FFCP PHASE1:Mm9::chr1:44176797..44176830,+: Difference between revisions
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{{FFCP|EntrezGene=246229|HGNC=|MCL_coexpression_id=1|UniProt=Q8CBX9|association_with_transcript=0bp_to_ENSMUST00000114709,ENSMUST00000129068,NM_144558,uc007awf.2_5end|description=CAGE_peak_3_at_Bivm_5end|id=chr1:44176797..44176830,+|ontology_enrichment_celltype=CL:0000117!9.28e-09!23;CL:0000337!9.28e-09!23;CL:0000540!1.32e-07!33;CL:0000047!1.32e-07!33;CL:0000031!1.32e-07!33;CL:0000404!1.32e-07!33;CL:0000393!2.14e-07!39;CL:0000211!2.14e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.93e-11,23;CL:0000337,4.93e-11,23;CL:0000540,1.08e-07,33;CL:0000047,1.08e-07,33;CL:0000031,1.08e-07,33;CL:0000404,1.08e-07,33;CL:0000393,6.32e-07,39;CL:0000211,6.32e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.41e-14!63;UBERON:0002346!7.25e-14!71;UBERON:0003075!7.25e-14!71;UBERON:0007284!7.25e-14!71;UBERON:0000955!1.18e-13!50;UBERON:0006238!1.18e-13!50;UBERON:0002020!1.25e-13!34;UBERON:0001049!2.45e-13!52;UBERON:0005068!2.45e-13!52;UBERON:0006241!2.45e-13!52;UBERON:0007135!2.45e-13!52;UBERON:0003056!4.26e-13!49;UBERON:0002616!5.14e-13!49;UBERON:0001017!9.27e-13!73;UBERON:0005743!9.27e-13!73;UBERON:0000073!1.07e-12!75;UBERON:0001016!1.07e-12!75;UBERON:0002791!2.10e-12!29;UBERON:0003528!2.10e-12!29;UBERON:0001893!2.10e-12!29;UBERON:0003080!9.45e-12!40;UBERON:0004121!2.16e-11!102;UBERON:0000924!2.16e-11!102;UBERON:0006601!2.16e-11!102;UBERON:0002780!3.61e-11!39;UBERON:0001890!3.61e-11!39;UBERON:0006240!3.61e-11!39;UBERON:0004111!7.05e-11!122;UBERON:0000956!9.19e-11!21;UBERON:0001869!9.19e-11!21;UBERON:0000203!9.19e-11!21;UBERON:0000025!1.24e-10!114;UBERON:0002619!1.81e-08!17;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-18,54;UBERON:0002346,1.56e-17,64;UBERON:0003075,1.56e-17,64;UBERON:0007284,1.56e-17,64;UBERON:0002020,3.12e-17,34;UBERON:0001049,9.51e-17,52;UBERON:0005068,9.51e-17,52;UBERON:0006241,9.51e-17,52;UBERON:0007135,9.51e-17,52;UBERON:0003528,3.00e-16,29;UBERON:0002791,3.00e-16,29;UBERON:0001893,3.00e-16,29;UBERON:0000955,1.25e-15,47;UBERON:0006238,1.25e-15,47;UBERON:0001017,3.49e-15,73;UBERON:0001016,6.73e-15,75;UBERON:0002616,8.37e-15,46;UBERON:0010371,9.49e-15,73;UBERON:0010314,1.41e-14,92;UBERON:0003056,2.19e-14,49;UBERON:0000956,3.24e-14,21;UBERON:0001869,3.24e-14,21;UBERON:0000203,3.24e-14,21;UBERON:0003080,4.00e-14,40;UBERON:0002780,2.32e-13,39;UBERON:0001890,2.32e-13,39;UBERON:0006240,2.32e-13,39;UBERON:0004121,5.23e-13,95;UBERON:0000924,5.23e-13,95;UBERON:0006601,5.23e-13,95;UBERON:0002619,4.02e-11,17;UBERON:0000025,2.84e-10,114;UBERON:0004111,4.83e-10,122;UBERON:0002021,2.72e-09,10;UBERON:0000411,2.72e-09,10;UBERON:0001950,2.72e-09,10|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.02051948181284,0.297872853602656,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0.665191531965914,0,0,0,1.44425809875637,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.377690453926732,1.01376931219515,1.28482726513177,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,0.85960031981627,1.03134418455488,2.02316460859598,0.528990979272033,1.26766280701236,0.677689064138264,0,0.449949858640699,0.988866362566974,1.4209602298922,0,0.384218305321555,3.31806759387129,1.89008313664367,2.73422449756797,0.856952953211411,1.10434270475807,3.42974237801871,3.1629005436018,2.75765635983006,2.20231761998777,3.06449611404451,1.99688493233117,3.42904348098504,2.47016637726506,2.6045668527838,1.11673199600552,0,2.13917546887534,2.06240009831567,2.56269025438385,1.3047961207771,0.605809546665472,1.058001841495,0.579728977403356,1.72084775396277,0,1.61910957491345,2.59910566979068,0.448026887097336,0.842666520790511,1.70430322578058,0.779358013808606,1.41335829804136,1.54927761754349,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,0.5709193985953,0.776813650941515,0.593768556259299,1.21439728736295,0.304465478312141,0.461230994512117,0.753613202763113,0.587943535678524,0.628332956648377,0.494389935468748,0.86759614151947,0,0.808834249737046,0,0,0,1.75668478206928,1.67557365450764,0.510914110417183,0.718890747035522,0.599902730993408,0.381210681219194,3.14560342750128,0.915001