBERON:0002346,4.83e-22,64;UBERON:0003075,4.83e-22,64;UBERON:0007284,4.83e-22,64;UBERON:0001017,1.37e-21,73;UBERON:0000073,1.50e-20,54;UBERON:0010371,3.20e-20,73;UBERON:0001049,5.87e-20,52;UBERON:0005068,5.87e-20,52;UBERON:0006241,5.87e-20,52;UBERON:0007135,5.87e-20,52;UBERON:0003056,1.98e-17,49;UBERON:0000955,4.51e-17,47;UBERON:0006238,4.51e-17,47;UBERON:0002020,2.77e-16,34;UBERON:0010314,3.12e-16,92;UBERON:0002616,3.15e-16,46;UBERON:0003080,1.54e-13,40;UBERON:0003528,2.25e-13,29;UBERON:0002791,2.25e-13,29;UBERON:0001893,2.25e-13,29;UBERON:0002780,6.76e-13,39;UBERON:0001890,6.76e-13,39;UBERON:0006240,6.76e-13,39;UBERON:0000956,1.04e-09,21;UBERON:0001869,1.04e-09,21;UBERON:0000203,1.04e-09,21;UBERON:0002021,2.26e-09,10;UBERON:0000411,2.26e-09,10;UBERON:0001950,2.26e-09,10;UBERON:0002619,2.72e-09,17;UBERON:0003076,2.27e-07,12;UBERON:0003057,2.27e-07,12
|phase1_expression=3.84357233051505,0.348975407639361,0,0,0,0.503637815735669,0,2.06597317506522,0,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,2.38121212422995,0,0,0.319984845586813,1.60586496747019,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,3.2703773457067,1.09843091367236,3.30530828426282,2.51975558925653,4.31257693094915,0,2.17608642603403,0,0.771778308107841,0.573066879877513,1.03134418455488,1.82084814773638,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,4.19440154725767,8.4528027170742,0.725827286159344,1.75507719831198,1.26194976810829,2.57085885963423,3.09215957332259,1.34739879136449,0.958454710182364,0.919218786610021,1.10115880999389,3.31987079021488,3.37934373163736,1.45074916503213,1.73826522844578,1.56274011167028,3.07101298901519,3.93933827022176,3.20876320331301,5.00868595305235,4.27115042397309,2.05039390407831,2.49896437999507,8.23730005163962,2.89864488701678,0,0,0,0,0,0.842666520790511,0,0,0,15.7744630149882,0,0,0,0,0,0,2.05530983494308,1.03575153458869,1.1875371125186,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,1.29347577849275,0,0.988779870937496,1.15679485535929,0,1.13236794963186,0.220841518460394,0.969750506270444,0,3.22058876712702,5.65506108396329,0,0,0,0,4.04434726393021,6.40500843946077,1.63350657746724,7.30062144807561,7.16003280524926,6.2336413367868,3.56930778749067,2.64782346010822,0.622034853050465,0.758168275301024,1.89397670297827,3.12289063110489,1.14951052216736,2.52086981727489,1.35634336052144,2.99360596265843,3.58718416797579,2.34254311399322,1.81092359517311,0.215567992932842,1.32374256117473,0.703804496655795,0.876782929710299,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0.946978942340841,1.37734962223183,0.462801338662135,1.16266972375204,0.536546802799238,0.583826711835847,0.987359099480883,0.656669856316381,0.972825714550269,1.02339991197733,0.439100230582101,1.20785776884335,9.04246778825747,3.49875682089567,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.201683524623343,0,1.14135375667535,0,0.494096864172033,0.754005626400808,0,0.19496408711912,0,0,0.995706366271836,0.948339504765408,0.571242563048644,0,0.610953983535943,0.969762435838129,1.82353131714828,1.83385957660346,3.98547399544926,4.55296310739987,5.05928372079382,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,1.13694847062291,0.977789858652155,0.169745085775188,1.17345124144251,0.670025029767263,0.714130922658041,0.195133647857799,0.945810864637146,1.32878813789265,1.11618338060241,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0.275936746304732,7.38532713943843,4.80567915028033,0.491804836130026,0.252470927204373,0,0.390438744296638,0.215423397732799,0,1.33679204449436,0.283076530788832,1.21443210502468,0.584511715822624,0,14.4594592389813,0.99358059645788,1.24645922567079,2.60619134965722,2.14461159864296,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,0,3.06395645178409,1.08036656418786,0.776152102696527,0.643011105094777,0.532020700926821,1.24858172321