FFCP PHASE1:Mm9::chr6:17699172..17699265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64213 | |EntrezGene=64213 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q99M96,Q8K4P7 | |UniProt=Q99M96,Q8K4P7 | ||
|association_with_transcript=0bp_to_ENSMUST00000115417,NM_001083315,NM_022332,uc009bab.1,uc009bac.1,uc009bad.1,uc009bae.1,uc009baf.1_5end | |association_with_transcript=0bp_to_ENSMUST00000115417,NM_001083315,NM_022332,uc009bab.1,uc009bac.1,uc009bad.1,uc009bae.1,uc009baf.1_5end | ||
|cluster_id=chr6:17699172..17699265,+ | |||
|description=CAGE_peak_1_at_St7_5end | |description=CAGE_peak_1_at_St7_5end | ||
|id=chr6:17699172..17699265,+ | |id=chr6:17699172..17699265,+ | ||
|ontology_enrichment_celltype=CL:0000540!5.60e-14!33;CL:0000047!5.60e-14!33;CL:0000031!5.60e-14!33;CL:0000404!5.60e-14!33;CL:0000117!2.31e-13!23;CL:0000337!2.31e-13!23;CL:0000393!2.27e-10!39;CL:0000211!2.27e-10!39;CL:0002319!1.06e-09!43;CL:0000221!2.09e-09!44;CL:0000133!2.09e-09!44;CL:0000055!8.26e-07!50 | |ontology_enrichment_celltype=CL:0000540!5.60e-14!33;CL:0000047!5.60e-14!33;CL:0000031!5.60e-14!33;CL:0000404!5.60e-14!33;CL:0000117!2.31e-13!23;CL:0000337!2.31e-13!23;CL:0000393!2.27e-10!39;CL:0000211!2.27e-10!39;CL:0002319!1.06e-09!43;CL:0000221!2.09e-09!44;CL:0000133!2.09e-09!44;CL:0000055!8.26e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.86e-14,33;CL:0000047,2.86e-14,33;CL:0000031,2.86e-14,33;CL:0000404,2.86e-14,33;CL:0000117,1.22e-13,23;CL:0000337,1.22e-13,23;CL:0000393,1.44e-10,39;CL:0000211,1.44e-10,39;CL:0002319,9.68e-10,43;CL:0000221,1.92e-09,44;CL:0000133,1.92e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-23!73;UBERON:0005743!1.29e-23!73;UBERON:0000073!2.92e-22!75;UBERON:0001016!2.92e-22!75;UBERON:0002346!9.83e-22!71;UBERON:0003075!9.83e-22!71;UBERON:0007284!9.83e-22!71;UBERON:0001049!2.26e-19!52;UBERON:0005068!2.26e-19!52;UBERON:0006241!2.26e-19!52;UBERON:0007135!2.26e-19!52;UBERON:0000033!7.28e-19!63;UBERON:0000955!2.45e-18!50;UBERON:0006238!2.45e-18!50;UBERON:0004121!3.32e-18!102;UBERON:0000924!3.32e-18!102;UBERON:0006601!3.32e-18!102;UBERON:0003056!6.03e-18!49;UBERON:0002616!1.07e-17!49;UBERON:0002020!1.38e-17!34;UBERON:0002791!4.71e-15!29;UBERON:0003528!4.71e-15!29;UBERON:0001893!4.71e-15!29;UBERON:0003080!8.93e-15!40;UBERON:0002780!2.83e-14!39;UBERON:0001890!2.83e-14!39;UBERON:0006240!2.83e-14!39;UBERON:0000956!6.14e-11!21;UBERON:0001869!6.14e-11!21;UBERON:0000203!6.14e-11!21;UBERON:0000025!2.11e-09!114;UBERON:0007811!2.51e-09!86;UBERON:0000153!5.84e-09!94;UBERON:0002619!1.05e-08!17;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0004111!1.80e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!1.29e-23!73;UBERON:0005743!1.29e-23!73;UBERON:0000073!2.92e-22!75;UBERON:0001016!2.92e-22!75;UBERON:0002346!9.83e-22!71;UBERON:0003075!9.83e-22!71;UBERON:0007284!9.83e-22!71;UBERON:0001049!2.26e-19!52;UBERON:0005068!2.26e-19!52;UBERON:0006241!2.26e-19!52;UBERON:0007135!2.26e-19!52;UBERON:0000033!7.28e-19!63;UBERON:0000955!2.45e-18!50;UBERON:0006238!2.45e-18!50;UBERON:0004121!3.32e-18!102;UBERON:0000924!3.32e-18!102;UBERON:0006601!3.32e-18!102;UBERON:0003056!6.03e-18!49;UBERON:0002616!1.07e-17!49;UBERON:0002020!1.38e-17!34;UBERON:0002791!4.71e-15!29;UBERON:0003528!4.71e-15!29;UBERON:0001893!4.71e-15!29;UBERON:0003080!8.93e-15!40;UBERON:0002780!2.83e-14!39;UBERON:0001890!2.83e-14!39;UBERON:0006240!2.83e-14!39;UBERON:0000956!6.14e-11!21;UBERON:0001869!6.14e-11!21;UBERON:0000203!6.14e-11!21;UBERON:0000025!2.11e-09!114;UBERON:0007811!2.51e-09!86;UBERON