FFCP PHASE1:Mm9::chr6:113433323..113433360,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XD7 | |UniProt=Q91XD7 | ||
|association_with_transcript=32bp_to_ENSMUST00000032422_5end | |association_with_transcript=32bp_to_ENSMUST00000032422_5end | ||
|cluster_id=chr6:113433323..113433360,+ | |||
|description=CAGE_peak_5_at_Creld1_5end | |description=CAGE_peak_5_at_Creld1_5end | ||
|id=chr6:113433323..113433360,+ | |id=chr6:113433323..113433360,+ | ||
|ontology_enrichment_celltype=CL:0000221!7.25e-17!44;CL:0000133!7.25e-17!44;CL:0002319!1.51e-16!43;CL:0000540!9.65e-15!33;CL:0000047!9.65e-15!33;CL:0000031!9.65e-15!33;CL:0000404!9.65e-15!33;CL:0000117!1.35e-12!23;CL:0000337!1.35e-12!23;CL:0000055!3.33e-11!50;CL:0000393!4.72e-09!39;CL:0000211!4.72e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.73e-19,44;CL:0000133,9.73e-19,44;CL:0002319,2.26e-18,43;CL:0000540,1.10e-16,33;CL:0000047,1.10e-16,33;CL:0000031,1.10e-16,33;CL:0000404,1.10e-16,33;CL:0000117,3.21e-14,23;CL:0000337,3.21e-14,23;CL:0000393,1.06e-11,39;CL:0000211,1.06e-11,39;CL:0002321,1.36e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.48e-34!75;UBERON:0001016!2.48e-34!75;UBERON:0001017!1.45e-33!73;UBERON:0005743!1.45e-33!73;UBERON:0004121!2.78e-30!102;UBERON:0000924!2.78e-30!102;UBERON:0006601!2.78e-30!102;UBERON:0000033!1.04e-25!63;UBERON:0002346!4.80e-25!71;UBERON:0003075!4.80e-25!71;UBERON:0007284!4.80e-25!71;UBERON:0001049!1.91e-24!52;UBERON:0005068!1.91e-24!52;UBERON:0006241!1.91e-24!52;UBERON:0007135!1.91e-24!52;UBERON:0000955!3.66e-23!50;UBERON:0006238!3.66e-23!50;UBERON:0002616!1.27e-22!49;UBERON:0003056!2.79e-21!49;UBERON:0007811!1.46e-20!86;UBERON:0003080!4.60e-19!40;UBERON:0000153!1.13e-18!94;UBERON:0002780!1.91e-18!39;UBERON:0001890!1.91e-18!39;UBERON:0006240!1.91e-18!39;UBERON:0002020!5.48e-18!34;UBERON:0002791!4.89e-15!29;UBERON:0003528!4.89e-15!29;UBERON:0001893!4.89e-15!29;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!8.45e-10!17;UBERON:0002021!1.36e-07!10;UBERON:0000411!1.36e-07!10;UBERON:0001950!1.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.74e-39,75;UBERON:0001017,7.44e-38,73;UBERON:0004121,1.45e-34,95;UBERON:0000924,1.45e-34,95;UBERON:0006601,1.45e-34,95;UBERON:0002346,4.52e-31,64;UBERON:0003075,4.52e-31,64;UBERON:0007284,4.52e-31,64;UBERON:0000073,5.93e-29,54;UBERON:0001049,2.16e-27,52;UBERON:0005068,2.16e-27,52;UBERON:0006241,2.16e-27,52;UBERON:0007135,2.16e-27,52;UBERON:0010371,7.95e-26,73;UBERON:0003056,3.41e-24,49;UBERON:0000955,1.37e-23,47;UBERON:0006238,1.37e-23,47;UBERON:0002616,5.51e-23,46;UBERON:0003080,1.20e-21,40;UBERON:0010314,3.67e-21,92;UBERON:0002780,6.15e-21,39;UBERON:0001890,6.15e-21,39;UBERON:0006240,6.15e-21,39;UBERON:0002020,2.07e-20,34;UBERON:0003528,5.04e-17,29;UBERON:0002791,5.04e-17,29;UBERON:0001893,5.04e-17,29;UBERON:0000956,7.87e-13,21;UBERON:0001869,7.87e-13,21;UBERON:0000203,7.87e-13,21;UBERON:0002619,5.16e-11,17;UBERON:0002021,1.74e-08,10;UBERON:0000411,1.74e-08,10;UBERON:0001950,1.74e-08,10 | |||
|phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,1.51232105653415,1.50268718983904,0.503637815735669,0.467225281191051,0.645616617207881,1.267098499365,1.17032263160997,0.68487187290202,0.398860794976682,0.856003649656029,1.04904482902797,0.333109761815663,0,0,0.788655413395594,1.50825876966313,2.12194825899015,0.850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,1.30815093828268,2.41654801007919,2.91644848611425,1.1198913730029,4.31257693094915,2.34895648480831,2.90144856804538,0.672187598284928,0,0,0,4.85559506063035,8.46385566835253,6.97214543856797,0.338844532069132,0,0.899899717281399,1.97773272513395,2.1314403448383,2.99600110518405,6.14749288514487,3.94020526772215,3.24014251996058,2.52389953621658,14.2825492201902,5.96345060569357,2.69479758272899,2.01275489138296,6.43453150627015,18.7196997698961,8.04430229936683,6.14426133024974,5.67111037239834,2.56165402086747,6.25096044668112,5.862842979029,11.2552522006336,8.25110537994775,9.1334861496837,6.12198227436143,3.54158947068071,2.57469057332826,2.72057616384428,0.869593466105033,1.72084775396277,0,1.61910957491345,2.59910566979068,0,2.38755514223978,0,0,0.35333957451034,2.67602497575693,0,0,0,0.649473123033642,1.52015919285059,0,0.91347103775248,1.8125651855302,0.742210695324124,0.520455980298408,1.52232739156071,0.691846491768175,1.80867168663147,0.823120949949934,0.502666365318702,0.988779870937496,0.578397427679647,0,1.29413479957927,0.883366073841574,1.45462575940567,0,2.92780797011547,5.44561437714983,0,0.11981512450592,0,0.762421362438388,6.89036941262184,3.66000482254901,2.01046963380583,7.64827008846016,4.85859368927628,7.89594569326328,6.32740925964255,0.407357455401265,0.497627882440372,0.505445516867349,1.68353484709179,1.69156575851515,3.21862946206862,2.70093194708024,3.0140963567143,2.04109497453984,1.7935920839879,3.46696380870997,3.3631438196072,0.431135985865684,1.13463648100692,1.58356011747554,1.09597866213787,0.834141747676794,0,0.411564272815887,1.19420560091096,0,0,1.13665399758237,2.07125772535502,0.234526059981096,1.08037236876609,1.65721314909647,0.983821158737019,1.07986979021165,2.32533944750408,0.268273401399619,0.934122738937356,0.493679549740441,1.80584210487005,0.729619285912702,1.02339991197733,1.09775057645525,0.402619256281115,7.57043814830858,3.39585220851639,0,0,0.639864751605702,1.62565670302307,1.15980715189884,1.81515172161008,1.11189021922435,1.14135375667535,0,0.823494773620054,0.754005626400808,0.994782360205754,0.38992817423824,0,0,0,1.32767530667157,0.913988100877831,2.25415471346161,1.4255592949172,1.16371492300575,0.561086559122548,0.442655759869801,0.295220295959204,0.627994911365499,0.123397163921801,0.592905254174298,0.500535317148282,0,0.674586337154561,0.202860121388503,0.72353147925725,0.50925170356284,0,0.324270453550071,0,0,0,0,0.252578877947112,1.07638448113147,0.482443521363367,0.739012760666419,0.757965647081939,0.814824882210129,1.18821560042632,0.234690248288502,1.17254380209271,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.478364305972461,0.81931657357869,1.03610989119537,0.289298117163023,0,1.08781136763742,0.491764273019036,0.827810238914197,7.38532713943843,7.14991288212439,0,5.55436039849621,1.89304931649754,2.73307121007647,2.15423397732799,1.91175038362042,1.78238939265915,3.96307143104365,2.02405350837447,2.63030272120181,3.16230222357219,4.81981974632711,1.27746076687442,0.890328018336276,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0.943025398779491,1.47