FFCP PHASE1:Mm9::chr2:6793581..6793625,-: Difference between revisions
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{{FFCP|EntrezGene=14007|HGNC=|MCL_coexpression_id=1325|UniProt=|association_with_transcript=17bp_to_ENSMUST00000150624_5end|description=CAGE_peak_7_at_Celf2_5end|id=chr2:6793581..6793625,-|ontology_enrichment_celltype=CL:0000221!1.64e-12!44;CL:0000133!1.64e-12!44;CL:0002319!4.26e-12!43;CL:0000540!9.36e-12!33;CL:0000047!9.36e-12!33;CL:0000031!9.36e-12!33;CL:0000404!9.36e-12!33;CL:0000055!9.93e-09!50;CL:0000393!5.44e-08!39;CL:0000211!5.44e-08!39;CL:0000117!4.23e-07!23;CL:0000337!4.23e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,3.88e-13,44;CL:0000133,3.88e-13,44;CL:0002319,1.06e-12,43;CL:0000540,3.45e-12,33;CL:0000047,3.45e-12,33;CL:0000031,3.45e-12,33;CL:0000404,3.45e-12,33;CL:0000393,2.58e-08,39;CL:0000211,2.58e-08,39;CL:0000117,2.45e-07,23;CL:0000337,2.45e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.76e-26!102;UBERON:0000924!1.76e-26!102;UBERON:0006601!1.76e-26!102;UBERON:0001017!7.28e-26!73;UBERON:0005743!7.28e-26!73;UBERON:0000073!2.14e-25!75;UBERON:0001016!2.14e-25!75;UBERON:0000033!3.24e-25!63;UBERON:0003056!1.57e-21!49;UBERON:0000955!1.61e-20!50;UBERON:0006238!1.61e-20!50;UBERON:0002616!7.82e-20!49;UBERON:0002346!1.04e-19!71;UBERON:0003075!1.04e-19!71;UBERON:0007284!1.04e-19!71;UBERON:0001049!7.74e-18!52;UBERON:0005068!7.74e-18!52;UBERON:0006241!7.74e-18!52;UBERON:0007135!7.74e-18!52;UBERON:0003080!1.30e-17!40;UBERON:0002780!3.80e-17!39;UBERON:0001890!3.80e-17!39;UBERON:0006240!3.80e-17!39;UBERON:0002791!1.01e-15!29;UBERON:0003528!1.01e-15!29;UBERON:0001893!1.01e-15!29;UBERON:0002020!1.38e-14!34;UBERON:0007811!2.32e-14!86;UBERON:0000153!1.36e-13!94;UBERON:0000956!3.31e-13!21;UBERON:0001869!3.31e-13!21;UBERON:0000203!3.31e-13!21;UBERON:0000468!5.41e-11!333;UBERON:0002619!1.61e-10!17;UBERON:0000922!2.79e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.45e-31,95;UBERON:0000924,1.45e-31,95;UBERON:0006601,1.45e-31,95;UBERON:0001017,4.30e-27,73;UBERON:0001016,1.34e-26,75;UBERON:0010371,1.78e-25,73;UBERON:0002346,6.63e-25,64;UBERON:0003075,6.63e-25,64;UBERON:0007284,6.63e-25,64;UBERON:0003056,2.21e-22,49;UBERON:0000955,3.92e-20,47;UBERON:0006238,3.92e-20,47;UBERON:0000073,4.74e-20,54;UBERON:0002616,2.00e-19,46;UBERON:0001049,1.04e-18,52;UBERON:0005068,1.04e-18,52;UBERON:0006241,1.04e-18,52;UBERON:0007135,1.04e-18,52;UBERON:0003080,2.70e-18,40;UBERON:0002780,8.25e-18,39;UBERON:0001890,8.25e-18,39;UBERON:0006240,8.25e-18,39;UBERON:0003528,2.52e-16,29;UBERON:0002791,2.52e-16,29;UBERON:0001893,2.52e-16,29;UBERON:0002020,3.86e-15,34;UBERON:0010314,2.61e-14,92;UBERON:0000956,1.06e-13,21;UBERON:0001869,1.06e-13,21;UBERON:0000203,1.06e-13,21;UBERON:0002619,6.70e-11,17;UBERON:0002021,9.24e-07,10;UBERON:0000411,9.24e-07,10;UBERON:0001950,9.24e-07,10|phase1_expression=4.48416771893423,0,0,0,0,0,0.233612640595526,0,0.422366166455,0.468129052643987,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,1.01376931219515,0,0,15.4797861030117,6.59058548203415,12.2490836416799,4.19959264876088,4.31257693094915,0,0,0,0,0.286533439938757,1.03134418455488,3.64169629547276,3.1739458756322,3.1691570175309,0,1.77858959222228,0,0,0,1.79760066311043,3.84218305321555,32.558538264862,28.8912708029818,31.1280942800045,2.28520787523043,1.10434270475807,19.4760370751777,19.1690942036473,10.1114066527102,6.60695285996332,8.42736431362239,5.37622866396852,8.30883612700221,4.02545631850602,5.2091337055676,4.74611098302348,4.50210088025344,7.02871939773326,2.94628585473668,3.55929201997757,2.98239113320481,2.12033341332915,1.66257432234928,0.289864488701678,2.58127163094416,0.679971333707751,1.07940638327