:0000153!5.84e-09!94;UBERON:0002619!1.05e-08!17;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0004111!1.80e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.63e-24,92;UBERON:0001017,4.97e-24,73;UBERON:0002346,5.43e-24,64;UBERON:0003075,5.43e-24,64;UBERON:0007284,5.43e-24,64;UBERON:0001016,1.48e-22,75;UBERON:0000073,1.15e-20,54;UBERON:0001049,1.10e-19,52;UBERON:0005068,1.10e-19,52;UBERON:0006241,1.10e-19,52;UBERON:0007135,1.10e-19,52;UBERON:0004121,1.81e-19,95;UBERON:0000924,1.81e-19,95;UBERON:0006601,1.81e-19,95;UBERON:0010371,1.15e-18,73;UBERON:0003056,3.17e-18,49;UBERON:0002020,7.72e-18,34;UBERON:0000955,3.17e-17,47;UBERON:0006238,3.17e-17,47;UBERON:0002616,1.39e-16,46;UBERON:0003528,3.01e-15,29;UBERON:0002791,3.01e-15,29;UBERON:0001893,3.01e-15,29;UBERON:0003080,5.56e-15,40;UBERON:0002780,1.81e-14,39;UBERON:0001890,1.81e-14,39;UBERON:0006240,1.81e-14,39;UBERON:0000956,4.86e-11,21;UBERON:0001869,4.86e-11,21;UBERON:0000203,4.86e-11,21;UBERON:0000025,6.22e-10,114;UBERON:0002619,9.25e-09,17;UBERON:0002021,5.53e-08,10;UBERON:0000411,5.53e-08,10;UBERON:0001950,5.53e-08,10;UBERON:0004111,5.58e-08,122 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0,1.29123323441576,0.140788722151667,1.17032263160997,0,0.0797721589953364,0.171200729931206,0.0874204024189974,10.9926221399169,18.0202987976945,20.9868563438444,1.26184866143295,0.959801035240171,1.69755860719212,11.1406710097901,8.83689465687879,30.8215751183944,0.159992422793407,0,0,0,0,0,0,0,16.5107975099504,13.5314253268605,31.6963362030877,0,0,0,0.837063261473815,3.1253413780952,1.57057123192139,0,2.04913645487534,0,0,0.709638518536602,0.367093504323363,7.82391344348039,5.45062890951116,1.09843091367236,0.58328969722285,1.95980990275508,2.87505128729943,1.34226084846189,0,0.336093799142464,5.91696702882678,2.29226751951005,3.09403255366465,73.8455082137532,84.6385566835253,73.5244428067168,7.45457970552091,3.55717918444456,0.899899717281399,1.97773272513395,0.7104801149461,2.99600110518405,3.07374644257244,61.0731816496933,48.0621140460819,61.6252136759549,33.421165175245,32.9094126017904,81.7013630763743,64.2164655822184,62.5068774894814,42.9451935897616,36.7739533685341,31.1821262510174,82.0332709681806,52.9713456457952,71.3651317662761,31.2684958881547,46.7092966326294,31.9348337853533,59.2203456802072,55.5249555116501,58.902224880795,0.530083353332288,1.20914496170857,1.15945795480671,0,0,0,0,0,1.26399978118577,0.340860645156116,0,0,2.11265129665021,7.69958864485907,2.54805239706646,7.11066703153331,16.4533191168523,15.2015919285059,12.6381111253696,0.5709193985953,2.84831672011889,4.89859058913922,5.37804512975021,8.8294988710521,2.53677046981664,7.23468674652588,4.35078216402108,0.879666139307728,0.494389935468748,0.722996784599558,5.30766331169925,5.01477234836968,5.30019644304944,8.24287930329878,1.86391761218122,60.0200633873672,47.1255090330274,0,29.3547055039505,9.59844369589452,21.7290088294941,44.0384479850179,47.5800626931372,49.13085167613,65.1841200721037,48.3302214354325,28.0513860155406,39.4246269254651,1.73126918545538,3.85661608891288,0.758168275301024,5.47148825304832,20.8192708740326,36.3245325004887,38.5332957783447,43.4029875366859,38.7808045162569,52.6547390370733,39.0736191414069,23.2833033665114,2.58681591519411,6.05139456537022,6.51019159406611,4.82230611340665,5.83899223373756,5.57203466435466,4.32142486456681,3.78165106955137,16.1509033082044,7.97778512055617,6.53576048609863,24.0265896141182,28.8467053776748,24.128316235776,36.2219445445372,40.7301959717126,28.6