Personal tools

FFCP PHASE1:Mm9::chr7:30089006..30089022,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:30089006..30089022,+
|DHSsupport=NA
|short_description=p3@Dpf1
|DPIdataset=NA
|description=CAGE_peak_3_at_Dpf1_5end
|association_with_transcript=-1bp_to_NM_013874,uc009gbo.1_5end
|EntrezGene=29861
|EntrezGene=29861
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q6GTK4,Q9QX66
|UniProt=Q6GTK4,Q9QX66
|association_with_transcript=-1bp_to_NM_013874,uc009gbo.1_5end
|cluster_id=chr7:30089006..30089022,+
|description=CAGE_peak_3_at_Dpf1_5end
|id=chr7:30089006..30089022,+
|ontology_enrichment_celltype=CL:0000117!8.37e-13!23;CL:0000337!8.37e-13!23;CL:0002319!8.10e-11!43;CL:0000221!2.92e-10!44;CL:0000133!2.92e-10!44;CL:0000055!3.22e-09!50;CL:0000540!3.63e-08!33;CL:0000047!3.63e-08!33;CL:0000031!3.63e-08!33;CL:0000404!3.63e-08!33;CL:0000393!4.07e-07!39;CL:0000211!4.07e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.92e-20,23;CL:0000337,3.92e-20,23;CL:0002319,3.50e-14,43;CL:0000221,1.06e-13,44;CL:0000133,1.06e-13,44;CL:0000540,2.61e-12,33;CL:0000047,2.61e-12,33;CL:0000031,2.61e-12,33;CL:0000404,2.61e-12,33;CL:0002609,1.25e-10,6;CL:0000393,1.37e-09,39;CL:0000211,1.37e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.70e-20!34;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0001017!1.53e-19!73;UBERON:0005743!1.53e-19!73;UBERON:0001049!1.61e-19!52;UBERON:0005068!1.61e-19!52;UBERON:0006241!1.61e-19!52;UBERON:0007135!1.61e-19!52;UBERON:0003056!6.82e-17!49;UBERON:0002791!2.22e-16!29;UBERON:0003528!2.22e-16!29;UBERON:0001893!2.22e-16!29;UBERON:0002346!2.94e-16!71;UBERON:0003075!2.94e-16!71;UBERON:0007284!2.94e-16!71;UBERON:0000955!3.11e-16!50;UBERON:0006238!3.11e-16!50;UBERON:0003080!1.07e-15!40;UBERON:0002616!1.22e-15!49;UBERON:0002780!2.07e-15!39;UBERON:0001890!2.07e-15!39;UBERON:0006240!2.07e-15!39;UBERON:0000033!3.46e-15!63;UBERON:0000956!8.82e-14!21;UBERON:0001869!8.82e-14!21;UBERON:0000203!8.82e-14!21;UBERON:0004121!2.01e-13!102;UBERON:0000924!2.01e-13!102;UBERON:0006601!2.01e-13!102;UBERON:0002619!1.00e-10!17;UBERON:0007811!3.17e-09!86;UBERON:0000153!8.73e-09!94;UBERON:0002021!4.22e-07!10;UBERON:0000411!4.22e-07!10;UBERON:0001950!4.22e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.47e-24,34;UBERON:0001017,1.35e-20,73;UBERON:0001016,9.43e-20,75;UBERON:0000073,5.00e-19,54;UBERON:0001049,1.15e-18,52;UBERON:0005068,1.15e-18,52;UBERON:0006241,1.15e-18,52;UBERON:0007135,1.15e-18,52;UBERON:0003528,4.57e-18,29;UBERON:0002791,4.57e-18,29;UBERON:0001893,4.57e-18,29;UBERON:0002346,8.78e-17,64;UBERON:0003075,8.78e-17,64;UBERON:0007284,8.78e-17,64;UBERON:0000956,2.23e-16,21;UBERON:0001869,2.23e-16,21;UBERON:0000203,2.23e-16,21;UBERON:0004121,4.38e-16,95;UBERON:0000924,4.38e-16,95;UBERON:0006601,4.38e-16,95;UBERON:0000955,1.02e-14,47;UBERON:0006238,1.02e-14,47;UBERON:0002780,1.66e-14,39;UBERON:0001890,1.66e-14,39;UBERON:0006240,1.66e-14,39;UBERON:0003080,5.60e-14,40;UBERON:0002616,8.04e-14,46;UBERON:0010371,1.46e-13,73;UBERON:0003056,2.20e-13,49;UBERON:0002619,3.95e-11,17;UBERON:0010314,6.44e-09,92;UBERON:0002021,1.20e-08,10;UBERON:0000411,1.20e-08,10;UBERON:0001950,1.20e-08,10;UBERON:0001948,2.41e-08,5;UBERON:0002315,2.41e-08,5;UBERON:0002240,7.76e-07,6;UBERON:0005174,7.76e-07,6;UBERON:0001137,7.76e-07,6
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,1.52617609466313,0.878744730937887,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,11.5320382689971,9.52183762689659,11.4089652631112,1.0165335962074,0,0,0,0,0,1.92109152660777,12.3390638647088,10.3954572515402,9.25429829946081,4.57041575046086,3.09215957332259,10.0442455356262,9.77623804386011,11.9498442259303,0,1.27687338085188,0.307213066512487,8.04506355154182,7.22752384459036,8.85552729946492,0.279182999001381,0,0.61119299110724,5.59794312399969,4.41352210477219,10.0655700745662,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,12.4397808591736,2.25971616249959,2.81287003063364,1.0389402227978,1.62241263067758,0.203678727700633,0,0,0,1.04096354370163,0.689706313300419,0.900310649026746,0.452114453507145,1.02054748726992,0.896796041993948,1.12442069471675,0,0.431135985865684,0.189106080167819,1.05570674498369,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,8.02655976558419,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.977789858652155,0.509235257325564,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.35163505977661,0.491804836130026,0,0.631016438832513,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.60660658210904,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.82375921308533,3.22227665555024,4.01026859407578,5.67115501734169,0.685082519770642,1.5107877947794,2.70009000092722,1.80128481289688,0.906284817968409,1.55328093525546,1.45302286617847,1.99512436700516,0.512200817262403,1.21553358534147,1.25767897576789,1.47074806760011,0.222246727801615,1.03017528619447,0.962757628775446,1.01078884705519,1.01391719956096,0.943131706930381,1.03005658216871,1.28050304809739,1.49332219284595,1.42888107384922,0.927074607558844,0.578727661391115,1.23625770240992,0.441596760403192,1.02860775715625,1.24233064311536,0.715308569841963,1.0174249164263,0.846984423737976,0.930760686808441,1.82927972872773,0.789209134313529,1.08643291076689,0.561142271657738,0.949080144993393,1.77308068276014,0.409231043169689,1.23949472948773,0.771626443924566,1.99848462350357,0.701794825336225,0.429742108096597,0.191288332068843,0,0
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,1.52617609466313,0.878744730937887,0.58328969722285,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,11.5320382689971,9.52183762689659,11.4089652631112,1.0165335962074,0,0,0,0,0,1.92109152660777,12.3390638647088,10.3954572515402,9.25429829946081,4.57041575046086,3.09215957332259,10.0442455356262,9.77623804386011,11.9498442259303,0,1.27687338085188,0.307213066512487,8.04506355154182,7.22752384459036,8.85552729946492,0.279182999001381,0,0.61119299110724,5.59794312399969,4.41352210477219,10.0655700745662,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.599162557619291,0.915001205637253,12.4397808591736,2.25971616249959,2.81287003063364,1.0389402227978,1.62241263067758,0.203678727700633,0,0,0,1.04096354370163,0.689706313300419,0.900310649026746,0.452114453507145,1.02054748726992,0.896796041993948,1.12442069471675,0,0.431135985865684,0.189106080167819,1.05570674498369,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,8.02655976558419,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.977789858652155,0.509235257325564,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.35163505977661,0.491804836130026,0,0.631016438832513,0,0,0,0,0,0.404810701674894,0,0.395287777946524,1.60660658210904,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.82375921308533,3.22227665555024,4.01026859407578,5.67115501734169,0.685082519770642,1.5107877947794,2.70009000092722,1.80128481289688,0.906284817968409,1.55328093525546,1.45302286617847,1.99512436700516,0.512200817262403,1.21553358534147,1.25767897576789,1.47074806760011,0.222246727801615,1.03017528619447,0.962757628775446,1.01078884705519,1.01391719956096,0.943131706930381,1.03005658216871,1.28050304809739,1.49332219284595,1.42888107384922,0.927074607558844,0.578727661391115,1.23625770240992,0.441596760403192,1.02860775715625,1.24233064311536,0.715308569841963,1.0174249164263,0.846984423737976,0.930760686808441,1.82927972872773,0.789209134313529,1.08643291076689,0.561142271657738,0.949080144993393,1.77308068276014,0.409231043169689,1.23949472948773,0.771626443924566,1.99848462350357,0.701794825336225,0.429742108096597,0.191288332068843,0,0
|short_description=p3@Dpf1
}}
}}