205637253,4.64921102817598,3.12883776346098,3.3243009452943,2.49345653471472,2.75810147215188,1.12023300235348,0.124406970610093,0.505445516867349,0.841767423545896,0.910843100738926,1.60931473103431,1.80062129805349,1.05493372485001,1.2246569847239,1.0249097622788,0.843315521037559,1.81092359517311,0.862271971731369,2.08016688184601,1.93546236580344,0.876782929710299,1.39023624612799,0,1.02891068203972,0.59710280045548,0,1.28673953557358,0.568326998791185,0.828503090142008,0.938104239924385,1.08037236876609,1.65721314909647,0.787056926989615,1.54267112887378,1.39520366850245,0.536546802799238,0.467061369468678,0.822799249567402,1.47750717671186,1.29710095273369,1.16959989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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246229 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CBX9 | |||
|association_with_transcript=0bp_to_ENSMUST00000114709,ENSMUST00000129068,NM_144558,uc007awf.2_5end | |||
|cluster_id=chr1:44176797..44176830,+ | |||
|description=CAGE_peak_3_at_Bivm_5end | |||
|id=chr1:44176797..44176830,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.28e-09!23;CL:0000337!9.28e-09!23;CL:0000540!1.32e-07!33;CL:0000047!1.32e-07!33;CL:0000031!1.32e-07!33;CL:0000404!1.32e-07!33;CL:0000393!2.14e-07!39;CL:0000211!2.14e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.93e-11,23;CL:0000337,4.93e-11,23;CL:0000540,1.08e-07,33;CL:0000047,1.08e-07,33;CL:0000031,1.08e-07,33;CL:0000404,1.08e-07,33;CL:0000393,6.32e-07,39;CL:0000211,6.32e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.41e-14!63;UBERON:0002346!7.25e-14!71;UBERON:0003075!7.25e-14!71;UBERON:0007284!7.25e-14!71;UBERON:0000955!1.18e-13!50;UBERON:0006238!1.18e-13!50;UBERON:0002020!1.25e-13!34;UBERON:0001049!2.45e-13!52;UBERON:0005068!2.45e-13!52;UBERON:0006241!2.45e-13!52;UBERON:0007135!2.45e-13!52;UBERON:0003056!4.26e-13!49;UBERON:0002616!5.14e-13!49;UBERON:0001017!9.27e-13!73;UBERON:0005743!9.27e-13!73;UBERON:0000073!1.07e-12!75;UBERON:0001016!1.07e-12!75;UBERON:0002791!2.10e-12!29;UBERON:0003528!2.10e-12!29;UBERON:0001893!2.10e-12!29;UBERON:0003080!9.45e-12!40;UBERON:0004121!2.16e-11!102;UBERON:0000924!2.16e-11!102;UBERON:0006601!2.16e-11!102;UBERON:0002780!3.61e-11!39;UBERON:0001890!3.61e-11!39;UBERON:0006240!3.61e-11!39;UBERON:0004111!7.05e-11!122;UBERON:0000956!9.19e-11!21;UBERON:0001869!9.19e-11!21;UBERON:0000203!9.19e-11!21;UBERON:0000025!1.24e-10!114;UBERON:0002619!1.81e-08!17;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-18,54;UBERON:0002346,1.56e-17,64;UBERON:0003075,1.56e-17,64;UBERON:0007284,1.56e-17,64;UBERON:0002020,3.12e-17,34;UBERON:0001049,9.51e-17,52;UBERON:0005068,9.51e-17,52;UBERON:0006241,9.51e-17,52;UBERON:0007135,9.51e-17,52;UBERON:0003528,3.00e-16,29;UBERON:0002791,3.00e-16,29;UBERON:0001893,3.00e-16,29;UBERON:0000955,1.25e-15,47;UBERON:0006238,1.25e-15,47;UBERON:0001017,3.49e-15,73;UBERON:0001016,6.73e-15,75;UBERON:0002616,8.37e-15,46;UBERON:0010371,9.49e-15,73;UBERON:0010314,1.41e-14,92;UBERON:0003056,2.19e-14,49;UBERON:0000956,3.24e-14,21;UBERON:0001869,3.24e-14,21;UBERON:0000203,3.24e-14,21;UBERON:0003080,4.00e-14,40;UBERON:0002780,2.32e-13,39;UBERON:0001890,2.32e-13,39;UBERON:0006240,2.32e-13,39;UBERON:0004121,5.23e-13,95;UBERON:0000924,5.23e-13,95;UBERON:0006601,5.23e-13,95;UBERON:0002619,4.02e-11,17;UBERON:0000025,2.84e-10,114;UBERON:0004111,4.83e-10,122;UBERON:0002021,2.72e-09,10;UBERON:0000411,2.72e-09,10;UBERON:0001950,2.72e-09,10 | |||
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| |||
|short_description=p3@Bivm | |||
}} |
Latest revision as of 04:17, 27 September 2015
Short description: | p3@Bivm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bivm_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000114709, ENSMUST00000129068, NM_144558, uc007awf.2_5end |
EntrezGene: | Bivm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.93e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.93e-11 | 23 |
neuron | 1.08e-07 | 33 |
neuronal stem cell | 1.08e-07 | 33 |
neuroblast | 1.08e-07 | 33 |
electrically signaling cell | 1.08e-07 | 33 |
electrically responsive cell | 6.32e-07 | 39 |
electrically active cell | 6.32e-07 | 39 |