563,0.649776417447669,2.68816132258401,2.94933282276679,0,0,0,6.76048414928066,0,0,0,1.73192832808971,2.28023878927589,1.01104889002957,1.82694207550496,0.776813650941515,0.148442139064825,1.21439728736295,0.608930956624282,0.461230994512117,0.301445281105245,1.41106448562846,1.50799909595611,1.23597483867187,15.7613299042704,0,4.04417124868523,4.19598885074748,1.93950101254089,1.86391761218122,12.8823550685081,9.21565509979202,0.255457055208591,0,0,0,7.04016005202667,10.0650132620098,8.29318723944905,10.4294592115366,14.3200656104985,4.98691306942944,10.058958310201,3.05518091550949,2.11491850037158,1.51633655060205,5.05060454127538,3.12289063110489,4.36813998423599,5.94205028357652,8.28876498096433,13.4712268319629,13.4519406299092,13.5867500611607,12.6764651662118,1.07783996466421,2.26927296201383,2.99116911078713,1.7535658594206,2.22437799380478,3.1342694986995,1.4404749548556,0.796137067273973,0,0,0.284163499395593,1.65700618028402,2.11073453982987,1.62055855314913,1.65721314909647,0.787056926989615,1.69693824176116,1.16266972375204,1.60964040839772,1.28441876603886,0.987359099480883,0.820837320395476,0.891756905004413,1.16959989940266,1.3173006917463,1.47627060636409,9.46304768538573,15.1269780197548,0,0.528901133327089,1.70630600428187,3.483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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14007 | |||
|HGNC= | |||
|MCL_coexpression_id=1325 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENSMUST00000150624_5end | |||
|cluster_id=chr2:6793581..6793625,- | |||
|description=CAGE_peak_7_at_Celf2_5end | |||
|id=chr2:6793581..6793625,- | |||
|ontology_enrichment_celltype=CL:0000221!1.64e-12!44;CL:0000133!1.64e-12!44;CL:0002319!4.26e-12!43;CL:0000540!9.36e-12!33;CL:0000047!9.36e-12!33;CL:0000031!9.36e-12!33;CL:0000404!9.36e-12!33;CL:0000055!9.93e-09!50;CL:0000393!5.44e-08!39;CL:0000211!5.44e-08!39;CL:0000117!4.23e-07!23;CL:0000337!4.23e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.88e-13,44;CL:0000133,3.88e-13,44;CL:0002319,1.06e-12,43;CL:0000540,3.45e-12,33;CL:0000047,3.45e-12,33;CL:0000031,3.45e-12,33;CL:0000404,3.45e-12,33;CL:0000393,2.58e-08,39;CL:0000211,2.58e-08,39;CL:0000117,2.45e-07,23;CL:0000337,2.45e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.76e-26!102;UBERON:0000924!1.76e-26!102;UBERON:0006601!1.76e-26!102;UBERON:0001017!7.28e-26!73;UBERON:0005743!7.28e-26!73;UBERON:0000073!2.14e-25!75;UBERON:0001016!2.14e-25!75;UBERON:0000033!3.24e-25!63;UBERON:0003056!1.57e-21!49;UBERON:0000955!1.61e-20!50;UBERON:0006238!1.61e-20!50;UBERON:0002616!7.82e-20!49;UBERON:0002346!1.04e-19!71;UBERON:0003075!1.04e-19!71;UBERON:0007284!1.04e-19!71;UBERON:0001049!7.74e-18!52;UBERON:0005068!7.74e-18!52;UBERON:0006241!7.74e-18!52;UBERON:0007135!7.74e-18!52;UBERON:0003080!1.30e-17!40;UBERON:0002780!3.80e-17!39;UBERON:0001890!3.80e-17!39;UBERON:0006240!3.80e-17!39;UBERON:0002791!1.01e-15!29;UBERON:0003528!1.01e-15!29;UBERON:0001893!1.01e-15!29;UBERON:0002020!1.38e-14!34;UBERON:0007811!2.32e-14!86;UBERON:0000153!1.36e-13!94;UBERON:0000956!3.31e-13!21;UBERON:0001869!3.31e-13!21;UBERON:0000203!3.31e-13!21;UBERON:0000468!5.41e-11!333;UBERON:0002619!1.61e-10!17;UBERON:0000922!2.79e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.45e-31,95;UBERON:0000924,1.45e-31,95;UBERON:0006601,1.45e-31,95;UBERON:0001017,4.30e-27,73;UBERON:0001016,1.34e-26,75;UBERON:0010371,1.78e-25,73;UBERON:0002346,6.63e-25,64;UBERON:0003075,6.63e-25,64;UBERON:0007284,6.63e-25,64;UBERON:0003056,2.21e-22,49;UBERON:0000955,3.92e-20,47;UBERON:0006238,3.92e-20,47;UBERON:0000073,4.74e-20,54;UBERON:0002616,2.00e-19,46;UBERON:0001049,1.04e-18,52;UBERON:0005068,1.04e-18,52;UBERON:0006241,1.04e-18,52;UBERON:0007135,1.04e-18,52;UBERON:0003080,2.70e-18,40;UBERON:0002780,8.25e-18,39;UBERON:0001890,8.25e-18,39;UBERON:0006240,8.25e-18,39;UBERON:0003528,2.52e-16,29;UBERON:0002791,2.52e-16,29;UBERON:0001893,2.52e-16,29;UBERON:0002020,3.86e-15,34;UBERON:0010314,2.61e-14,92;UBERON:0000956,1.06e-13,21;UBERON:0001869,1.06e-13,21;UBERON:0000203,1.06e-13,21;UBERON:0002619,6.70e-11,17;UBERON:0002021,9.24e-07,10;UBERON:0000411,9.24e-07,10;UBERON:0001950,9.24e-07,10 | |||
