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FFCP PHASE1:Mm9::chr18:37595256..37595290,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93883
|EntrezGene=93883
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=F6V243,Q91Y07
|UniProt=F6V243,Q91Y07
|association_with_transcript=0bp_to_ENSMUST00000055495,NM_053137,uc008epx.1_5end
|association_with_transcript=0bp_to_ENSMUST00000055495,NM_053137,uc008epx.1_5end
|cluster_id=chr18:37595256..37595290,+
|description=CAGE_peak_1_at_Pcdhb12_5end
|description=CAGE_peak_1_at_Pcdhb12_5end
|id=chr18:37595256..37595290,+
|id=chr18:37595256..37595290,+
|ontology_enrichment_celltype=CL:0000540!1.47e-07!33;CL:0000047!1.47e-07!33;CL:0000031!1.47e-07!33;CL:0000404!1.47e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.41e-08,23;CL:0000337,7.41e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.30e-17!73;UBERON:0005743!6.30e-17!73;UBERON:0000033!7.31e-17!63;UBERON:0000073!1.00e-16!75;UBERON:0001016!1.00e-16!75;UBERON:0001049!3.54e-16!52;UBERON:0005068!3.54e-16!52;UBERON:0006241!3.54e-16!52;UBERON:0007135!3.54e-16!52;UBERON:0004121!9.25e-16!102;UBERON:0000924!9.25e-16!102;UBERON:0006601!9.25e-16!102;UBERON:0002346!1.36e-15!71;UBERON:0003075!1.36e-15!71;UBERON:0007284!1.36e-15!71;UBERON:0000955!2.92e-14!50;UBERON:0006238!2.92e-14!50;UBERON:0003056!3.26e-14!49;UBERON:0002616!1.26e-13!49;UBERON:0002020!9.32e-13!34;UBERON:0003080!2.18e-12!40;UBERON:0002780!9.18e-12!39;UBERON:0001890!9.18e-12!39;UBERON:0006240!9.18e-12!39;UBERON:0002791!1.94e-10!29;UBERON:0003528!1.94e-10!29;UBERON:0001893!1.94e-10!29;UBERON:0004111!7.89e-09!122;UBERON:0002021!1.77e-08!10;UBERON:0000411!1.77e-08!10;UBERON:0001950!1.77e-08!10;UBERON:0000025!2.52e-08!114;UBERON:0007811!9.52e-08!86;UBERON:0000956!3.50e-07!21;UBERON:0001869!3.50e-07!21;UBERON:0000203!3.50e-07!21;UBERON:0000153!3.59e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-27,54;UBERON:0001017,2.13e-27,73;UBERON:0001049,5.90e-27,52;UBERON:0005068,5.90e-27,52;UBERON:0006241,5.90e-27,52;UBERON:0007135,5.90e-27,52;UBERON:0001016,2.10e-26,75;UBERON:0004121,1.26e-25,95;UBERON:0000924,1.26e-25,95;UBERON:0006601,1.26e-25,95;UBERON:0010371,1.27e-25,73;UBERON:0002346,3.40e-25,64;UBERON:0003075,3.40e-25,64;UBERON:0007284,3.40e-25,64;UBERON:0002020,2.68e-23,34;UBERON:0000955,1.35e-22,47;UBERON:0006238,1.35e-22,47;UBERON:0002616,3.44e-21,46;UBERON:0002021,5.34e-19,10;UBERON:0000411,5.34e-19,10;UBERON:0001950,5.34e-19,10;UBERON:0003528,9.82e-19,29;UBERON:0002791,9.82e-19,29;UBERON:0001893,9.82e-19,29;UBERON:0003056,1.92e-17,49;UBERON:0003080,2.35e-17,40;UBERON:0010314,3.29e-17,92;UBERON:0002780,4.75e-16,39;UBERON:0001890,4.75e-16,39;UBERON:0006240,4.75e-16,39;UBERON:0002619,2.12e-14,17;UBERON:0004111,1.37e-13,122;UBERON:0000956,2.95e-13,21;UBERON:0001869,2.95e-13,21;UBERON:0000203,2.95e-13,21;UBERON:0000025,4.02e-13,114;UBERON:0003076,1.64e-10,12;UBERON:0003057,1.64e-10,12;UBERON:0000483,3.21e-09,174;UBERON:0000119,5.37e-09,176;UBERON:0011216,1.33e-08,194;UBERON:0002240,3.91e-07,6;UBERON:0005174,3.91e-07,6;UBERON:0001137,3.91e-07,6;UBERON:0002950,4.64e-07,4;UBERON:0001891,4.64e-07,4;UBERON:0009616,4.64e-07,4;UBERON:0010286,4.64e-07,4
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.210324961351382,1.71390590642282,1.54607978666129,0.734944795289724,0.0958454710182364,0,0,1.53224805702225,1.68967186581868,0.395658863190582,1.28082701043374,0.52091337055676,2.23346399201105,1.12552522006336,1.37518422999129,2.35702868378934,1.56608848879013,0.372798891650601,0.075726193333184,0.302286240427142,1.44932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0.519572009205738,0.70667914902068,1.69012103732017,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0,0,1.75668478206928,3.14170060220183,0.255457055208591,0,0,0,2.54644086988199,2.28750301409313,1.00523481690292,3.47648640384553,3.06858548796397,2.28566849015516,2.92034273521964,0.203678727700633,0.622034853050465,0.252722758433675,0.631325567659422,0,0.229902104433473,0.540186389416048,0.60281927134286,1.08858398642125,0.512454881139399,1.3118241438362,2.84573707812917,0,0.567318240503458,0,0.876782929710299,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.492502392237286,0.648550476366846,0.292399974850665,0.219550115291051,0.536825675041487,2.3131894342054,1.23485534855141,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.350679099451593,1.13825766823663,0.738050739898011,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.630540576424764,2.43611158613652,1.59454768657487,0.327726629431476,0.863424909329478,1.3018415272336,0,0,0,1.10374698521893,1.9266070798535,1.40654023910644,0.163934945376675,0.252470927204373,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,2.57057053137446,0.851640511249612,0,0.651547837414304,1.81467135269789,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.603129249281559,0,0.164140899745061,0,1.48340241608408,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.904118764344118,0.506868376472335,0.938857909166032,0.39061315453185,0.734015410979976,0.241584120826006,0,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.93841237725591,0.915758121336325,0.214368379079066,0,2.82375921308533,2.30162618253588,4.01026859407578,4.46818274093588,4.7955776383945,3.0215755895588,3.37511250115903,4.5032120322422,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.512201219238954,0.402048282689293,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.564656282491984,0.423073039458382,0.182927972872773,0.263069711437843,0.679020569229309,0,0.593175090620871,0.394017929502254,0,0.464810523557898,0.771626443924566,0.999242311751784,0.233931608445408,0,0.956441660344217,0.220591419119515,0.463735671240843
