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FFCP PHASE1:Mm9::chr12:21423452..21423466,-: Difference between revisions

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(Created page with "{{FFCP |id=chr12:21423452..21423466,- |short_description=p2@LOC100503129,p2@Ywhaq |description=CAGE_peak_2_at_LOC100503129_5end,CAGE_peak_2_at_Ywhaq_5end |association_with...")
 
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{{FFCP
{{FFCP
|id=chr12:21423452..21423466,-
|DHSsupport=NA
|short_description=p2@LOC100503129,p2@Ywhaq
|DPIdataset=NA
|description=CAGE_peak_2_at_LOC100503129_5end,CAGE_peak_2_at_Ywhaq_5end
|association_with_transcript=-3bp_to_ENSMUST00000155480_5end
|EntrezGene=100503129,22630
|EntrezGene=100503129,22630
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=F6YY69
|UniProt=F6YY69
|association_with_transcript=-3bp_to_ENSMUST00000155480_5end
|cluster_id=chr12:21423452..21423466,-
|description=CAGE_peak_2_at_LOC100503129_5end,CAGE_peak_2_at_Ywhaq_5end
|id=chr12:21423452..21423466,-
|ontology_enrichment_celltype=CL:0000117!3.59e-13!23;CL:0000337!3.59e-13!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000393!4.34e-07!39;CL:0000211!4.34e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-13,23;CL:0000337,3.59e-13,23;CL:0000540,5.22e-09,33;CL:0000047,5.22e-09,33;CL:0000031,5.22e-09,33;CL:0000404,5.22e-09,33;CL:0000393,4.34e-07,39;CL:0000211,4.34e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.99e-22!63;UBERON:0001049!1.02e-21!52;UBERON:0005068!1.02e-21!52;UBERON:0006241!1.02e-21!52;UBERON:0007135!1.02e-21!52;UBERON:0002346!1.09e-21!71;UBERON:0003075!1.09e-21!71;UBERON:0007284!1.09e-21!71;UBERON:0000955!1.66e-20!50;UBERON:0006238!1.66e-20!50;UBERON:0002616!3.77e-20!49;UBERON:0000073!1.08e-19!75;UBERON:0001016!1.08e-19!75;UBERON:0004121!2.66e-19!102;UBERON:0000924!2.66e-19!102;UBERON:0006601!2.66e-19!102;UBERON:0003056!4.25e-19!49;UBERON:0001017!7.51e-19!73;UBERON:0005743!7.51e-19!73;UBERON:0003080!3.42e-18!40;UBERON:0002780!1.34e-17!39;UBERON:0001890!1.34e-17!39;UBERON:0006240!1.34e-17!39;UBERON:0002020!4.25e-17!34;UBERON:0002791!4.61e-14!29;UBERON:0003528!4.61e-14!29;UBERON:0001893!4.61e-14!29;UBERON:0007811!1.33e-11!86;UBERON:0000153!1.88e-11!94;UBERON:0000956!8.56e-10!21;UBERON:0001869!8.56e-10!21;UBERON:0000203!8.56e-10!21;UBERON:0002619!4.34e-08!17;UBERON:0002021!4.54e-07!10;UBERON:0000411!4.54e-07!10;UBERON:0001950!4.54e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-23,54;UBERON:0002346,8.34e-22,64;UBERON:0003075,8.34e-22,64;UBERON:0007284,8.34e-22,64;UBERON:0001049,1.01e-21,52;UBERON:0005068,1.01e-21,52;UBERON:0006241,1.01e-21,52;UBERON:0007135,1.01e-21,52;UBERON:0010371,4.32e-20,73;UBERON:0001016,1.07e-19,75;UBERON:0003056,4.25e-19,49;UBERON:0004121,6.95e-19,95;UBERON:0000924,6.95e-19,95;UBERON:0006601,6.95e-19,95;UBERON:0001017,7.43e-19,73;UBERON:0000955,1.59e-18,47;UBERON:0006238,1.59e-18,47;UBERON:0003080,3.42e-18,40;UBERON:0002616,3.57e-18,46;UBERON:0002780,1.34e-17,39;UBERON:0001890,1.34e-17,39;UBERON:0006240,1.34e-17,39;UBERON:0010314,2.20e-17,92;UBERON:0002020,4.25e-17,34;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0000956,8.56e-10,21;UBERON:0001869,8.56e-10,21;UBERON:0000203,8.56e-10,21;UBERON:0002619,4.34e-08,17;UBERON:0002021,4.54e-07,10;UBERON:0000411,4.54e-07,10;UBERON:0001950,4.54e-07,10