|phase1_expression=4.48416771893423,0,0,0,0,0,0.233612640595526,0,0.422366166455,0.468129052643987,0.34243593645101,0.398860794976682,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,1.01376931219515,0,0,15.4797861030117,6.59058548203415,12.2490836416799,4.19959264876088,4.31257693094915,0,0,0,0,0.286533439938757,1.03134418455488,3.64169629547276,3.1739458756322,3.1691570175309,0,1.77858959222228,0,0,0,1.79760066311043,3.84218305321555,32.558538264862,28.8912708029818,31.1280942800045,2.28520787523043,1.10434270475807,19.4760370751777,19.1690942036473,10.1114066527102,6.60695285996332,8.42736431362239,5.37622866396852,8.30883612700221,4.02545631850602,5.2091337055676,4.74611098302348,4.50210088025344,7.02871939773326,2.94628585473668,3.55929201997757,2.98239113320481,2.12033341332915,1.66257432234928,0.289864488701678,2.58127163094416,0.679971333707751,1.07940638327563,0.649776417447669,2.68816132258401,2.94933282276679,0,0,0,6.76048414928066,0,0,0,1.73192832808971,2.28023878927589,1.01104889002957,1.82694207550496,0.776813650941515,0.148442139064825,1.21439728736295,0.608930956624282,0.461230994512117,0.301445281105245,1.41106448562846,1.50799909595611,1.23597483867187,15.7613299042704,0,4.04417124868523,4.19598885074748,1.93950101254089,1.86391761218122,12.8823550685081,9.21565509979202,0.255457055208591,0,0,0,7.04016005202667,10.0650132620098,8.29318723944905,10.4294592115366,14.3200656104985,4.98691306942944,10.058958310201,3.05518091550949,2.11491850037158,1.51633655060205,5.05060454127538,3.12289063110489,4.36813998423599,5.94205028357652,8.28876498096433,13.4712268319629,13.4519406299092,13.5867500611607,12.6764651662118,1.07783996466421,2.26927296201383,2.99116911078713,1.7535658594206,2.22437799380478,3.1342694986995,1.4404749548556,0.796137067273973,0,0,0.284163499395593,1.65700618028402,2.11073453982987,1.62055855314913,1.65721314909647,0.787056926989615,1.69693824176116,1.16266972375204,1.60964040839772,1.28441876603886,0.987359099480883,0.820837320395476,0.891756905004413,1.16959989940266,1.3173006917463,1.47627060636409,9.46304768538573,15.1269780197548,0,0.528901133327089,1.70630600428187,3.48355007790658,2.96395161040815,2.8235693447268,3.11329261382818,1.52180500890047,0.474529061544512,0.988193728344065,1.00534083520108,0.596869416123452,0.58489226135736,0,0,0.199141273254367,0.379335801906163,1.48523066392647,0,0.407302655690628,0.581857461502877,0.701358198903186,0.69560190836683,0,0.470996183524124,0.616985819609003,3.85388415213294,0.333690211432188,0.589676985339609,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,1.4473305640901,3.32555742299888,1.51593129416388,2.28150967018836,2.20668611507745,0.938760993154008,4.02015017860358,3.80869825417622,8.97614780145875,3.78324345854858,3.5434350343804,3.50800491046472,3.93271955317771,2.76295970985433,4.19482269886384,0,0,2.95058563811422,3.03530420935206,3.37156238974363,4.68846746368813,0.163934945376675,13.1284882146274,12.6203287766503,12.8844785617891,9.69405289797595,6.93009514062401,6.90675889655422,7.92614286208731,10.9298889452221,9.05993159525067,16.602086673754,15.1021018718249,1.70328102249922,2.31485284767432,4.0721739838394,2.96946221350564,1.32745138