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FFCP PHASE1:Mm9::chr7:71646573..71646588,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:71646573..71646588,+
|DHSsupport=NA
|short_description=p3@Apba2
|DPIdataset=NA
|description=CAGE_peak_3_at_Apba2_5end
|association_with_transcript=-3bp_to_ENSMUST00000032732,NM_007461,uc009hgj.2_5end
|EntrezGene=11784
|EntrezGene=11784
|HGNC=
|HGNC=
|MCL_coexpression_id=1655
|TSSclassifier=NA
|UniProt=P98084
|UniProt=P98084
|association_with_transcript=-3bp_to_ENSMUST00000032732,NM_007461,uc009hgj.2_5end
|cluster_id=chr7:71646573..71646588,+
|description=CAGE_peak_3_at_Apba2_5end
|id=chr7:71646573..71646588,+
|ontology_enrichment_celltype=CL:0000540!1.39e-16!33;CL:0000047!1.39e-16!33;CL:0000031!1.39e-16!33;CL:0000404!1.39e-16!33;CL:0002319!8.74e-15!43;CL:0000221!5.63e-14!44;CL:0000133!5.63e-14!44;CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000393!3.04e-11!39;CL:0000211!3.04e-11!39;CL:0000055!5.83e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.27e-20,33;CL:0000047,1.27e-20,33;CL:0000031,1.27e-20,33;CL:0000404,1.27e-20,33;CL:0002319,8.29e-18,43;CL:0000221,4.52e-17,44;CL:0000133,4.52e-17,44;CL:0000117,6.26e-17,23;CL:0000337,6.26e-17,23;CL:0000393,2.08e-15,39;CL:0000211,2.08e-15,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.48e-32!75;UBERON:0001016!2.48e-32!75;UBERON:0001017!3.13e-32!73;UBERON:0005743!3.13e-32!73;UBERON:0004121!1.90e-30!102;UBERON:0000924!1.90e-30!102;UBERON:0006601!1.90e-30!102;UBERON:0002346!3.72e-28!71;UBERON:0003075!3.72e-28!71;UBERON:0007284!3.72e-28!71;UBERON:0000033!8.51e-24!63;UBERON:0003056!2.79e-23!49;UBERON:0001049!6.41e-23!52;UBERON:0005068!6.41e-23!52;UBERON:0006241!6.41e-23!52;UBERON:0007135!6.41e-23!52;UBERON:0000955!4.33e-21!50;UBERON:0006238!4.33e-21!50;UBERON:0002616!1.07e-20!49;UBERON:0003080!5.27e-18!40;UBERON:0002020!9.76e-18!34;UBERON:0002780!1.14e-17!39;UBERON:0001890!1.14e-17!39;UBERON:0006240!1.14e-17!39;UBERON:0007811!5.86e-17!86;UBERON:0000153!1.46e-16!94;UBERON:0002791!8.41e-15!29;UBERON:0003528!8.41e-15!29;UBERON:0001893!8.41e-15!29;UBERON:0000956!1.08e-10!21;UBERON:0001869!1.08e-10!21;UBERON:0000203!1.08e-10!21;UBERON:0002619!1.52e-08!17;UBERON:0002021!3.93e-08!10;UBERON:0000411!3.93e-08!10;UBERON:0001950!3.93e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.93e-40,73;UBERON:0001016,3.34e-39,75;UBERON:0004121,5.92e-38,95;UBERON:0000924,5.92e-38,95;UBERON:0006601,5.92e-38,95;UBERON:0002346,1.62e-36,64;UBERON:0003075,1.62e-36,64;UBERON:0007284,1.62e-36,64;UBERON:0010371,6.85e-30,73;UBERON:0000073,2.39e-29,54;UBERON:0003056,5.20e-29,49;UBERON:0001049,3.28e-28,52;UBERON:0005068,3.28e-28,52;UBERON:0006241,3.28e-28,52;UBERON:0007135,3.28e-28,52;UBERON:0000955,3.90e-24,47;UBERON:0006238,3.90e-24,47;UBERON:0002616,1.20e-23,46;UBERON:0002020,8.68e-23,34;UBERON:0003080,2.61e-22,40;UBERON:0002780,6.95e-22,39;UBERON:0001890,6.95e-22,39;UBERON:0006240,6.95e-22,39;UBERON:0010314,8.62e-22,92;UBERON:0003528,4.84e-19,29;UBERON:0002791,4.84e-19,29;UBERON:0001893,4.84e-19,29;UBERON:0000956,8.26e-14,21;UBERON:0001869,8.26e-14,21;UBERON:0000203,8.26e-14,21;UBERON:0002619,4.56e-11,17;UBERON:0002021,6.71e-10,10;UBERON:0000411,6.71e-10,10;UBERON:0001950,6.71e-10,10;UBERON:0000970,2.21e-07,9;UBERON:0000019,2.21e-07,9;UBERON:0000047,2.21e-07,9;UBERON:0010312,2.21e-07,9;UBERON:0004088,2.21e-07,9;UBERON:0002104,2.21e-07,9;UBERON:0001456,2.21e-07,9;UBERON:0003072,2.21e-07,9;UBERON:0004128,2.21e-07,9;UBERON:0003071,2.21e-07,9
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.68822784320151,1.14846392823004,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,1.25987779462826,2.87505128729943,0,0,0,0,0,0,15.9830004079082,13.7537654610729,9.50747105259269,0,0,0,0,0,3.59520132622086,5.76327457982332,6.947204024668,8.10035629990144,7.78202357000113,9.71213346972932,8.61387309711293,9.30930074033651,10.4471563409878,8.27296907949019,4.40463523997555,5.61824287574826,4.14737639791857,25.0583946687368,19.212405156506,16.6692278578163,5.862842979029,3.37657566019008,7.48711414106369,9.1334861496837,8.39992916714707,12.3023634244698,1.06016670666458,0.982430281388212,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,2.25530924795977,1.82679286987285,1.38369298353635,0.753613202763113,1.17588707135705,0,0.247194967734374,0,0,0.323533699894818,0,0,0,20.