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67780286,3.97267762427491,6.76923947613151,6.20375993370175,4.3806331534428,4.97336289769656,4.40690909192096,8.07741107013003,20.856638731315,4.18646328923141,6.45288112782681,4.86127970860119,6.58715099736429,5.23763989021412,5.8678619322877,5.07797100891405,5.55754525456268,8.21386010808421,8.64090018773596,4.10814456816632,6.28448167399509,5.03283690107653,4.15746633528944,3.22248052201467,4.76835251475036,5.52899067791857,3.39685912501528,4.03865799792591,3.42930629947499,3.62974266492626,2.63136277997332,3.07877893249054,2.10378423926824,3.17422537061296,6.21560669447381,3.94740969081693,6.04384618910682,4.63655025677257,3.94133198447482,3.84618410961257,7.93163002592544,7.52358156053045,11.2950368523413,11.0478056761722,17.7597609166213,9.79563139359019,13.7016503954128,12.0863023582352,16.2005400055633,14.4102785031751,13.5942722695261,12.9440077937955,6.43481555021895,4.38927360741134,7.17081144167364,3.8897074730927,7.33646069197938,7.53758384645058,5.11167473943715,4.94484137373346,3.20919209591815,3.79045817645696,5.57654459758527,5.09291121742406,3.46473577638565,4.92993673517493,4.42253110958222,5.23923060411381,4.05595140806994,4.82273051159263,7.41754621445952,5.88795680537589,4.80016953339582,3.72699192934609,4.5302876089991,3.48831399917588,4.6113596403512,4.56918882615053,3.29270351170991,4.20911538300549,5.16055632614275,3.92799590160417,4.38949567059444,4.0386837773981,3.6830793885272,4.80304207676495,3.47231899766054,5.49583271463481,4.44470056046276,4.29742108096597,4.01705497344571,5.7353768971074,4.63735671240843
|phase1_expression=8.16759120234449,2.44282785347553,0.909998478779072,2.72217790176147,2.50447864973174,3.18970616632591,2.80335168714631,3.87369970324729,1.68946466582,1.63845168425395,3.76679530096111,2.6324812468461,2.56801094896809,2.27293046289393,3.99731714178795,3.44207954562704,4.19737126876888,2.99689057090326,2.4680598049033,2.12194825899015,3.99703463710028,2.97872853602656,6.00759515019551,2.55987876469451,3.21172993494038,2.8711598205751,2.15380998079537,2.37018355954478,3.6104449696711,1.76421090831952,3.32595765982957,1.90509202037889,2.46025915033828,15.8481681015439,5.19932915552294,5.98444723290572,4.08338712524738,4.60384793810598,10.1573594788094,8.89990364755457,4.70585190424811,6.14740936462601,6.79714494243615,1.25896817975577,1.92616169317078,2.20256102594018,0.782391344348039,3.05235218932625,4.83309602015838,3.4997381833371,4.75953833526233,2.87505128729943,2.85230430298152,4.35217285206807,1.34437519656986,6.17422646486273,6.30373567865265,6.70373719960675,9.1042407386819,7.93486468908049,12.0427966666174,3.72728985276045,2.66788438833342,1.7997994345628,0.988866362566974,2.8419204597844,0.898800331555214,3.07374644257244,9.02099627083756,9.45041568321835,10.9368979902719,13.4255962669788,17.0068776532742,11.3916443269907,10.8305382250607,11.0306254393203,20.9220173898839,11.8749224419225,16.4358990584181,6.72620067423989,9.42322729104819,13.5437476344758,18.1468949350898,24.7615548413939,14.6686317865738,15.6153150301044,14.0947963991112,9.31997229126503,7.57261933331841,9.44644501334819,4.05810284182349,2.58127163094416,2.03991400112325,3.2382191498269,5.84798775702902,1.79210754838934,2.94933282276679,5.28333999991979,5.97507810586598,7.42013106471715,12.1125341007945,5.13305909657271,2.54805239706646,7.11066703153331,12.3399893376392,11.4011939463794,6.0662933401774,2.74041311325744,3.88406825470758,4.00793775475027,7.11289839741157,6.69824052286711,5.30415643688935,5.12456977878917,5.17390311397101,6.03199638382442,2.47194967734374,3.90418263683761,2.65383165584962,4.36770494858005,2.42925670306433,2.42437626567611,0,12.0040126774734,10.2628886338593,3.83