449,1.64549020602121,0.304464949114599,0,3.81297727554876,0.661585194164886,1.6488625294148,0.807322133479528,0.663442174209714,0.596861720015682,0.820704498725306,0.582961673259701,5.56275906031529,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.87345025498471,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,0.621339313086926,0,2.24274819065968,2.81279433777066,4.4723773319131,4.00395452780966,3.37912250981556,7.15879155739099,3.1249052362548,2.09718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,1.15913756419314,3.00291960721891,2.56412273974171,1.71494703263253,0,7.90652579663893,5.9842280745933,7.44764167471216,5.15559547031063,7.53590771747707,4.5323633843382,6.75022500231806,6.75481804836331,3.62513927187364,5.69536342927002,0.415149390336707,0.798049746802062,1.87806966329548,0.486213434136588,1.25767897576789,1.2869045591501,0.44449345560323,0.618105171716683,2.24643446714271,1.51618327058278,0.50695859978048,0.754505365544305,1.03005658216871,1.15245274328765,1.55075766180156,0.476293691283074,0.927074607558844,0.77163688185482,0,1.03039244094078,1.02860775715625,0.70990322463735,1.66905332963125,1.45346416632329,1.12931256498397,1.26921911837515,0.73171189149109,1.31534855718921,1.49384525230448,0.561142271657738,0.949080144993393,0.985044823755635,0.818462086339379,1.54936841185966,1.73615949883027,1.24905288968973,0.935726433781634,1.07435527024149,0.956441660344217,1.76473135295612,1.15933917810211
|phase1_expression=3.84357233051505,0.348975407639361,0,0,0,0.503637815735669,0,2.06597317506522,0,0.234064526321993,0,0,0,0,0,0,0,0,0.137114433605739,0,2.38121212422995,0,0,0.319984845586813,1.60586496747019,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,3.2703773457067,1.09843091367236,3.30530828426282,2.51975558925653,4.31257693094915,0,2.17608642603403,0,0.771778308107841,0.573066879877513,1.03134418455488,1.82084814773638,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,4.19440154725767,8.4528027170742,0.725827286159344,1.75507719831198,1.26194976810829,2.57085885963423,3.09215957332259,1.34739879136449,0.958454710182364,0.919218786610021,1.10115880999389,3.31987079021488,3.37934373163736,1.45074916503213,1.73826522844578,1.56274011167028,3.07101298901519,3.93933827022176,3.20876320331301,5.00868595305235,4.27115042397309,2.05039390407831,2.49896437999507,8.23730005163962,2.89864488701678,0,0,0,0,0,0.842666520790511,0,0,0,15.7744630149882,0,0,0,0,0,0,2.05530983494308,1.03575153458869,1.1875371125186,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,1.29347577849275,0,0.988779870937496,1.15679485535929,0,1.13236794963186,0.220841518460394,0.969750506270444,0,3.22058876712702,5.65506108396329,0,0,0,0,4.04434726393021,6.40500843946077,1.63350657746724,7.30062144807561,7.16003280524926,6.2336413367868,3.56930778749067,2.64782346010822,0.622034853050465,0.758168275301024,1.89397670297827,3.12289063110489,1.14951052216736,2.52086981727489,1.35634336052144,2.99360596265843,3.58718416797579,2.34254311399322,1.81092359517311,0.215567992932842,1.32374256117473,0.703804496655795,0.876782929710299,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,0.946978942340841,1.37734962223183,0.462801338662135,1.16266972375204,0.536546802799238,0.583826711835847,0.987359099480883,0.656669856316381,0.972825714550269,1.02339991197733,0.439100230582101,1.20785776884335,9.04246778825747,3.49875682089567,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.201683524623343,0,1.14135375667535,0,0.494096864172033,0.754005626400808,0,0.19496408711912,0,0,0.995706366271836,0.948339504765408,0.571242563048644,0,0.610953983535943,0.969762435838129,1.82353131714828,1.83385957660346,3.98547399544926,4.55296310739987,5.05928372079382,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,1.13694847062291,0.977789858652155,0.169745085775188,1.17345124144251,0.670025