2018749937968,19.8974371472782,0,0,0,0,2.99581278809645,2.28750301409313,6.78533501409468,17.0347833788431,17.9000820131231,5.61027720310812,7.62533936418461,0.203678727700633,0.373220911830279,0,1.05220927943237,5.85541993332167,13.3343220571414,9.54329287968351,13.7141384230501,23.8127747029647,25.7508577772548,25.1120621820073,4.65666067330228,0.862271971731369,1.51284864134255,1.58356011747554,0.876782929710299,1.11218899690239,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.268412837520744,11.565947171027,10.9078889122042,0,0,1.2797295032114,1.16118335930219,0.902072229254653,0.80673409849337,2.44615848229357,0.951128130562796,0.474529061544512,0.988193728344065,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.379335801906163,1.25673363870702,0,0,0.387904974335251,0.280543279561274,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,5.61927064957272,8.20481806145422,0,0,1.57754109708128,3.90438744296638,2.58508077279359,5.73525115086125,6.68396022247182,6.79383673893198,2.02405350837447,2.92255857911312,2.76701444562566,3.21321316421807,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0.680879211507576,2.52085531643834,2.19909762430683,3.21505552547388,3.19212420556092,6.95638388648075,2.63278432963394,1.522324745573,0,0,0,0,0,0.482503399425247,0.119372344003136,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0.954670618015114,2.05618395827738,1.82987520414164,0.86404272657441,0.627264888043406,0.87345025498471,0.809186078308924,0.743881101528023,0.785267825952089,0.388844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0,0,0,1.26404448251271,3.04087822935246,1.33524244314275,0.389762468933385,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.605798699688886,0.15241361331,0.302478555410522,1.16949456887703,0.769694733122636,0.935015217452552,0,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,0,23.1548255472997,12.4287813856938,16.6139698897425,21.6535009753046,13.7016503954128,18.8848474347425,17.550585006027,18.0128481289688,16.3131267234314,19.6748918465692,3.84013186061454,3.19219898720825,3.58540572083682,4.61902762429759,2.72497111416377,1.47074806760011,2.00022055021454,1.44224540067226,1.60459604795908,1.76888048234658,3.04175159868288,2.64076877940507,1.49826411951812,1.79270426733634,2.64203157195821,2.38146845641537,2.31768651889711,2.31491064556446,1.64834360321323,1.76638704161277,2.40008476669791,3.01708870470874,1.43061713968393,3.34296758254356,2.91739079287525,2.62305284464197,2.0122077016005,1.57841826862706,2.03706170768793,0,2.13543032623513,3.74317033027141,1.22769312950907,0.929621047115796,1.54325288784913,5.74564329257276,1.87145286756327,3.43793686477277,0.382576664137687,0.882365676478062,1.62307484934295
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0.68822784320151,1.14846392823004,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,1.25987779462826,2.87505128729943,0,0,0,0,0,0,15.9830004079082,13.7537654610729,9.50747105259269,0,0,0,0,0,3.59520132622086,5.76327457982332,6.947204024668,8.10035629990144,7.78202357000113,9.71213346972932,8.61387309711293,9.30930074033651,10.4471563409878,8.27296907949019,4.40463523997555,5.61824287574826,4.14737639791857,25.0583946687368,19.212405156506,16.6692278578163,5.862842979029,3.37657566019008,7.48711414106369,9.1334861496837,8.39992916714707,12.3023634244698,1.06016670666458,0.982430281388212,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,2.25530924795977,1.82679286987285,1.38369298353635,0.753613202763113,1.17588707135705,0,0.247194967734374,0,0,0.323533699894818,0,0,0,20.2018749937968,19.8974371472782,0,0,0,0,2.99581278809645,2.28750301409313,6.78533501409468,17.0347833788431,17.9000820131231,5.61027720310812,7.62533936418461,0.203678727700633,0.373220911830279,0,1.05220927943237,5.85541993332167,13.3343220571414,9.54329287968351,13.7141384230501,23.8127747029647,25.7508577772548,25.1120621820073,4.65666067330228,0.862271971731369,1.51284864134255,1.58356011747554,0.876782929710299,1.11218899690239,0,0.61734640922383,0.59710280045548,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.268412837520744,11.565947171027,10.9078889122042,0,0,1.2797295032114,1.16118335930219,0.902072229254653,0.80673409849337,2.44615848229357,0.951128130562796,0.474529061544512,0.988193728344065,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