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.540023753326763,0.210324961351382,1.71390590642282,1.54607978666129,0.734944795289724,0.0958454710182364,0,0,1.53224805702225,1.68967186581868,0.395658863190582,1.28082701043374,0.52091337055676,2.23346399201105,1.12552522006336,1.37518422999129,2.35702868378934,1.56608848879013,0.372798891650601,0.075726193333184,0.302286240427142,1.44932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0.681721290312231,0.519572009205738,0.70667914902068,1.69012103732017,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0,0,1.75668478206928,3.14170060220183,0.255457055208591,0,0,0,2.54644086988199,2.28750301409313,1.00523481690292,3.47648640384553,3.06858548796397,2.28566849015516,2.92034273521964,0.203678727700633,0.622034853050465,0.252722758433675,0.631325567659422,0,0.229902104433473,0.540186389416048,0.60281927134286,1.08858398642125,0.512454881139399,1.3118241438362,2.84573707812917,0,0.567318240503458,0,0.876782929710299,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.492502392237286,0.648550476366846,0.292399974850665,0.219550115291051,0.536825675041487,2.3131894342054,1.23485534855141,0,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.350679099451593,1.13825766823663,0.738050739898011,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,1.47802552133284,0,0.651859905768103,0.678980343100753,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.630540576424764,2.43611158613652,1.59454768657487,0.327726629431476,0.863424909329478,1.3018415272336,0,0,0,1.10374698521893,1.9266070798535,1.40654023910644,0.163934945376675,0.252470927204373,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,2.57057053137446,0.851640511249612,0,0.651547837414304,1.81467135269789,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.532020700926821,0.535106452806212,0.658196082408484,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.603129249281559,0,0.164140899745061,0,1.48340241608408,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.904118764344118,0.506868376472335,0.938857909166032,0.39061315453185,0.734015410979976,0.241584120826006,0,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.93841237725591,0.915758121336325,0.214368379079066,0,2.82375921308533,2.30162618253588,4.01026859407578,4.46818274093588,4.7955776383945,3.0215755895588,3.37511250115903,4.5032120322422,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.512201219238954,0.402048282689293,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.564656282491984,0.423073039458382,0.182927972872773,0.263069711437843,0.679020569229309,0,0.593175090620871,0.394017929502254,0,0.464810523557898,0.771626443924566,0.999242311751784,0.233931608445408,0,0.956441660344217,0.220591419119515,0.463735671240843
|short_description=p1@Pcdhb12
|short_description=p1@Pcdhb12
}}
}}

Latest revision as of 05:46, 27 September 2015

Short description:p1@Pcdhb12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdhb12_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000055495, NM_053137, uc008epx.1_5end
EntrezGene:Pcdhb12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcdhb12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.41e-0823
neuroblast (sensu Vertebrata)7.41e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.31e-2754
central nervous system2.13e-2773
neural tube5.90e-2752
neural rod5.90e-2752
future spinal cord5.90e-2752
neural keel5.90e-2752
nervous system2.10e-2675
ectoderm-derived structure1.26e-2595
ectoderm1.26e-2595
presumptive ectoderm1.26e-2595
ecto-epithelium1.27e-2573
neurectoderm3.40e-2564
neural plate3.40e-2564
presumptive neural plate3.40e-2564
gray matter2.68e-2334
brain1.35e-2247
future brain1.35e-2247
regional part of brain3.44e-2146
occipital lobe5.34e-1910
visual cortex5.34e-1910
neocortex5.34e-1910
brain grey matter9.82e-1929
regional part of telencephalon9.82e-1929
telencephalon9.82e-1929
pre-chordal neural plate1.92e-1749
anterior neural tube2.35e-1740
structure with developmental contribution from neural crest3.29e-1792
regional part of forebrain4.75e-1639
forebrain4.75e-1639
future forebrain4.75e-1639
regional part of cerebral cortex2.12e-1417
anatomical conduit1.37e-13122
cerebral cortex2.95e-1321
cerebral hemisphere2.95e-1321
pallium2.95e-1321
tube4.02e-13114
posterior neural tube1.64e-1012
chordal neural plate1.64e-1012
epithelium3.21e-09174
cell layer5.37e-09176
organ system subdivision1.33e-08194
spinal cord3.91e-076
dorsal region element3.91e-076
dorsum3.91e-076
regional part of midbrain4.64e-074
midbrain4.64e-074
presumptive midbrain4.64e-074
midbrain neural tube4.64e-074
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