FFCP PHASE1:Mm9::chr6:36760161..36760187,-: Difference between revisions
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{{FFCP|EntrezGene=19242|HGNC=|MCL_coexpression_id=471|UniProt=Q3UZI5|association_with_transcript=-1bp_to_ENSMUST00000166530_5end|description=CAGE_peak_1_at_Ptn_5end|id=chr6:36760161..36760187,-|ontology_enrichment_celltype=CL:0000540!1.50e-16!33;CL:0000047!1.50e-16!33;CL:0000031!1.50e-16!33;CL:0000404!1.50e-16!33;CL:0000117!6.45e-14!23;CL:0000337!6.45e-14!23;CL:0000221!2.52e-13!44;CL:0000133!2.52e-13!44;CL:0002319!6.32e-13!43;CL:0000393!5.91e-12!39;CL:0000211!5.91e-12!39;CL:0000055!5.36e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,9.19e-17,33;CL:0000047,9.19e-17,33;CL:0000031,9.19e-17,33;CL:0000404,9.19e-17,33;CL:0000117,4.31e-14,23;CL:0000337,4.31e-14,23;CL:0000221,4.08e-13,44;CL:0000133,4.08e-13,44;CL:0002319,1.03e-12,43;CL:0000393,7.98e-12,39;CL:0000211,7.98e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.49e-27!73;UBERON:0005743!6.49e-27!73;UBERON:0000073!1.10e-25!75;UBERON:0001016!1.10e-25!75;UBERON:0004121!2.27e-22!102;UBERON:0000924!2.27e-22!102;UBERON:0006601!2.27e-22!102;UBERON:0001049!4.44e-19!52;UBERON:0005068!4.44e-19!52;UBERON:0006241!4.44e-19!52;UBERON:0007135!4.44e-19!52;UBERON:0002346!1.72e-18!71;UBERON:0003075!1.72e-18!71;UBERON:0007284!1.72e-18!71;UBERON:0002020!9.17e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!1.91e-17!50;UBERON:0006238!1.91e-17!50;UBERON:0002616!8.20e-17!49;UBERON:0003080!1.33e-15!40;UBERON:0003056!2.10e-15!49;UBERON:0002780!3.27e-15!39;UBERON:0001890!3.27e-15!39;UBERON:0006240!3.27e-15!39;UBERON:0002791!2.58e-14!29;UBERON:0003528!2.58e-14!29;UBERON:0001893!2.58e-14!29;UBERON:0000468!1.05e-10!333;UBERON:0000956!2.95e-10!21;UBERON:0001869!2.95e-10!21;UBERON:0000203!2.95e-10!21;UBERON:0000153!4.75e-10!94;UBERON:0007811!1.81e-08!86;UBERON:0000922!2.95e-08!328;UBERON:0002619!3.98e-08!17;UBERON:0002021!4.05e-07!10;UBERON:0000411!4.05e-07!10;UBERON:0001950!4.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-27,73;UBERON:0001016,1.35e-25,75;UBERON:0004121,7.94e-23,95;UBERON:0000924,7.94e-23,95;UBERON:0006601,7.94e-23,95;UBERON:0000073,2.99e-20,54;UBERON:0002346,1.88e-19,64;UBERON:0003075,1.88e-19,64;UBERON:0007284,1.88e-19,64;UBERON:0001049,4.40e-19,52;UBERON:0005068,4.40e-19,52;UBERON:0006241,4.40e-19,52;UBERON:0007135,4.40e-19,52;UBERON:0010371,2.32e-18,73;UBERON:0002020,5.39e-18,34;UBERON:0010314,5.92e-17,92;UBERON:0000955,3.73e-16,47;UBERON:0006238,3.73e-16,47;UBERON:0003080,8.40e-16,40;UBERON:0003056,1.33e-15,49;UBERON:0002616,1.59e-15,46;UBERON:0002780,2.09e-15,39;UBERON:0001890,2.09e-15,39;UBERON:0006240,2.09e-15,39;UBERON:0003528,1.70e-14,29;UBERON:0002791,1.70e-14,29;UBERON:0001893,1.70e-14,29;UBERON:0000956,2.22e-10,21;UBERON:0001869,2.22e-10,21;UBERON:0000203,2.22e-10,21;UBERON:0002619,3.21e-08,17;UBERON:0002021,3.37e-07,10;UBERON:0000411,3.37e-07,10;UBERON:0001950,3.37e-07,10;UBERON:0000922,5.07e-07,320|phase1_expression=608.725767845322,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