650946440386,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,4.76615448055303,1.8006109403131,1.29358683782755,1.50035924522115,4.25616560741457,5.17269571046005,3.78462747384878,3.95804433848979,0.704015124191131,0.847328283455281,1.10264199027481,0.49465875882444,0,0.72375509913787,0.119372344003136,0.984845398470368,0.582961673259701,8.52956389248344,0.854354403989263,0.206386867963223,0.185194527369712,0,0.27338845544205,0.457556346413045,0.169978429993855,0.839708713941948,0.276399947608848,0,1.10717597753397,0.609958401380546,0.216010681643603,0.836353184057875,0.436725127492355,0.269728692769641,0.41326727862668,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,0.448549638131936,0.66183396182839,0.194451188344048,0.645799117388655,1.01373675294467,0.234714477291508,0.651021924219751,1.25831213310853,2.17425708743405,1.44015003128933,1.26404448251271,0.810900861160657,0.924398614483445,0.909445760844565,0.537080087002444,1.58945083825012,0.841368146639782,1.18151621739662,1.9183625490148,1.143102099825,2.21817607301049,2.92373642219257,1.73181314952593,3.15567635890236,1.36038230169127,0.221985953374065,0,0.167884616364078,0.965947970160952,1.31377732815827,0.183151624267265,0,0,8.471277639256,10.1271552031579,13.1765968091061,11.6860163993708,8.22099023724771,8.3093328712867,8.77529250301348,6.75481804836331,4.07828168085784,6.73088405277366,0.726511433089237,2.39414924040619,3.41467211508268,2.18796045361465,1.25767897576789,1.10306105070008,4.00044110042907,0.618105171716683,3.85103051510178,3.53776096469316,2.28131369901216,3.2066478035633,1.31098110457835,1.60062881012173,1.83793500657962,2.85776214769844,1.73826488917283,0.77163688185482,0.412085900803307,1.17759136107518,1.71434626192708,1.4198064492747,0.953744759789284,2.18019624948493,2.07040636913727,1.60767754994185,2.19513567447327,1.31534855718921,2.58027816307137,3.92799590160417,2.13543032623513,2.65962102414021,2.45538625901814,2.32405261778949,1.92906610981141,4.99621155875892,2.10538447600868,1.07435527024149,0.765153328275374,2.64709702943419,2.55054619182464 | |phase1_expression=3.36312578920067,0.697950815278722,0.454999239389536,1.51232105653415,1.50268718983904,0.503637815735669,0.467225281191051,0.645616617207881,1.267098499365,1.17032263160997,0.68487187290202,0.398860794976682,0.856003649656029,1.04904482902797,0.333109761815663,0,0,0.788655413395594,1.50825876966313,2.12194825899015,0.850432901510698,0.198581902401771,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,1.30815093828268,2.41654801007919,2.91644848611425,1.1198913730029,4.31257693094915,2.34895648480831,2.90144856804538,0.672187598284928,0,0,0,4.85559506063035,8.46385566835253,6.97214543856797,0.338844532069132,0,0.899899717281399,1.97773272513395,2.1314403448383,2.99600110518405,6.14749288514487,3.94020526772215,3.24014251996058,2.52389953621658,14.2825492201902,5.96345060569357,2.69479758272899,2.01275489138296,6.43453150627015,18.7196997698961,8.04430229936683,6.14426133024974,5.67111037239834,2.56165402086747,6.25096044668112,5.862842979029,11.2552522006336,8.25110537994775,9.1334861496837,6.12198227436143,3.54158947068071,2.57469057332826,2.72057616384428,0.869593466105033,1.72084775396277,0,1.61910957491345