Personal tools

FFCP PHASE1:Mm9::chr17:46624590..46624631,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=106763
|EntrezGene=106763
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q6PCN3
|UniProt=Q6PCN3
|association_with_transcript=0bp_to_ENSMUST00000047034,NM_001162864,uc008csx.2_5end
|association_with_transcript=0bp_to_ENSMUST00000047034,NM_001162864,uc008csx.2_5end
|cluster_id=chr17:46624590..46624631,-
|description=CAGE_peak_1_at_Ttbk1_5end
|description=CAGE_peak_1_at_Ttbk1_5end
|id=chr17:46624590..46624631,-
|id=chr17:46624590..46624631,-
|ontology_enrichment_celltype=CL:0000221!3.92e-16!44;CL:0000133!3.92e-16!44;CL:0002319!4.10e-16!43;CL:0000540!5.60e-15!33;CL:0000047!5.60e-15!33;CL:0000031!5.60e-15!33;CL:0000404!5.60e-15!33;CL:0000117!2.23e-13!23;CL:0000337!2.23e-13!23;CL:0000055!2.87e-12!50;CL:0000393!1.95e-11!39;CL:0000211!1.95e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.09e-17,44;CL:0000133,2.09e-17,44;CL:0002319,2.27e-17,43;CL:0000540,1.25e-16,33;CL:0000047,1.25e-16,33;CL:0000031,1.25e-16,33;CL:0000404,1.25e-16,33;CL:0000117,1.58e-15,23;CL:0000337,1.58e-15,23;CL:0000393,2.41e-13,39;CL:0000211,2.41e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.66e-36!75;UBERON:0001016!6.66e-36!75;UBERON:0001017!8.40e-36!73;UBERON:0005743!8.40e-36!73;UBERON:0004121!4.42e-32!102;UBERON:0000924!4.42e-32!102;UBERON:0006601!4.42e-32!102;UBERON:0002346!9.01e-32!71;UBERON:0003075!9.01e-32!71;UBERON:0007284!9.01e-32!71;UBERON:0000033!4.89e-28!63;UBERON:0001049!1.16e-27!52;UBERON:0005068!1.16e-27!52;UBERON:0006241!1.16e-27!52;UBERON:0007135!1.16e-27!52;UBERON:0000955!1.29e-26!50;UBERON:0006238!1.29e-26!50;UBERON:0002616!5.72e-26!49;UBERON:0003056!6.39e-24!49;UBERON:0003080!3.28e-21!40;UBERON:0002780!1.56e-20!39;UBERON:0001890!1.56e-20!39;UBERON:0006240!1.56e-20!39;UBERON:0002020!2.63e-20!34;UBERON:0002791!2.26e-17!29;UBERON:0003528!2.26e-17!29;UBERON:0001893!2.26e-17!29;UBERON:0007811!2.87e-14!86;UBERON:0000153!2.32e-13!94;UBERON:0000956!7.26e-13!21;UBERON:0001869!7.26e-13!21;UBERON:0000203!7.26e-13!21;UBERON:0002619!8.23e-11!17;UBERON:0002021!1.45e-08!10;UBERON:0000411!1.45e-08!10;UBERON:0001950!1.45e-08!10;UBERON:0003076!6.27e-07!12;UBERON:0003057!6.27e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.79e-40,75;UBERON:0001017,2.44e-40,73;UBERON:0004121,2.15e-36,95;UBERON:0000924,2.15e-36,95;UBERON:0006601,2.15e-36,95;UBERON:0002346,6.12e-36,64;UBERON:0003075,6.12e-36,64;UBERON:0007284,6.12e-36,64;UBERON:0000073,2.20e-33,54;UBERON:0001049,1.35e-31,52;UBERON:0005068,1.35e-31,52;UBERON:0006241,1.35e-31,52;UBERON:0007135,1.35e-31,52;UBERON:0010371,5.85e-29,73;UBERON:0003056,5.30e-28,49;UBERON:0000955,7.75e-28,47;UBERON:0006238,7.75e-28,47;UBERON:0002616,4.34e-27,46;UBERON:0003080,8.55e-25,40;UBERON:0002780,5.44e-24,39;UBERON:0001890,5.44e-24,39;UBERON:0006240,5.44e-24,39;UBERON:0002020,1.01e-23,34;UBERON:0010314,4.62e-23,92;UBERON:0003528,2.99e-20,29;UBERON:0002791,2.99e-20,29;UBERON:0001893,2.99e-20,29;UBERON:0000956,6.38e-15,21;UBERON:0001869,6.38e-15,21;UBERON:0000203,6.38e-15,21;UBERON:0002619,1.71e-12,17;UBERON:0002021,7.66e-10,10;UBERON:0000411,7.66e-10,10;UBERON:0001950,7.66e-10,10;UBERON:0003076,3.59e-07,12;UBERON:0003057,3.59e-07,12
