Personal tools

FFCP PHASE1:Mm9::chr4:15076124..15076156,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69352
|EntrezGene=69352
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-16bp_to_ENSMUST00000141105_5end
|association_with_transcript=-16bp_to_ENSMUST00000141105_5end
|cluster_id=chr4:15076124..15076156,-
|description=CAGE_peak_2_at_Necab1_5end
|description=CAGE_peak_2_at_Necab1_5end
|id=chr4:15076124..15076156,-
|id=chr4:15076124..15076156,-
|ontology_enrichment_celltype=CL:0000117!5.86e-09!23;CL:0000337!5.86e-09!23;CL:0000540!9.38e-07!33;CL:0000047!9.38e-07!33;CL:0000031!9.38e-07!33;CL:0000404!9.38e-07!33
|ontology_enrichment_celltype=CL:0000117!5.86e-09!23;CL:0000337!5.86e-09!23;CL:0000540!9.38e-07!33;CL:0000047!9.38e-07!33;CL:0000031!9.38e-07!33;CL:0000404!9.38e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.99e-08,23;CL:0000337,1.99e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.47e-18!71;UBERON:0003075!2.47e-18!71;UBERON:0007284!2.47e-18!71;UBERON:0000033!1.28e-16!63;UBERON:0004121!1.36e-16!102;UBERON:0000924!1.36e-16!102;UBERON:0006601!1.36e-16!102;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0000955!7.80e-16!50;UBERON:0006238!7.80e-16!50;UBERON:0000073!1.21e-15!75;UBERON:0001016!1.21e-15!75;UBERON:0001017!1.96e-15!73;UBERON:0005743!1.96e-15!73;UBERON:0002616!3.64e-15!49;UBERON:0003056!5.26e-15!49;UBERON:0002020!3.24e-14!34;UBERON:0003080!1.05e-12!40;UBERON:0002780!4.18e-12!39;UBERON:0001890!4.18e-12!39;UBERON:0006240!4.18e-12!39;UBERON:0002791!1.65e-11!29;UBERON:0003528!1.65e-11!29;UBERON:0001893!1.65e-11!29;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0000025!1.14e-08!114;UBERON:0000956!2.02e-08!21;UBERON:0001869!2.02e-08!21;UBERON:0000203!2.02e-08!21;UBERON:0004111!5.07e-08!122;UBERON:0002619!1.77e-07!17;UBERON:0007811!5.63e-07!86
|ontology_enrichment_uberon=UBERON:0002346!2.47e-18!71;UBERON:0003075!2.47e-18!71;UBERON:0007284!2.47e-18!71;UBERON:0000033!1.28e-16!63;UBERON:0004121!1.36e-16!102;UBERON:0000924!1.36e-16!102;UBERON:0006601!1.36e-16!102;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0000955!7.80e-16!50;UBERON:0006238!7.80e-16!50;UBERON:0000073!1.21e-15!75;UBERON:0001016!1.21e-15!75;UBERON:0001017!1.96e-15!73;UBERON:0005743!1.96e-15!73;UBERON:0002616!3.64e-15!49;UBERON:0003056!5.26e-15!49;UBERON:0002020!3.24e-14!34;UBERON:0003080!1.05e-12!40;UBERON:0002780!4.18e-12!39;UBERON:0001890!4.18e-12!39;UBERON:0006240!4.18e-12!39;UBERON:0002791!1.65e-11!29;UBERON:0003528!1.65e-11!29;UBERON:0001893!1.65e-11!29;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0000025!1.14e-08!114;UBERON:0000956!2.02e-08!21;UBERON:0001869!2.02e-08!21;UBERON:0000203!2.02e-08!21;UBERON:0004111!5.07e-08!122;UBERON:0002619!1.77e-07!17;UBERON:0007811!5.63e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.60e-19,54;UBERON:0002346,4.83e-18,64;UBERON:0003075,4.83e-18,64;UBERON:0007284,4.83e-18,64;UBERON:0001049,4.01e-17,52;UBERON:0005068,4.01e-17,52;UBERON:0006241,4.01e-17,52;UBERON:0007135,4.01e-17,52;UBERON:0002020,7.06e-17,34;UBERON:0001016,5.62e-15,75;UBERON:0001017,7.48e-15,73;UBERON:0010371,6.59e-14,73;UBERON:0000955,9.15e-14,47;UBERON:0006238,9.15e-14,47;UBERON:0003528,3.21e-13,29;UBERON:0002791,3.21e-13,29;UBERON:0001893,3.21e-13,29;UBERON:0003056,5.21e-13,49;UBERON:0002616,5.77e-13,46;UBERON:0004121,6.21e-13,95;UBERON:0000924,6.21e-13,95;UBERON:0006601,6.21e-13,95;UBERON:0002021,1.57e-11,10;UBERON:0000411,1.57e-11,10;UBERON:0001950,1.57e-11,10;UBERON:0003080,1.95e-11,40;UBERON:0002780,1.03e-10,39;UBERON:0001890,1.03e-10,39;UBERON:0006240,1.03e-10,39;UBERON:0010314,9.98e-10,92;UBERON:0000956,1.05e-09,21;UBERON:0001869,1.05e-09,21;UBERON:0000203,1.05e-09,21;UBERON:0000025,3.29e-09,114;UBERON:0002619,4.25e-09,17;UBERON:0004111,1.39e-08,122;UBERON:0003076,8.46e-07,12;UBERON:0003057,8.46e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,1.24427534770173,0.540023753326763,1.26194976810829,5.71301968807607,4.8591079009355,0.61245399607477,0.383381884072945,2.75765635983006,13.2139057199266,26.8143409978894,14.1318010595744,1.18697658957174,1.46380229763855,0.52091337055676,3.35019598801657,10.1297269805702,10.0846843532695,8.83885756421003,11.10499110233,3.91438836233131,0.075726