9236147400629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.506884656097573,0,0.782391344348039,7.41285531693518,3.07560655828261,1.36100929351998,31.0769856008305,57.5010257459886,0,0,0,0.257259436035947,10.601737277734,7.73508138416164,159.830004079082,174.038032180499,133.738426139804,3.38844532069132,1.77858959222228,0,0,0,33.2556122675429,40.3429220587632,121.316846400919,135.005938331691,131.873750767317,220.522559959736,261.950089568614,114.528897265982,121.915439135197,97.4371913806622,59.4625757396699,78.7830875985608,75.8816274285843,239.241725942572,322.219480767687,248.996591126131,76.216958727377,53.4624479530096,74.4127466673065,249.84504048167,245.875892740051,212.122569349192,0.530083353332288,4.91215140694106,0.289864488701678,0,0.679971333707751,1.61910957491345,0,0,5.47733238513832,0.681721290312231,1.81850203222008,0.35333957451034,67.1823112334766,1.28326477414318,0,0,0.649473123033642,0,0,2.74041311325744,2.84831672011889,12.3206975423805,39.7281398294451,16.4411358288556,15.4512383161559,16.7302131013411,18.6966044345771,12.5666591329675,3.21353458054686,1.3013942122792,0.884610551949874,22.9708926925321,8.83366073841574,8.727754556434,0,47.1377083188591,42.0987880695045,0.766371165625774,0,0,0,63.6610217470497,69.9975922312499,153.298309577695,83.0880250519081,95.6375810415436,90.1800113388491,97.3447578406546,86.7671380004695,4.60305791257344,0.758168275301024,9.89076722666428,32.7903516266013,32.6460988295532,37.632985129318,36.470565916243,39.8013520035268,45.3522569808368,49.755615741216,33.372734825333,40.7423506643072,82.0720387928336,68.2690361756122,77.8144850117891,66.1752453156923,49.8000598126698,38.2754773718775,55.3315261755411,0,0,0,47.2246761380944,54.4100459156143,49.6971289632401,49.4796497373089,30.3016916891002,33.7844977223358,22.78832658554,16.3646774853768,12.9609530027558,12.1774288935976,9.02921052435024,3.97237166774693,2.77779976108131,3.29325172936576,1.20785776884335,76.3352513287782,139.1270359367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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19242 | |||
|HGNC= | |||
|MCL_coexpression_id=471 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZI5 | |||
|association_with_transcript=-1bp_to_ENSMUST00000166530_5end | |||
|cluster_id=chr6:36760161..36760187,- | |||
|description=CAGE_peak_1_at_Ptn_5end | |||
|id=chr6:36760161..36760187,- | |||
|ontology_enrichment_celltype=CL:0000540!1.50e-16!33;CL:0000047!1.50e-16!33;CL:0000031!1.50e-16!33;CL:0000404!1.50e-16!33;CL:0000117!6.45e-14!23;CL:0000337!6.45e-14!23;CL:0000221!2.52e-13!44;CL:0000133!2.52e-13!44;CL:0002319!6.32e-13!43;CL:0000393!5.91e-12!39;CL:0000211!5.91e-12!39;CL:0000055!5.36e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.19e-17,33;CL:0000047,9.19e-17,33;CL:0000031,9.19e-17,33;CL:0000404,9.19e-17,33;CL:0000117,4.31e-14,23;CL:0000337,4.31e-14,23;CL:0000221,4.08e-13,44;CL:0000133,4.08e-13,44;CL:0002319,1.03e-12,43;CL:0000393,7.98e-12,39;CL:0000211,7.98e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