,2.59910566979068,0,2.38755514223978,0,0,0.35333957451034,2.67602497575693,0,0,0,0.649473123033642,1.52015919285059,0,0.91347103775248,1.8125651855302,0.742210695324124,0.520455980298408,1.52232739156071,0.691846491768175,1.80867168663147,0.823120949949934,0.502666365318702,0.988779870937496,0.578397427679647,0,1.29413479957927,0.883366073841574,1.45462575940567,0,2.92780797011547,5.44561437714983,0,0.11981512450592,0,0.762421362438388,6.89036941262184,3.66000482254901,2.01046963380583,7.64827008846016,4.85859368927628,7.89594569326328,6.32740925964255,0.407357455401265,0.497627882440372,0.505445516867349,1.68353484709179,1.69156575851515,3.21862946206862,2.70093194708024,3.0140963567143,2.04109497453984,1.7935920839879,3.46696380870997,3.3631438196072,0.431135985865684,1.13463648100692,1.58356011747554,1.09597866213787,0.834141747676794,0,0.411564272815887,1.19420560091096,0,0,1.13665399758237,2.07125772535502,0.234526059981096,1.08037236876609,1.65721314909647,0.983821158737019,1.07986979021165,2.32533944750408,0.268273401399619,0.934122738937356,0.493679549740441,1.80584210487005,0.729619285912702,1.02339991197733,1.09775057645525,0.402619256281115,7.57043814830858,3.39585220851639,0,0,0.639864751605702,1.62565670302307,1.15980715189884,1.81515172161008,1.11189021922435,1.14135375667535,0,0.823494773620054,0.754005626400808,0.994782360205754,0.38992817423824,0,0,0,1.32767530667157,0.913988100877831,2.25415471346161,1.4255592949172,1.16371492300575,0.561086559122548,0.442655759869801,0.295220295959204,0.627994911365499,0.123397163921801,0.592905254174298,0.500535317148282,0,0.674586337154561,0.202860121388503,0.72353147925725,0.50925170356284,0,0.324270453550071,0,0,0,0,0.252578877947112,1.07638448113147,0.482443521363367,0.739012760666419,0.757965647081939,0.814824882210129,1.18821560042632,0.234690248288502,1.17254380209271,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.478364305972461,0.81931657357869,1.03610989119537,0.289298117163023,0,1.08781136763742,0.491764273019036,0.827810238914197,7.38532713943843,7.14991288212439,0,5.55436039849621,1.89304931649754,2.73307121007647,2.15423397732799,1.91175038362042,1.78238939265915,3.96307143104365,2.02405350837447,2.63030272120181,3.16230222357219,4.81981974632711,1.27746076687442,0.890328018336276,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0.943025398779491,1.47650946440386,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,4.76615448055303,1.8006109403131,1.29358683782755,1.50035924522115,4.25616560741457,5.17269571046005,3.78462747384878,3.95804433848979,0.704015124191131,0.847328283455281,1.10264199027481,0.49465875882444,0,0.72375509913787,0.119372344003136,0.984845398470368,0.582961673259701,8.52956389248344,0.854354403989263,0.206386867963223,0.185194527369712,0,0.27338845544205,0.457556346413045,0.169978429993855,0.839708713941948,0.276399947608848,0,1.10717597753397,0.609958401380546,0.216010681643603,0.836353184057875,0.436725127492355,0.269728692769641,0.41326727862668,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,0.448549638131936,0.66183396182839,0.194451188344048,0.645799117388655,1.01373675294467,0.234714477291508,0.651021924219751,1.25831213310853,2.17425708743405,1.44015003128