Latest revision as of 13:54, 26 September 2015

Short description:p3@Dpf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dpf1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -1bp_to_NM_013874, uc009gbo.1_5end
EntrezGene:Dpf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dpf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F112.44
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.47e-2434
central nervous system1.35e-2073
nervous system9.43e-2075
regional part of nervous system5.00e-1954
neural tube1.15e-1852
neural rod1.15e-1852
future spinal cord1.15e-1852
neural keel1.15e-1852
brain grey matter4.57e-1829
regional part of telencephalon4.57e-1829
telencephalon4.57e-1829
neurectoderm8.78e-1764
neural plate8.78e-1764
presumptive neural plate8.78e-1764
cerebral cortex2.23e-1621
cerebral hemisphere2.23e-1621
pallium2.23e-1621
ectoderm-derived structure4.38e-1695
ectoderm4.38e-1695
presumptive ectoderm4.38e-1695
brain1.02e-1447
future brain1.02e-1447
regional part of forebrain1.66e-1439
forebrain1.66e-1439
future forebrain1.66e-1439
anterior neural tube5.60e-1440
regional part of brain8.04e-1446
ecto-epithelium1.46e-1373
pre-chordal neural plate2.20e-1349
regional part of cerebral cortex3.95e-1117
structure with developmental contribution from neural crest6.44e-0992
occipital lobe1.20e-0810
visual cortex1.20e-0810
neocortex1.20e-0810
regional part of spinal cord2.41e-085
gray matter of spinal cord2.41e-085
spinal cord7.76e-076
dorsal region element7.76e-076
dorsum7.76e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:30089006..30089022,%2B&oldid=4256743"