193333184,3.24957708459178,0,4.30211938490693,4.0798280022465,13.4925797909454,11.695975514058,6.72040330646003,2.38755514223978,0,0,0,0.563373679106722,0,0,0,0,0,0,2.62622923353838,0,3.56261133755579,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0.441683036920787,0,3.72783522436244,4.68449275218475,3.97948742945565,0.255457055208591,0,0,0,13.6309481858389,32.9400434029411,6.78533501409468,34.0695667576862,25.0601148183724,26.1812936145046,19.6311928311987,0.305518091550949,0,0.758168275301024,2.73574412652416,0.260240885925407,0.459804208866946,0.540186389416048,1.20563854268572,2.31324097114515,4.09963904911519,3.5606655332697,11.9003550539947,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0.823128545631774,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.810688095458557,1.02339991197733,0,1.07365135008297,13.6688466566683,3.60166143327496,0,0.528901133327089,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.190225626112559,0,0.658795818896044,0,0.596869416123452,0.974820435595601,1.79763881730844,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,4.74324203339438,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,1.68824011826692,0.25462585178142,0.287696137450811,0.324270453550071,2.47105271869273,4.31304619582064,4.09355042435354,4.99260276983297,5.30415643688935,6.63770430031075,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,10.7568895291821,8.55645312123083,0,0.504941854408746,0,0.390438744296638,1.29254038639679,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.790575555893047,26.9909905794318,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.987294123612726,0.608929898229199,0,0,1.32317038832977,0.65954501176592,0.161464426695906,0.180938774784468,0.596861720015682,0.656563598980245,0.291480836629851,10.7546675166096,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.540026704109006,0.836353184057875,0.436725127492355,0.809186078308924,1.65306911450672,1.30877970992015,0,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,2.19642963138012,1.99507305697782,0.39061315453185,1.36317147753424,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,2.70465431645067,0,0,0,0,34.4498623996411,33.1434170285167,41.2484769676366,25.2624178045221,39.0497036269266,30.9711497929777,31.7260575108949,31.5224842256954,43.0485288534994,26.9235362110946,0,1.59609949360412,0.682934423016537,0.729320151204882,1.46729213839588,0.919217542250071,2.889207461421,1.23621034343337,1.60459604795908,1.76888048234658,1.2673964994512,1.69763707247469,1.87283014939765,1.34452820050225,1.78049953762401,1.42888107384922,1.50649623728312,2.50781986602817,2.47251540481984,1.03039244094078,1.02860775715625,1.59728225543404,0.476872379894642,1.59881058295561,1.2234219453993,1.35383372626682,1.82927972872773,2.63069711437843,1.08643291076689,0,1.30498519936592,1.37906275325789,2.45538625901814,1.39443157067369,0.578719832943424,1.74867404556562,2.10538447600868,2.14871054048298,0.57386499620653,0.441182838239031,2.31867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,1.24427534770173,0.540023753326763,1.26194976810829,5.71301968807607,4.8591079009355,0.61245399607477,0.383381884072945,2.75765635983006,13.2139057199266,26.8143409978894,14.1318010595744,1.18697658957174,1.46380229763855,0.52091337055676,3.35019598801657,10.1297269805702,10.0846843532695,8.83885756421003,11.10499110233,3.91438836233131,0.075726193333184,3.24957708459178,0,4.30211938490693,4.0798280022465,13.4925797909454,11.695975514058,6.72040330646003,2.38755514223978,0,0,0,0.563373679106722,0,0,0,0,0,0,2.62622923353838,0,3.56261133755579,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0.441683036920787,0,3.72783522436244,4.68449275218475,3.97948742945565,0.255457055208591,0,0,0,13.6309481858389,32.9400434029411,6.78533501409468,34.0695667576862,25.0601148183724,26.1812936145046,19.6311928311987,0.305518091550949,0,0.758168275301024,2.73574412652416,0.260240885925407,0.459804208866946,0.540186389416048,1.20563854268572,2.31324097114515,4.09963904911519,3.5606655332697,11.9003550539947,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0.823128545631774,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.810688095458557,1.02339