.49e-27!73;UBERON:0005743!6.49e-27!73;UBERON:0000073!1.10e-25!75;UBERON:0001016!1.10e-25!75;UBERON:0004121!2.27e-22!102;UBERON:0000924!2.27e-22!102;UBERON:0006601!2.27e-22!102;UBERON:0001049!4.44e-19!52;UBERON:0005068!4.44e-19!52;UBERON:0006241!4.44e-19!52;UBERON:0007135!4.44e-19!52;UBERON:0002346!1.72e-18!71;UBERON:0003075!1.72e-18!71;UBERON:0007284!1.72e-18!71;UBERON:0002020!9.17e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!1.91e-17!50;UBERON:0006238!1.91e-17!50;UBERON:0002616!8.20e-17!49;UBERON:0003080!1.33e-15!40;UBERON:0003056!2.10e-15!49;UBERON:0002780!3.27e-15!39;UBERON:0001890!3.27e-15!39;UBERON:0006240!3.27e-15!39;UBERON:0002791!2.58e-14!29;UBERON:0003528!2.58e-14!29;UBERON:0001893!2.58e-14!29;UBERON:0000468!1.05e-10!333;UBERON:0000956!2.95e-10!21;UBERON:0001869!2.95e-10!21;UBERON:0000203!2.95e-10!21;UBERON:0000153!4.75e-10!94;UBERON:0007811!1.81e-08!86;UBERON:0000922!2.95e-08!328;UBERON:0002619!3.98e-08!17;UBERON:0002021!4.05e-07!10;UBERON:0000411!4.05e-07!10;UBERON:0001950!4.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-27,73;UBERON:0001016,1.35e-25,75;UBERON:0004121,7.94e-23,95;UBERON:0000924,7.94e-23,95;UBERON:0006601,7.94e-23,95;UBERON:0000073,2.99e-20,54;UBERON:0002346,1.88e-19,64;UBERON:0003075,1.88e-19,64;UBERON:0007284,1.88e-19,64;UBERON:0001049,4.40e-19,52;UBERON:0005068,4.40e-19,52;UBERON:0006241,4.40e-19,52;UBERON:0007135,4.40e-19,52;UBERON:0010371,2.32e-18,73;UBERON:0002020,5.39e-18,34;UBERON:0010314,5.92e-17,92;UBERON:0000955,3.73e-16,47;UBERON:0006238,3.73e-16,47;UBERON:0003080,8.40e-16,40;UBERON:0003056,1.33e-15,49;UBERON:0002616,1.59e-15,46;UBERON:0002780,2.09e-15,39;UBERON:0001890,2.09e-15,39;UBERON:0006240,2.09e-15,39;UBERON:0003528,1.70e-14,29;UBERON:0002791,1.70e-14,29;UBERON:0001893,1.70e-14,29;UBERON:0000956,2.22e-10,21;UBERON:0001869,2.22e-10,21;UBERON:0000203,2.22e-10,21;UBERON:0002619,3.21e-08,17;UBERON:0002021,3.37e-07,10;UBERON:0000411,3.37e-07,10;UBERON:0001950,3.37e-07,10;UBERON:0000922,5.07e-07,320 | |||
|phase1_expression=608.725767845322,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9236147400629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.506884656097573,0,0.782391344348039,7.41285531693518,3.07560655828261,1.36100929351998,31.0769856008305,57.5010257459886,0,0,0,0.257259436035947,10.601737277734,7.73508138416164,159.830004079082,174.038032180499,133.738426139804,3.38844532069132,1.77858959222228,0,0,0,33.2556122675429,40.3429220587632,121.316846400919,135.005938331691,131.873750767317,220.522559959736,261.950089568614,114.528897265982,121.915439135197,97.4371913806622,59.4625757396699,78.7830875985608,75.8816274285843,239.241725942572,322.219480767687,248.996591126131,76.216958727377,53.4624479530096,74.4127466673065,249.84504048167,245.875892740051,212.122569349192,0.530083353332288,4.91215140694106,0.289864488701678,0,0.679971333707751,1.61910957491345,0,0,5.47733238513832,0.681721290312231,1.81850203222008,0.35333957451034,67.1823112334766,1.28326477414318,0,0,0.649473123033642,0,0,2.74041311325744