339963,1.69946445308487,1.51161778482376,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.45413491791002,1.06949213515416,2.84433082142234,2.10837217149998,5.15677716240934,5.10659408630682,4.32146625675145,3.49268446213437,4.71541477069503,4.61084607469911,2.49716344642899,5.43011767986999,2.43571959291679,0.469343416127421,1.90648863777438,1.54369878638473,3.46261131177108,5.32832608096488,2.5934557719107,2.38744688006273,1.47726809770555,0.874442509889552,3.33765543618917,0,1.03193433981611,0.185194527369712,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0.954670618015114,4.27053591334533,3.25311147402958,1.72808545314882,2.09088296014469,1.52853794622324,2.69728692769641,1.73572257023205,1.30877970992015,1.03691978633434,1.86401793926078,0.56369293868419,1.49516546043979,1.98550188548517,2.72231663681667,1.6790777052105,3.37912250981556,3.28600268208111,3.25510962109875,5.45268591013696,2.65742532908607,2.88030006257865,2.21207784439725,2.22997736819181,1.74608627180206,1.81889152168913,2.8644271306797,2.58285761215644,0.841368146639782,2.21534290761866,0.504832249740738,0.914481679859998,0.907435666231565,0.877120926657772,0.673482891482306,1.5193997283604,4.0811469050738,0.221985953374065,0.0897138566094757,0.335769232728157,2.12508553435409,0.93841237725591,1.09890974560359,0.643105137237198,0.501572104035363,11.2950368523413,15.1907328047368,14.8952833494243,9.79563139359019,7.53590771747707,9.82012066606611,6.07520250208625,7.65546045481175,9.5159905886683,9.83744592328458,1.66059756134683,3.59122386060928,3.92687293234509,4.61902762429759,2.72497111416377,3.12533964365024,5.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| |||
|short_description=p7@Celf2 | |||
}} |
Latest revision as of 21:05, 26 September 2015
Short description: | p7@Celf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Celf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1325 |
Association with transcript: | 17bp_to_ENSMUST00000150624_5end |
EntrezGene: | Celf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.88e-13 | 44 |
neurectodermal cell | 3.88e-13 | 44 |
neural cell | 1.06e-12 | 43 |
neuron | 3.45e-12 | 33 |
neuronal stem cell | 3.45e-12 | 33 |
neuroblast | 3.45e-12 | 33 |
electrically signaling cell | 3.45e-12 | 33 |
electrically responsive cell | 2.58e-08 | 39 |
electrically active cell | 2.58e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.45e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.45e-31 | 95 |
ectoderm | 1.45e-31 | 95 |
presumptive ectoderm | 1.45e-31 | 95 |
central nervous system | 4.30e-27 | 73 |
nervous system | 1.34e-26 | 75 |
ecto-epithelium | 1.78e-25 | 73 |
neurectoderm | 6.63e-25 | 64 |
neural plate | 6.63e-25 | 64 |
presumptive neural plate | 6.63e-25 | 64 |
pre-chordal neural plate | 2.21e-22 | 49 |
brain | 3.92e-20 | 47 |
future brain | 3.92e-20 | 47 |
regional part of nervous system | 4.74e-20 | 54 |
regional part of brain | 2.00e-19 | 46 |
neural tube | 1.04e-18 | 52 |
neural rod | 1.04e-18 | 52 |
future spinal cord | 1.04e-18 | 52 |
neural keel | 1.04e-18 | 52 |
anterior neural tube | 2.70e-18 | 40 |
regional part of forebrain | 8.25e-18 | 39 |
forebrain | 8.25e-18 | 39 |
future forebrain | 8.25e-18 | 39 |
brain grey matter | 2.52e-16 | 29 |
regional part of telencephalon | 2.52e-16 | 29 |
telencephalon | 2.52e-16 | 29 |
gray matter | 3.86e-15 | 34 |
structure with developmental contribution from neural crest | 2.61e-14 | 92 |
cerebral cortex | 1.06e-13 | 21 |
cerebral hemisphere | 1.06e-13 | 21 |
pallium | 1.06e-13 | 21 |
regional part of cerebral cortex | 6.70e-11 | 17 |
occipital lobe | 9.24e-07 | 10 |
visual cortex | 9.24e-07 | 10 |
neocortex | 9.24e-07 | 10 |