029767263,0.714130922658041,0.195133647857799,0.945810864637146,1.32878813789265,1.11618338060241,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0.275936746304732,7.38532713943843,4.80567915028033,0.491804836130026,0.252470927204373,0,0.390438744296638,0.215423397732799,0,1.33679204449436,0.283076530788832,1.21443210502468,0.584511715822624,0,14.4594592389813,0.99358059645788,1.24645922567079,2.60619134965722,2.14461159864296,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,0,3.06395645178409,1.08036656418786,0.776152102696527,0.643011105094777,0.532020700926821,1.24858172321449,1.64549020602121,0.304464949114599,0,3.81297727554876,0.661585194164886,1.6488625294148,0.807322133479528,0.663442174209714,0.596861720015682,0.820704498725306,0.582961673259701,5.56275906031529,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.609958401380546,0.648032044930808,0.209088296014469,0.87345025498471,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,0.621339313086926,0,2.24274819065968,2.81279433777066,4.4723773319131,4.00395452780966,3.37912250981556,7.15879155739099,3.1249052362548,2.09718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,1.15913756419314,3.00291960721891,2.56412273974171,1.71494703263253,0,7.90652579663893,5.9842280745933,7.44764167471216,5.15559547031063,7.53590771747707,4.5323633843382,6.75022500231806,6.75481804836331,3.62513927187364,5.69536342927002,0.415149390336707,0.798049746802062,1.87806966329548,0.486213434136588,1.25767897576789,1.2869045591501,0.44449345560323,0.618105171716683,2.24643446714271,1.51618327058278,0.50695859978048,0.754505365544305,1.03005658216871,1.15245274328765,1.55075766180156,0.476293691283074,0.927074607558844,0.77163688185482,0,1.03039244094078,1.02860775715625,0.70990322463735,1.66905332963125,1.45346416632329,1.12931256498397,1.26921911837515,0.73171189149109,1.31534855718921,1.49384525230448,0.561142271657738,0.949080144993393,0.985044823755635,0.818462086339379,1.54936841185966,1.73615949883027,1.24905288968973,0.935726433781634,1.07435527024149,0.956441660344217,1.76473135295612,1.15933917810211
|short_description=p4@Itgb8
|short_description=p4@Itgb8
}}
}}

Latest revision as of 11:04, 26 September 2015

Short description:p4@Itgb8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Itgb8_5end
Coexpression cluster:NA
Association with transcript: 78bp_to_ENSMUST00000137804_5end
EntrezGene:Itgb8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Itgb8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F98.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B77.16
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.55e-0844
neurectodermal cell1.55e-0844
neural cell6.85e-0843

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.01e-2495
ectoderm3.01e-2495
presumptive ectoderm3.01e-2495
nervous system5.65e-2375
neurectoderm4.83e-2264
neural plate4.83e-2264
presumptive neural plate4.83e-2264
central nervous system1.37e-2173
regional part of nervous system1.50e-2054
ecto-epithelium3.20e-2073
neural tube5.87e-2052
neural rod5.87e-2052
future spinal cord5.87e-2052
neural keel5.87e-2052
pre-chordal neural plate1.98e-1749
brain4.51e-1747
future brain4.51e-1747
gray matter2.77e-1634
structure with developmental contribution from neural crest3.12e-1692
regional part of brain3.15e-1646
anterior neural tube1.54e-1340
brain grey matter2.25e-1329
regional part of telencephalon2.25e-1329
telencephalon2.25e-1329
regional part of forebrain6.76e-1339
forebrain6.76e-1339
future forebrain6.76e-1339
cerebral cortex1.04e-0921
cerebral hemisphere1.04e-0921
pallium1.04e-0921
occipital lobe2.26e-0910
visual cortex2.26e-0910
neocortex2.26e-0910
regional part of cerebral cortex2.72e-0917
posterior neural tube2.27e-0712
chordal neural plate2.27e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:120477144..120477164,-&oldid=4250100"