991197733,0,1.07365135008297,13.6688466566683,3.60166143327496,0,0.528901133327089,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.190225626112559,0,0.658795818896044,0,0.596869416123452,0.974820435595601,1.79763881730844,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,4.74324203339438,0.166845105716094,0.589676985339609,0.224862112384854,0.405720242777006,1.68824011826692,0.25462585178142,0.287696137450811,0.324270453550071,2.47105271869273,4.31304619582064,4.09355042435354,4.99260276983297,5.30415643688935,6.63770430031075,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,10.7568895291821,8.55645312123083,0,0.504941854408746,0,0.390438744296638,1.29254038639679,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.790575555893047,26.9909905794318,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.987294123612726,0.608929898229199,0,0,1.32317038832977,0.65954501176592,0.161464426695906,0.180938774784468,0.596861720015682,0.656563598980245,0.291480836629851,10.7546675166096,0,0,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,0.406638934253697,0.540026704109006,0.836353184057875,0.436725127492355,0.809186078308924,1.65306911450672,1.30877970992015,0,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,2.19642963138012,1.99507305697782,0.39061315453185,1.36317147753424,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,2.70465431645067,0,0,0,0,34.4498623996411,33.1434170285167,41.2484769676366,25.2624178045221,39.0497036269266,30.9711497929777,31.7260575108949,31.5224842256954,43.0485288534994,26.9235362110946,0,1.59609949360412,0.682934423016537,0.729320151204882,1.46729213839588,0.919217542250071,2.889207461421,1.23621034343337,1.60459604795908,1.76888048234658,1.2673964994512,1.69763707247469,1.87283014939765,1.34452820050225,1.78049953762401,1.42888107384922,1.50649623728312,2.50781986602817,2.47251540481984,1.03039244094078,1.02860775715625,1.59728225543404,0.476872379894642,1.59881058295561,1.2234219453993,1.35383372626682,1.82927972872773,2.63069711437843,1.08643291076689,0,1.30498519936592,1.37906275325789,2.45538625901814,1.39443157067369,0.578719832943424,1.74867404556562,2.10538447600868,2.14871054048298,0.57386499620653,0.441182838239031,2.31867835620421
|short_description=p2@Necab1
|short_description=p2@Necab1
}}
}}

Latest revision as of 18:38, 26 September 2015

Short description:p2@Necab1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Necab1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -16bp_to_ENSMUST00000141105_5end
EntrezGene:Necab1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Necab1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D534.07
cortex, neonate N30.CNhs11107.1392-42F225.06
diencephalon, adult.CNhs10482.20-12F226.18
diencephalon, neonate N30.CNhs11201.1388-42B219.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I926.99
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.97
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.99e-0823
neuroblast (sensu Vertebrata)1.99e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.60e-1954
neurectoderm4.83e-1864
neural plate4.83e-1864
presumptive neural plate4.83e-1864
neural tube4.01e-1752
neural rod4.01e-1752
future spinal cord4.01e-1752
neural keel4.01e-1752
gray matter7.06e-1734
nervous system5.62e-1575
central nervous system7.48e-1573
ecto-epithelium6.59e-1473
brain9.15e-1447
future brain9.15e-1447
brain grey matter3.21e-1329
regional part of telencephalon3.21e-1329
telencephalon3.21e-1329
pre-chordal neural plate5.21e-1349
regional part of brain5.77e-1346
ectoderm-derived structure6.21e-1395
ectoderm6.21e-1395
presumptive ectoderm6.21e-1395
occipital lobe1.57e-1110
visual cortex1.57e-1110
neocortex1.57e-1110
anterior neural tube1.95e-1140
regional part of forebrain1.03e-1039
forebrain1.03e-1039
future forebrain1.03e-1039
structure with developmental contribution from neural crest9.98e-1092
cerebral cortex1.05e-0921
cerebral hemisphere1.05e-0921
pallium1.05e-0921
tube3.29e-09114
regional part of cerebral cortex4.25e-0917
anatomical conduit1.39e-08122
posterior neural tube8.46e-0712
chordal neural plate8.46e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:15076124..15076156,-&oldid=4268206"