,2.84831672011889,12.3206975423805,39.7281398294451,16.4411358288556,15.4512383161559,16.7302131013411,18.6966044345771,12.5666591329675,3.21353458054686,1.3013942122792,0.884610551949874,22.9708926925321,8.83366073841574,8.727754556434,0,47.1377083188591,42.0987880695045,0.766371165625774,0,0,0,63.6610217470497,69.9975922312499,153.298309577695,83.0880250519081,95.6375810415436,90.1800113388491,97.3447578406546,86.7671380004695,4.60305791257344,0.758168275301024,9.89076722666428,32.7903516266013,32.6460988295532,37.632985129318,36.470565916243,39.8013520035268,45.3522569808368,49.755615741216,33.372734825333,40.7423506643072,82.0720387928336,68.2690361756122,77.8144850117891,66.1752453156923,49.8000598126698,38.2754773718775,55.3315261755411,0,0,0,47.2246761380944,54.4100459156143,49.6971289632401,49.4796497373089,30.3016916891002,33.7844977223358,22.78832658554,16.3646774853768,12.9609530027558,12.1774288935976,9.02921052435024,3.97237166774693,2.77779976108131,3.29325172936576,1.20785776884335,76.3352513287782,139.127035936793,0.330418782983798,0.793351699990633,60.147286650936,56.4335112620866,39.6911780872047,24.6053900040478,17.5678654637448,12.1744400712038,2.37264530772256,8.07024878147653,9.29940272560997,12.5342577385925,7.01870713628832,3.59527763461689,2.16138049874694,1.7922714592893,33.5712184686955,38.8444942873078,43.9560169125014,40.3229629133722,44.6090720485539,35.2783174048302,11.3825766823663,1.62371162777562,1.56998727841375,0.493588655687202,0,21.1893284259439,15.3316016188298,2.69834534861824,3.04290182082754,1.68824011826692,1.78238096246994,1.15078454980324,0.810676133875177,0.549122826376163,2.87536413054709,0.744281895337007,2.18426371180192,0.252578877947112,0.358794827043824,0,0.369506380333209,98.914516944193,24.1188165134198,16.6350184059684,9.15291968325158,6.19773152534718,6.18913466303636,2.34160377429359,1.89162172927429,1.32878813789265,2.71073106717728,0.81931657357869,0.863424909329478,0.289298117163023,0,0,1.47529281905711,1.65562047782839,64.5413371750924,88.0259766307446,220.328566586252,2.52470927204373,41.3315767435296,46.8526493155966,43.5155263420254,65.7164194369518,62.160830068988,60.5783775888101,75.2947905115303,52.3137985661248,60.4790300258181,166.765763222918,2.41298144854057,87.6082770042896,89.4249406851133,17.9817434040064,1.32745138339963,97.3550350981476,75.8832127981525,50.9233715340925,37.5033403958581,50.4193642628041,31.0113951801865,31.2639007350655,31.0152719194708,6.32073515871632,2.10837217149998,3.09406629744561,40.5123130847008,28.8097750450096,22.5084109781993,27.2208034490122,39.1921916349425,55.2943334566419,62.3640788082038,31.6643547079183,4.22409074514679,0.63549621259146,4.19003956304428,7.91454014119104,15.339120536111,15.2591700068234,9.31104283224465,7.71462228801788,4.08073171281791,48.025153220722,0,107.114784472912,47.2246044792765,1.50694765603753,0,0,0,0.279902904647316,0.138199973804424,5.72802370809068,59.1548307996723,50.4232278474585,24.7332230481925,22.5815359695626,17.250642535948,14.1607563704