185582812887,5.63131085177825,9.59844369589452,7.49714339731082,12.1330417917906,10.5225138648284,14.1989417887537,10.2556348913443,12.0186264945255,11.6361304953354,12.1680947300818,7.02691610567182,1.61729061793121,5.05445516867349,7.78634866779954,4.81445638962004,7.35686734187113,7.38254732201932,6.32960234910003,6.46346741937615,7.04625461566674,7.96464658757695,4.13925393182425,6.89817577385095,4.9167580843633,7.2139960907219,5.69908904311695,4.72680323683516,5.2237824978325,3.90986059175093,5.7719937377363,5.61770549850588,5.40430604940902,5.11494298912067,4.97101854085205,5.39409937956521,5.22179978236943,6.62885259638589,3.93528463494808,3.70241070929708,4.18561100550734,6.43856163359086,4.78737903705395,4.77223564749093,3.77585167381919,1.86458261955468,2.04679982395465,3.07370161407471,1.8788898626452,10.9350773253346,12.4514580978934,2.97376904685418,2.3800550999719,6.18535926552179,4.41249676534833,5.54130083685001,4.84040459096022,4.66993892074228,4.56541502670142,4.74529061544512,4.94096864172033,6.03204501120647,3.78017296878187,4.874102177978,0.898819408654221,4.32276099749388,3.18626037206988,6.06937283049861,4.68418901699888,6.76246414038483,3.86937522906097,4.46090720485539,5.11991485199326,4.93244989569207,2.36176236767363,3.1399745568275,3.08492909804501,1.1858105083486,3.17005700860579,3.34150291692445,2.47348323623339,1.62288097110802,4.3411888755435,2.29163266603278,2.01387296215567,2.2698931748505,4.94210543738547,1.43768206527355,5.58211421502755,3.12037673114561,4.54641980304801,2.69096120282868,2.41221760681684,4.61882975416512,7.20067364727842,7.17045896344914,6.28056817368196,5.86725620721255,3.01511263395268,5.95109102215034,4.29294025287157,5.35959489961049,5.3151525515706,6.53764551495697,3.76885623846197,7.59813920209941,5.78596234326046,0,1.08781136763742,2.95058563811422,2.20749397043786,12.6834966090356,14.417037450841,8.85248705034047,1.76729649043061,3.47059041357882,5.0757036758563,5.17016154558717,5.9742199488138,4.01037613348309,5.09537755419898,2.42886421004937,3.79932615284705,3.55759000151871,7.71171159412337,3.97432238583152,6.58842733568844,5.04949573996086,4.45419332025846,7.96470830039777,5.09839335925461,6.34879469625977,4.90373207365335,4.13422650033082,6.45613810682248,6.20227903603731,5.81653967164009,3.92147116223193,5.05658812697306,6.32511651449993,5.15677716240934,11.9153862013826,6.12207719706455,5.43306471887569,10.7168517515796,8.6896714484714,8.20496560969525,7.40470592709544,9.13394847343798,5.86679270159276,4.2366414172764,3.96951116498931,4.78170133530292,3.71368181400583,5.54878909339034,5.13301079213487,5.9090723908222,3.78925087618806,8.15871328846243,3.07567585436135,6.60437977482312,2.59272338317596,2.63715839806567,1.6403307326523,2.97411625168479,7.9889862097112,6.29781535456461,5.11339903076368,1.90934123603023,6.80122386199441,4.47302827679067,4.96824567780286,3.97267762427491,6.76923947613151,6.20375993370175,4.3806331534428,4.97336289769656,4.40690909192096,8.07741107013003,20.856638731315,4.18646328923141,6.45288112782681,4.86127970860119,6.58715099736429,5.23763989021412,5.8678619322877,5.07797100891405,5.55754525456268,8.21386010808421,8.64090018773596,4.10814456816632,6.28448167399509,5.03283690107653,4.15746633528944,3.22248052201467,4.76835251475036,5.52899067791857,3.39685912501528,4.03865799792591,3.42930629947499,3.62974266492626,2.63136277997332,3.07877893249054,2.10378423926824,3.17422537061296,6.21560669447381,3.94740969081693,6.04384618910682,4.63655025677257,3.94133198447482,3