FFCP PHASE1:Mm9::chr18:37866849..37866880,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:37866849..37866880,+ to FFCP PHASE1:Mm9::chr18:37866849..37866880,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=93714 | |EntrezGene=93714 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XY2 | |UniProt=Q91XY2 | ||
|association_with_transcript=-2bp_to_NM_033589,uc008eqs.1_5end | |||
|cluster_id=chr18:37866849..37866880,+ | |||
|description=CAGE_peak_1_at_Pcdhga6_5end | |||
|id=chr18:37866849..37866880,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-07,23;CL:0000337,2.18e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0001017!2.40e-20!73;UBERON:0005743!2.40e-20!73;UBERON:0001049!6.43e-20!52;UBERON:0005068!6.43e-20!52;UBERON:0006241!6.43e-20!52;UBERON:0007135!6.43e-20!52;UBERON:0000073!7.66e-20!75;UBERON:0001016!7.66e-20!75;UBERON:0004121!1.51e-17!102;UBERON:0000924!1.51e-17!102;UBERON:0006601!1.51e-17!102;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0000033!3.48e-17!63;UBERON:0002616!1.23e-16!49;UBERON:0003056!5.56e-14!49;UBERON:0003080!7.78e-14!40;UBERON:0002780!3.73e-13!39;UBERON:0001890!3.73e-13!39;UBERON:0006240!3.73e-13!39;UBERON:0002020!4.20e-11!34;UBERON:0000025!3.52e-09!114;UBERON:0004111!5.29e-09!122;UBERON:0002791!1.07e-08!29;UBERON:0003528!1.07e-08!29;UBERON:0001893!1.07e-08!29;UBERON:0000153!2.03e-08!94;UBERON:0007811!6.52e-08!86;UBERON:0003076!5.72e-07!12;UBERON:0003057!5.72e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.76e-24,54;UBERON:0001049,7.61e-24,52;UBERON:0005068,7.61e-24,52;UBERON:0006241,7.61e-24,52;UBERON:0007135,7.61e-24,52;UBERON:0001017,6.52e-23,73;UBERON:0001016,5.45e-22,75;UBERON:0002346,1.70e-21,64;UBERON:0003075,1.70e-21,64;UBERON:0007284,1.70e-21,64;UBERON:0000955,4.75e-20,47;UBERON:0006238,4.75e-20,47;UBERON:0002616,8.96e-19,46;UBERON:0004121,4.27e-18,95;UBERON:0000924,4.27e-18,95;UBERON:0006601,4.27e-18,95;UBERON:0010371,1.53e-17,73;UBERON:0003080,6.07e-17,40;UBERON:0003056,2.95e-16,49;UBERON:0002780,1.02e-15,39;UBERON:0001890,1.02e-15,39;UBERON:0006240,1.02e-15,39;UBERON:0002020,3.15e-14,34;UBERON:0010314,1.23e-13,92;UBERON:0003528,1.23e-10,29;UBERON:0002791,1.23e-10,29;UBERON:0001893,1.23e-10,29;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0000369,1.34e-07,5;UBERON:0002435,1.34e-07,5;UBERON:0000204,1.34e-07,5;UBERON:0010082,1.34e-07,5;UBERON:0003076,1.44e-07,12;UBERON:0003057,1.44e-07,12;UBERON:0000025,1.45e-07,114 | |||
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| ||
|short_description=p1@Pcdhga6 | |||
}} | }} |
Latest revision as of 05:53, 27 September 2015
Short description: | p1@Pcdhga6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhga6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -2bp_to_NM_033589, uc008eqs.1_5end |
EntrezGene: | Pcdhga6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.18e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.18e-07 | 23 |