062,12.7286321817017,4.97336289769656,2.85152941241944,1.24267862617385,0,33.9402559519832,30.2789037536489,38.1124329154333,33.5815541042101,30.5810587138308,36.6154584574752,16.0151393358059,3.35549902162275,1.44950472495604,1.15212002503146,0.632022241256357,62.6420915246607,46.8361964671612,17.7991527479579,10.9206284357164,8.34461690081313,3.36547258655913,3.69223817936443,2.92802704849628,1.905170166375,1.20991422164209,0.779663045918019,0.865906574762965,0.467507608726276,1.81384306892169,0,0,0,4.25017106870819,18.3928825942158,8.97442958909599,1.07184189539533,0,253.573577335063,210.36863308378,220.564772674168,163.604229591191,130.850761276193,124.639993069301,116.103870039871,90.9648830512925,86.5502001159831,106.140863909123,40.9960022957498,55.8634822761443,77.1715898008686,53.9696911891613,32.4900402073373,33.4595185379026,50.4500072109667,60.5743068282349,46.533285390813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| |||
|short_description=p1@Ptn | |||
}} |
Latest revision as of 03:02, 27 September 2015
Short description: | p1@Ptn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptn_5end |
Coexpression cluster: | MCL_coexpression_mm9:471 |
Association with transcript: | -1bp_to_ENSMUST00000166530_5end |
EntrezGene: | Ptn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.19e-17 | 33 |
neuronal stem cell | 9.19e-17 | 33 |
neuroblast | 9.19e-17 | 33 |
electrically signaling cell | 9.19e-17 | 33 |
CNS neuron (sensu Vertebrata) | 4.31e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.31e-14 | 23 |
ectodermal cell | 4.08e-13 | 44 |
neurectodermal cell | 4.08e-13 | 44 |
neural cell | 1.03e-12 | 43 |
electrically responsive cell | 7.98e-12 | 39 |
electrically active cell | 7.98e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.11e-27 | 73 |
nervous system | 1.35e-25 | 75 |
ectoderm-derived structure | 7.94e-23 | 95 |
ectoderm | 7.94e-23 | 95 |
presumptive ectoderm | 7.94e-23 | 95 |
regional part of nervous system | 2.99e-20 | 54 |
neurectoderm | 1.88e-19 | 64 |
neural plate | 1.88e-19 | 64 |
presumptive neural plate | 1.88e-19 | 64 |
neural tube | 4.40e-19 | 52 |
neural rod | 4.40e-19 | 52 |
future spinal cord | 4.40e-19 | 52 |
neural keel | 4.40e-19 | 52 |
ecto-epithelium | 2.32e-18 | 73 |
gray matter | 5.39e-18 | 34 |
structure with developmental contribution from neural crest | 5.92e-17 | 92 |
brain | 3.73e-16 | 47 |
future brain | 3.73e-16 | 47 |
anterior neural tube | 8.40e-16 | 40 |
pre-chordal neural plate | 1.33e-15 | 49 |
regional part of brain | 1.59e-15 | 46 |
regional part of forebrain | 2.09e-15 | 39 |
forebrain | 2.09e-15 | 39 |
future forebrain | 2.09e-15 | 39 |
brain grey matter | 1.70e-14 | 29 |
regional part of telencephalon | 1.70e-14 | 29 |
telencephalon | 1.70e-14 | 29 |
cerebral cortex | 2.22e-10 | 21 |
cerebral hemisphere | 2.22e-10 | 21 |
pallium | 2.22e-10 | 21 |
regional part of cerebral cortex | 3.21e-08 | 17 |
occipital lobe | 3.37e-07 | 10 |
visual cortex | 3.37e-07 | 10 |
neocortex | 3.37e-07 | 10 |
embryo | 5.07e-07 | 320 |