933,1.26404448251271,0.810900861160657,0.924398614483445,0.909445760844565,0.537080087002444,1.58945083825012,0.841368146639782,1.18151621739662,1.9183625490148,1.143102099825,2.21817607301049,2.92373642219257,1.73181314952593,3.15567635890236,1.36038230169127,0.221985953374065,0,0.167884616364078,0.965947970160952,1.31377732815827,0.183151624267265,0,0,8.471277639256,10.1271552031579,13.1765968091061,11.6860163993708,8.22099023724771,8.3093328712867,8.77529250301348,6.75481804836331,4.07828168085784,6.73088405277366,0.726511433089237,2.39414924040619,3.41467211508268,2.18796045361465,1.25767897576789,1.10306105070008,4.00044110042907,0.618105171716683,3.85103051510178,3.53776096469316,2.28131369901216,3.2066478035633,1.31098110457835,1.60062881012173,1.83793500657962,2.85776214769844,1.73826488917283,0.77163688185482,0.412085900803307,1.17759136107518,1.71434626192708,1.4198064492747,0.953744759789284,2.18019624948493,2.07040636913727,1.60767754994185,2.19513567447327,1.31534855718921,2.58027816307137,3.92799590160417,2.13543032623513,2.65962102414021,2.45538625901814,2.32405261778949,1.92906610981141,4.99621155875892,2.10538447600868,1.07435527024149,0.765153328275374,2.64709702943419,2.55054619182464 | ||
|short_description=p5@Creld1 | |short_description=p5@Creld1 | ||
}} | }} |
Latest revision as of 11:31, 26 September 2015
Short description: | p5@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 32bp_to_ENSMUST00000032422_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.73e-19 | 44 |
neurectodermal cell | 9.73e-19 | 44 |
neural cell | 2.26e-18 | 43 |
neuron | 1.10e-16 | 33 |
neuronal stem cell | 1.10e-16 | 33 |
neuroblast | 1.10e-16 | 33 |
electrically signaling cell | 1.10e-16 | 33 |
CNS neuron (sensu Vertebrata) | 3.21e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-14 | 23 |
electrically responsive cell | 1.06e-11 | 39 |
electrically active cell | 1.06e-11 | 39 |
embryonic cell | 1.36e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.74e-39 | 75 |
central nervous system | 7.44e-38 | 73 |
ectoderm-derived structure | 1.45e-34 | 95 |
ectoderm | 1.45e-34 | 95 |
presumptive ectoderm | 1.45e-34 | 95 |
neurectoderm | 4.52e-31 | 64 |
neural plate | 4.52e-31 | 64 |
presumptive neural plate | 4.52e-31 | 64 |
regional part of nervous system | 5.93e-29 | 54 |
neural tube | 2.16e-27 | 52 |
neural rod | 2.16e-27 | 52 |
future spinal cord | 2.16e-27 | 52 |
neural keel | 2.16e-27 | 52 |
ecto-epithelium | 7.95e-26 | 73 |
pre-chordal neural plate | 3.41e-24 | 49 |
brain | 1.37e-23 | 47 |
future brain | 1.37e-23 | 47 |
regional part of brain | 5.51e-23 | 46 |
anterior neural tube | 1.20e-21 | 40 |
structure with developmental contribution from neural crest | 3.67e-21 | 92 |
regional part of forebrain | 6.15e-21 | 39 |
forebrain | 6.15e-21 | 39 |
future forebrain | 6.15e-21 | 39 |
gray matter | 2.07e-20 | 34 |
brain grey matter | 5.04e-17 | 29 |
regional part of telencephalon | 5.04e-17 | 29 |
telencephalon | 5.04e-17 | 29 |
cerebral cortex | 7.87e-13 | 21 |
cerebral hemisphere | 7.87e-13 | 21 |
pallium | 7.87e-13 | 21 |
regional part of cerebral cortex | 5.16e-11 | 17 |
occipital lobe | 1.74e-08 | 10 |
visual cortex | 1.74e-08 | 10 |
neocortex | 1.74e-08 | 10 |