.84618410961257,7.93163002592544,7.52358156053045,11.2950368523413,11.0478056761722,17.7597609166213,9.79563139359019,13.7016503954128,12.0863023582352,16.2005400055633,14.4102785031751,13.5942722695261,12.9440077937955,6.43481555021895,4.38927360741134,7.17081144167364,3.8897074730927,7.33646069197938,7.53758384645058,5.11167473943715,4.94484137373346,3.20919209591815,3.79045817645696,5.57654459758527,5.09291121742406,3.46473577638565,4.92993673517493,4.42253110958222,5.23923060411381,4.05595140806994,4.82273051159263,7.41754621445952,5.88795680537589,4.80016953339582,3.72699192934609,4.5302876089991,3.48831399917588,4.6113596403512,4.56918882615053,3.29270351170991,4.20911538300549,5.16055632614275,3.92799590160417,4.38949567059444,4.0386837773981,3.6830793885272,4.80304207676495,3.47231899766054,5.49583271463481,4.44470056046276,4.29742108096597,4.01705497344571,5.7353768971074,4.63735671240843
|short_description=p2@LOC100503129,p2@Ywhaq
}}
}}

Latest revision as of 11:59, 26 September 2015

Short description:p2@LOC100503129, p2@Ywhaq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_LOC100503129_5end, CAGE_peak_2_at_Ywhaq_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -3bp_to_ENSMUST00000155480_5end
EntrezGene:100503129,22630
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@LOC100503129p2@Ywhaq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D97.57
Mouse Schwann, donor2.CNhs12573.11746-123F99.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C57.11
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.50
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F114.20
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.03
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G87.96
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F87.17
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C212.68
medulla oblongata, neonate N30.CNhs11200.1396-42A314.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.11
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.80
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D44.97
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A94.38
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F27.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.59e-1323
neuroblast (sensu Vertebrata)3.59e-1323
neuron5.22e-0933
neuronal stem cell5.22e-0933
neuroblast5.22e-0933
electrically signaling cell5.22e-0933
electrically responsive cell4.34e-0739
electrically active cell4.34e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.26e-2354
neurectoderm8.34e-2264
neural plate8.34e-2264
presumptive neural plate8.34e-2264
neural tube1.01e-2152
neural rod1.01e-2152
future spinal cord1.01e-2152
neural keel1.01e-2152
ecto-epithelium4.32e-2073
nervous system1.07e-1975
pre-chordal neural plate4.25e-1949
ectoderm-derived structure6.95e-1995
ectoderm6.95e-1995
presumptive ectoderm6.95e-1995
central nervous system7.43e-1973
brain1.59e-1847
future brain1.59e-1847
anterior neural tube3.42e-1840
regional part of brain3.57e-1846
regional part of forebrain1.34e-1739
forebrain1.34e-1739
future forebrain1.34e-1739
structure with developmental contribution from neural crest2.20e-1792
gray matter4.25e-1734
brain grey matter4.61e-1429
regional part of telencephalon4.61e-1429
telencephalon4.61e-1429
cerebral cortex8.56e-1021
cerebral hemisphere8.56e-1021
pallium8.56e-1021
regional part of cerebral cortex4.34e-0817
occipital lobe4.54e-0710
visual cortex4.54e-0710
neocortex4.54e-0710
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