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.903863264091034,0,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,44.3925974588584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,2.41654801007919,3.11087838518853,1.25987779462826,2.87505128729943,0,0.725362142011344,0,1.02903774414379,0,1.03134418455488,35.0007477287104,33.3264316941381,37.3960528068646,0.338844532069132,0,0,0,0,11.085204089181,16.5213871288268,30.381056406384,36.8566211645515,28.1835448210852,60.8436596780102,43.2902340265163,29.6427734100189,34.1209876824921,43.203282970671,73.7776402695904,68.1850385374902,53.4550735731727,37.5875920031052,42.6332419187229,35.4221091978597,69.2373837523425,36.0168070420275,45.5338778374894,48.6137166031552,41.8572741549363,36.9070902734095,2.34751199332871,1.73814588245607,0,0,0,0,0,0,5.05599912474307,0,0,0,1.83096445709685,0,0,0,0,0,0,5.48082622651488,0.258937883647172,1.63286352971307,2.25530924795977,5.78484408793068,1.84492397804847,2.41156224884196,3.88042733547826,0.502666365318702,0,0,0,0,0,0,0,57.3850362142632,55.9222707191925,0,0,0,0,61.4141621559773,68.1675898199753,41.717244901471,76.3088765644094,83.6189545470181,59.2195926994746,70.2504669083391,0.203678727700633,0,1.0108910337347,3.99839526184301,3.77349284591841,5.28774840196988,7.20248519221397,5.12396380641431,11.0219128625151,7.81493693737584,8.71426038405478,13.9699820199068,1.5089759505299,2.64748512234947,1.23165786914764,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,57.4091559580067,29.8423375899925,0,0,0.853153002140936,2.32236671860439,1.9330119198314,1.4117846723634,1.11189021922435,0.570676878337677,0,1.15289268306808,1.25667604400135,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.379335801906163,0.571242563048644,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,56.353257085715,63.0598873866053,0,0,3.78609863299508,2.34263246577983,10.3403230911743,1.91175038362042,4.45597348164788,3.39691836946599,7.2865926301481,13.151513606009,11.0680577825027,48.1981974632711,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,8.5109901438447,3.06103859853227,5.6917820864412,4.07240366560025,2.12808280370728,7.13475270408282,7.24015690649332,11.5696680663548,0.469343416127421,0.21183207086382,0.882113592219848,0,0,0,0,0,0,55.6275906031529,0.341741761595705,0,0,0,0,0,0,0,0,0,1.26534397432454,2.43983360552218,0.86404272657441,0.836353184057875,0.436725127492355,0.944050424693745,0.41326727862668,0,0.129614973291793,0,232.241490737886,0,0,1.75006069509643,1.42075805825504,0.844780627453891,0.58678619322877,0.5208175393758,1.36317147753424,39.136627573813,83.8167318210389,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.448569283047378,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0,89.2307911334965,81.4775668617703,89.3717000965459,68.225713390444,100.707130406284,89.8918737893744,72.902430025035,79.706852970687,81.5656336171568,92.1613354918239,5.70830411712972,11.9707462020309,8.36594668195257,5.34834777550247,7.54607385460736,6.61836630420051,4.22268782823069,3.91466608753899,6.4183841918363,7.07552192938633,5.57654459758527,5.84741658296836,5.61849044819294,5.37811280200902,5.39893408182765,6.66811167796303,4.98302601562879,6.36600427530227,7.41754621445952,6.62395140604788,5.82877729055206,5.6792257970988,5.7224685587357,6.97662799835177,6.21121910741182,5.58456412085065,3.65855945745545,3.6829759601298,5.02475221229689,6.17256498823512,6.64356101495375,6.10727790728493,6.54769669071503,5.26785260032284,4.05103883060397,16.2376875659665,3.27504251823572,7.09074478359384,2.86932498103265,1.98532277207564,0.927471342481686
