FFCP PHASE1:Mm9::chr6:113433323..113433360,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:113433323..113433360,+ to FFCP PHASE1:Mm9::chr6:113433323..113433360,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XD7 | |UniProt=Q91XD7 | ||
|association_with_transcript=32bp_to_ENSMUST00000032422_5end | |||
|cluster_id=chr6:113433323..113433360,+ | |||
|description=CAGE_peak_5_at_Creld1_5end | |||
|id=chr6:113433323..113433360,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.25e-17!44;CL:0000133!7.25e-17!44;CL:0002319!1.51e-16!43;CL:0000540!9.65e-15!33;CL:0000047!9.65e-15!33;CL:0000031!9.65e-15!33;CL:0000404!9.65e-15!33;CL:0000117!1.35e-12!23;CL:0000337!1.35e-12!23;CL:0000055!3.33e-11!50;CL:0000393!4.72e-09!39;CL:0000211!4.72e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.73e-19,44;CL:0000133,9.73e-19,44;CL:0002319,2.26e-18,43;CL:0000540,1.10e-16,33;CL:0000047,1.10e-16,33;CL:0000031,1.10e-16,33;CL:0000404,1.10e-16,33;CL:0000117,3.21e-14,23;CL:0000337,3.21e-14,23;CL:0000393,1.06e-11,39;CL:0000211,1.06e-11,39;CL:0002321,1.36e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.48e-34!75;UBERON:0001016!2.48e-34!75;UBERON:0001017!1.45e-33!73;UBERON:0005743!1.45e-33!73;UBERON:0004121!2.78e-30!102;UBERON:0000924!2.78e-30!102;UBERON:0006601!2.78e-30!102;UBERON:0000033!1.04e-25!63;UBERON:0002346!4.80e-25!71;UBERON:0003075!4.80e-25!71;UBERON:0007284!4.80e-25!71;UBERON:0001049!1.91e-24!52;UBERON:0005068!1.91e-24!52;UBERON:0006241!1.91e-24!52;UBERON:0007135!1.91e-24!52;UBERON:0000955!3.66e-23!50;UBERON:0006238!3.66e-23!50;UBERON:0002616!1.27e-22!49;UBERON:0003056!2.79e-21!49;UBERON:0007811!1.46e-20!86;UBERON:0003080!4.60e-19!40;UBERON:0000153!1.13e-18!94;UBERON:0002780!1.91e-18!39;UBERON:0001890!1.91e-18!39;UBERON:0006240!1.91e-18!39;UBERON:0002020!5.48e-18!34;UBERON:0002791!4.89e-15!29;UBERON:0003528!4.89e-15!29;UBERON:0001893!4.89e-15!29;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!8.45e-10!17;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.74e-39,75;UBERON:0001017,7.44e-38,73;UBERON:0004121,1.45e-34,95;UBERON:0000924,1.45e-34,95;UBERON:0006601,1.45e-34,95;UBERON:0002346,4.52e-31,64;UBERON:0003075,4.52e-31,64;UBERON:0007284,4.52e-31,64;UBERON:0000073,5.93e-29,54;UBERON:0001049,2.16e-27,52;UBERON:0005068,2.16e-27,52;UBERON:0006241,2.16e-27,52;UBERON:0007135,2.16e-27,52;UBERON:0010371,7.95e-26,73;UBERON:0003056,3.41e-24,49;UBERON:0000955,1.37e-23,47;UBERON:0006238,1.37e-23,47;UBERON:0002616,5.51e-23,46;UBERON:0003080,1.20e-21,40;UBERON:0010314,3.67e-21,92;UBERON:0002780,6.15e-21,39;UBERON:0001890,6.15e-21,39;UBERON:0006240,6.15e-21,39;UBERON:0002020,2.07e-20,34;UBERON:0003528,5.04e-17,29;UBERON:0002791,5.04e-17,29;UBERON:0001893,5.04e-17,29;UBERON:0000956,7.87e-13,21;UBERON:0001869,7.87e-13,21;UBERON:0000203,7.87e-13,21;UBERON:0002619,5.16e-11,17;UBERON:0002021,1.74e-08,10;UBERON:0000411,1.74e-08,10;UBERON:0001950,1.74e-08,10 | |||
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| ||
|short_description=p5@Creld1 | |||
}} | }} |
Latest revision as of 11:31, 26 September 2015
Short description: | p5@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 32bp_to_ENSMUST00000032422_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.73e-19 | 44 |
neurectodermal cell | 9.73e-19 | 44 |
neural cell | 2.26e-18 | 43 |
neuron | 1.10e-16 | 33 |
neuronal stem cell | 1.10e-16 | 33 |
neuroblast | 1.10e-16 | 33 |
electrically signaling cell | 1.10e-16 | 33 |
CNS neuron (sensu Vertebrata) | 3.21e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-14 | 23 |
electrically responsive cell | 1.06e-11 | 39 |
electrically active cell | 1.06e-11 | 39 |
embryonic cell | 1.36e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.74e-39 | 75 |
central nervous system | 7.44e-38 | 73 |
ectoderm-derived structure | 1.45e-34 | 95 |
ectoderm | 1.45e-34 | 95 |
presumptive ectoderm | 1.45e-34 | 95 |
neurectoderm | 4.52e-31 | 64 |
neural plate | 4.52e-31 | 64 |
presumptive neural plate | 4.52e-31 | 64 |
regional part of nervous system | 5.93e-29 | 54 |
neural tube | 2.16e-27 | 52 |
neural rod | 2.16e-27 | 52 |
future spinal cord | 2.16e-27 | 52 |
neural keel | 2.16e-27 | 52 |
ecto-epithelium | 7.95e-26 | 73 |
pre-chordal neural plate | 3.41e-24 | 49 |
brain | 1.37e-23 | 47 |
future brain | 1.37e-23 | 47 |
regional part of brain | 5.51e-23 | 46 |
anterior neural tube | 1.20e-21 | 40 |
structure with developmental contribution from neural crest | 3.67e-21 | 92 |
regional part of forebrain | 6.15e-21 | 39 |
forebrain | 6.15e-21 | 39 |
future forebrain | 6.15e-21 | 39 |
gray matter | 2.07e-20 | 34 |
brain grey matter | 5.04e-17 | 29 |
regional part of telencephalon | 5.04e-17 | 29 |
telencephalon | 5.04e-17 | 29 |
cerebral cortex | 7.87e-13 | 21 |
cerebral hemisphere | 7.87e-13 | 21 |
pallium | 7.87e-13 | 21 |
regional part of cerebral cortex | 5.16e-11 | 17 |
occipital lobe | 1.74e-08 | 10 |
visual cortex | 1.74e-08 | 10 |
neocortex | 1.74e-08 | 10 |