0.398282546508734,0.379335801906163,1.25673363870702,0,0,0.387904974335251,0.280543279561274,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0,0,0.144649058581512,0,0,0,0.275936746304732,5.61927064957272,8.20481806145422,0,0,1.57754109708128,3.90438744296638,2.58508077279359,5.73525115086125,6.68396022247182,6.79383673893198,2.02405350837447,2.92255857911312,2.76701444562566,3.21321316421807,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0,0,0,0.680879211507576,2.52085531643834,2.19909762430683,3.21505552547388,3.19212420556092,6.95638388648075,2.63278432963394,1.522324745573,0,0,0,0,0,0.482503399425247,0.119372344003136,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0.954670618015114,2.05618395827738,1.82987520414164,0.86404272657441,0.627264888043406,0.87345025498471,0.809186078308924,0.743881101528023,0.785267825952089,0.388844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0,0,0,1.26404448251271,3.04087822935246,1.33524244314275,0.389762468933385,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,0.605798699688886,0.15241361331,0.302478555410522,1.16949456887703,0.769694733122636,0.935015217452552,0,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,0,23.1548255472997,12.4287813856938,16.6139698897425,21.6535009753046,13.7016503954128,18.8848474347425,17.550585006027,18.0128481289688,16.3131267234314,19.6748918465692,3.84013186061454,3.19219898720825,3.58540572083682,4.61902762429759,2.72497111416377,1.47074806760011,2.00022055021454,1.44224540067226,1.60459604795908,1.76888048234658,3.04175159868288,2.64076877940507,1.49826411951812,1.79270426733634,2.64203157195821,2.38146845641537,2.31768651889711,2.31491064556446,1.64834360321323,1.76638704161277,2.40008476669791,3.01708870470874,1.43061713968393,3.34296758254356,2.91739079287525,2.62305284464197,2.0122077016005,1.57841826862706,2.03706170768793,0,2.13543032623513,3.74317033027141,1.22769312950907,0.929621047115796,1.54325288784913,5.74564329257276,1.87145286756327,3.43793686477277,0.382576664137687,0.882365676478062,1.62307484934295
|short_description=p3@Apba2
}}
}}

Latest revision as of 00:40, 27 September 2015

Short description:p3@Apba2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Apba2_5end
Coexpression cluster:MCL_coexpression_mm9:1655
Association with transcript: -3bp_to_ENSMUST00000032732, NM_007461, uc009hgj.2_5end
EntrezGene:Apba2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Apba2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D517.03
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C623.81
eyeball, neonate N01.CNhs11140.1532-43E725.75
eyeball, neonate N02.CNhs11205.1551-44G825.11
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.27e-2033
neuronal stem cell1.27e-2033
neuroblast1.27e-2033
electrically signaling cell1.27e-2033
neural cell8.29e-1843
ectodermal cell4.52e-1744
neurectodermal cell4.52e-1744
CNS neuron (sensu Vertebrata)6.26e-1723
neuroblast (sensu Vertebrata)6.26e-1723
electrically responsive cell2.08e-1539
electrically active cell2.08e-1539

Uber anatomy
Ontology termp-valuen
central nervous system4.93e-4073
nervous system3.34e-3975
ectoderm-derived structure5.92e-3895
ectoderm5.92e-3895
presumptive ectoderm5.92e-3895
neurectoderm1.62e-3664
neural plate1.62e-3664
presumptive neural plate1.62e-3664
ecto-epithelium6.85e-3073
regional part of nervous system2.39e-2954
pre-chordal neural plate5.20e-2949
neural tube3.28e-2852
neural rod3.28e-2852
future spinal cord3.28e-2852
neural keel3.28e-2852
brain3.90e-2447
future brain3.90e-2447
regional part of brain1.20e-2346
gray matter8.68e-2334
anterior neural tube2.61e-2240
regional part of forebrain6.95e-2239
forebrain6.95e-2239
future forebrain6.95e-2239
structure with developmental contribution from neural crest8.62e-2292
brain grey matter4.84e-1929
regional part of telencephalon4.84e-1929
telencephalon4.84e-1929
cerebral cortex8.26e-1421
cerebral hemisphere8.26e-1421
pallium8.26e-1421
regional part of cerebral cortex4.56e-1117
occipital lobe6.71e-1010
visual cortex6.71e-1010
neocortex6.71e-1010
eye2.21e-079
camera-type eye2.21e-079
simple eye2.21e-079
immature eye2.21e-079
ocular region2.21e-079
visual system2.21e-079
face2.21e-079
optic cup2.21e-079
optic vesicle2.21e-079
eye primordium2.21e-079
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