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.903863264091034,0,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,44.3925974588584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,2.41654801007919,3.11087838518853,1.25987779462826,2.87505128729943,0,0.725362142011344,0,1.02903774414379,0,1.03134418455488,35.0007477287104,33.3264316941381,37.3960528068646,0.338844532069132,0,0,0,0,11.085204089181,16.5213871288268,30.381056406384,36.8566211645515,28.1835448210852,60.8436596780102,43.2902340265163,29.6427734100189,34.1209876824921,43.203282970671,73.7776402695904,68.1850385374902,53.4550735731727,37.5875920031052,42.6332419187229,35.4221091978597,69.2373837523425,36.0168070420275,45.5338778374894,48.6137166031552,41.8572741549363,36.9070902734095,2.34751199332871,1.73814588245607,0,0,0,0,0,0,5.05599912474307,0,0,0,1.83096445709685,0,0,0,0,0,0,5.48082622651488,0.258937883647172,1.63286352971307,2.25530924795977,5.78484408793068,1.84492397804847,2.41156224884196,3.88042733547826,0.502666365318702,0,0,0,0,0,0,0,57.3850362142632,55.9222707191925,0,0,0,0,61.4141621559773,68.1675898199753,41.717244901471,76.3088765644094,83.6189545470181,59.2195926994746,70.2504669083391,0.203678727700633,0,1.0108910337347,3.99839526184301,3.77349284591841,5.28774840196988,7.20248519221397,5.12396380641431,11.0219128625151,7.81493693737584,8.71426038405478,13.9699820199068,1.5089759505299,2.64748512234947,1.23165786914764,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,57.4091559580067,29.8423375899925,0,0,0.853153002140936,2.32236671860439,1.9330119198314,1.4117846723634,1.11189021922435,0.570676878337677,0,1.15289268306808,1.25667604400135,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.379335801906163,0.571242563048644,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,56.353257085715,63.0598873866053,0,0,3.78609863299508,2.34263246577983,10.3403230911743,1.91175038362042,4.45597348164788,3.39691836946599,7.2865926301481,13.151513606009,11.0680577825027,48.1981974632711,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,8.5109901438447,3.06103859853227,5.6917820864412,4.07240366560025,2.12808280370728,7.13475270408282,7.24015690649332,11.5696680663548,0.469343416127421,0.21183207086382,0.882113592219848,0,0,0,0,0,0,55.6275906031529,0.341741761595705,0,0,0,0,0,0,0,0,0,1.26534397432454,2.43983360552218,0.86404272657441,0.836353184057875,0.436725127492355,0.944050424693745,0.41326727862668,0,0.129614973291793,0,232.241490737886,0,0,1.75006069509643,1.42075805825504,0.844780627453891,0.58678619322877,0.5208175393758,1.36317147753424,39.136627573813,83.8167318210389,0.316011120628178,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.448569283047378,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0,89.2307911334965,81.4775668617703,89.3717000965459,68.225713390444,100.707130406284,89.8918737893744,72.902430025035,79.706852970687,81.5656336171568,92.1613354918239,5.70830411712972,11.9707462020309,8.36594668195257,5.34834777550247,7.54607385460736,6.61836630420051,4.22268782823069,3.91466608753899,6.4183841918363,7.07552192938633,5.57654459758527,5.84741658296836,5.61849044819294,5.37811280200902,5.39893408182765,6.66811167796303,4.98302601562879,6.36600427530227,7.41754621445952,6.62395140604788,5.82877729055206,5.6792257970988,5.7224685587357,6.97662799835177,6.21121910741182,5.58456412085065,3.65855945745545,3.6829759601298,5.02475221229689,6.17256498823512,6.64356101495375,6.10727790728493,6.54769669071503,5.26785260032284,4.05103883060397,16.2376875659665,3.27504251823572,7.09074478359384,2.86932498103265,1.98532277207564,0.927471342481686
|short_description=p1@Ttbk1
|short_description=p1@Ttbk1
}}
}}

Latest revision as of 13:38, 26 September 2015

Short description:p1@Ttbk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ttbk1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000047034, NM_001162864, uc008csx.2_5end
EntrezGene:Ttbk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ttbk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C335.00