936829970524,31.1595485965547,19.047411499373,22.8860071039652,16.1268652915211,26.4309617167343,9.72825714550269,6.28659945928929,14.2707574939183,6.84452735677896,75.0735116373934,53.3045892124693,0,0.793351699990633,5.54549451391608,6.27039014023184,6.44337306610467,4.43703754171354,3.11329261382818,4.37518940058886,0.474529061544512,1.81168850196412,0.502670417600539,0.795825888164603,0.974820435595601,0.898819408654221,1.08069024937347,0,1.70701110857774,3.19895835307241,1.1270773567308,3.05476991767971,1.16371492300575,0.771494018793504,0.632365371242573,0,0.941992367048249,0.123397163921801,0.296452627087149,1.83529616287703,1.96558995113203,0.899448449539415,1.82574109249653,0.72353147925725,2.80088436959562,2.5892652370573,1.29708181420028,1.92192989231657,0,2.60498663367952,0,0,0.358794827043824,0,6.65111484599777,8.7166049414423,10.4297584922897,13.0703716046895,18.7752198630802,26.9685074481323,24.2804513703734,9.36641509717434,26.0097987775215,20.8176808269848,12.756381492599,4.91589944147214,5.00786447411097,6.07526046042349,3.01582567878545,22.3001330365671,0.491764273019036,0,34.1972756673997,27.3103229759833,0.983609672260053,0.252470927204373,16.7219356290616,22.2550084249084,27.5741949097983,10.0366895140072,14.4819138153556,14.1538265394416,13.7635638569464,25.1340037803728,26.4842811224171,68.4414403978449,0.851640511249612,0.712262414669021,1.46598263418218,1.81467135269789,0,2.18502572539483,0.604647113929502,1.13163047853539,1.47650946440386,1.53717573971964,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,13.9580238359053,13.1444598642856,5.82114077022395,4.92975180572662,5.67488747655275,6.42127743367454,5.92376474167636,4.87143918583359,0.469343416127421,0.63549621259146,0.661585194164886,0.16488625294148,2.26050197374268,0.904693873922338,2.02932984805332,2.62625439592098,1.1659233465194,33.5619796639022,11.7900907750518,1.23832120777933,1.85194527369712,12.4323181623096,14.8996708215917,10.5237959675,65.2717171176404,38.3466979366823,39.9397924294785,0,6.80122386199441,6.30290348093231,4.21220829205025,2.50905955217362,2.18362563746178,0.809186078308924,0.991841468704031,1.04702376793612,0.259229946583586,0,0,1.49516546043979,2.15096037594227,0.777804753376191,1.29159823477731,0.675824501963113,2.8165737274981,0.5208175393758,0.314578033277133,0,0,1.58005560314089,4.66267995167378,3.49217254360413,1.81889152168913,1.43221356533985,1.19208812868759,0.360586348559907,1.03382669022204,0.807731599585181,0.914481679859998,0.403304740547362,1.16949456887703,0.769694733122636,0.818138315270983,0,0.221985953374065,0.179427713218951,0.83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| ||
|short_description=p1@St7 | |short_description=p1@St7 | ||
}} | }} |
Latest revision as of 23:41, 26 September 2015
Short description: | p1@St7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St7_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000115417, NM_001083315, NM_022332, uc009bab.1, uc009bac.1, uc009bad.1, uc009bae.1, uc009baf.1_5end |
EntrezGene: | St7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.86e-14 | 33 |
neuronal stem cell | 2.86e-14 | 33 |
neuroblast | 2.86e-14 | 33 |
electrically signaling cell | 2.86e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.22e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-13 | 23 |
electrically responsive cell | 1.44e-10 | 39 |
electrically active cell | 1.44e-10 | 39 |
neural cell | 9.68e-10 | 43 |
ectodermal cell | 1.92e-09 | 44 |
neurectodermal cell | 1.92e-09 | 44 |