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C737.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F536.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D373.78
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F368.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D753.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E469.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.91
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B257.39
cerebellum, neonate N30.CNhs11135.1395-42I255.92
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A461.41
corpus striatum, adult.CNhs10487.19-21D868.17
corpus striatum, neonate N00.CNhs11226.630-43F141.72
cortex, adult.CNhs10473.12-14D576.31
cortex, neonate N30.CNhs11107.1392-42F283.62
diencephalon, adult.CNhs10482.20-12F259.22
diencephalon, neonate N30.CNhs11201.1388-42B270.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C611.02
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G88.71
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E857.41
hippocampus, neonate N00.CNhs11228.627-43G129.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C256.35
medulla oblongata, neonate N30.CNhs11200.1396-42A363.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I948.20
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C75.69
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C955.63
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5232.24
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H339.14
testis, neonate N30.CNhs11130.1391-42E283.82
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A189.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A281.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A389.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4100.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A589.89
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A672.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A779.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A881.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.16
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.09e-1744
neurectodermal cell2.09e-1744
neural cell2.27e-1743
neuron1.25e-1633
neuronal stem cell1.25e-1633
neuroblast1.25e-1633
electrically signaling cell1.25e-1633
CNS neuron (sensu Vertebrata)1.58e-1523
neuroblast (sensu Vertebrata)1.58e-1523
electrically responsive cell2.41e-1339
electrically active cell2.41e-1339

Uber anatomy
Ontology termp-valuen
nervous system1.79e-4075
central nervous system2.44e-4073
ectoderm-derived structure2.15e-3695
ectoderm2.15e-3695
presumptive ectoderm2.15e-3695
neurectoderm6.12e-3664
neural plate6.12e-3664
presumptive neural plate6.12e-3664
regional part of nervous system2.20e-3354
neural tube1.35e-3152
neural rod1.35e-3152
future spinal cord1.35e-3152
neural keel1.35e-3152
ecto-epithelium5.85e-2973
pre-chordal neural plate5.30e-2849
brain7.75e-2847
future brain7.75e-2847
regional part of brain4.34e-2746
anterior neural tube8.55e-2540
regional part of forebrain5.44e-2439
forebrain5.44e-2439
future forebrain5.44e-2439
gray matter1.01e-2334
structure with developmental contribution from neural crest4.62e-2392
brain grey matter2.99e-2029
regional part of telencephalon2.99e-2029
telencephalon2.99e-2029
cerebral cortex6.38e-1521
cerebral hemisphere6.38e-1521
pallium6.38e-1521
regional part of cerebral cortex1.71e-1217
occipital lobe7.66e-1010
visual cortex7.66e-1010
neocortex7.66e-1010
posterior neural tube3.59e-0712
chordal neural plate3.59e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:46624590..46624631,-&oldid=4256155"