FFCP PHASE1:Mm9::chr18:37906625..37906677,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:37906625..37906677,+ to FFCP PHASE1:Mm9::chr18:37906625..37906677,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=93722 | |EntrezGene=93722 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XY9 | |UniProt=Q91XY9 | ||
|association_with_transcript=-164bp_to_NM_033593,uc008eqz.1_5end | |||
|cluster_id=chr18:37906625..37906677,+ | |||
|description=CAGE_peak_1_at_Pcdhga10_5end | |||
|id=chr18:37906625..37906677,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.27e-11!44;CL:0000133!2.27e-11!44;CL:0002319!4.04e-11!43;CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000055!7.58e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.24e-12,44;CL:0000133,5.24e-12,44;CL:0002319,9.57e-12,43;CL:0000117,9.07e-11,23;CL:0000337,9.07e-11,23;CL:0000540,8.71e-09,33;CL:0000047,8.71e-09,33;CL:0000031,8.71e-09,33;CL:0000404,8.71e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.77e-26!102;UBERON:0000924!1.77e-26!102;UBERON:0006601!1.77e-26!102;UBERON:0000073!1.70e-25!75;UBERON:0001016!1.70e-25!75;UBERON:0001017!2.39e-25!73;UBERON:0005743!2.39e-25!73;UBERON:0002346!6.47e-24!71;UBERON:0003075!6.47e-24!71;UBERON:0007284!6.47e-24!71;UBERON:0001049!1.91e-23!52;UBERON:0005068!1.91e-23!52;UBERON:0006241!1.91e-23!52;UBERON:0007135!1.91e-23!52;UBERON:0000033!1.35e-22!63;UBERON:0000955!4.21e-21!50;UBERON:0006238!4.21e-21!50;UBERON:0002616!1.91e-20!49;UBERON:0003056!2.20e-17!49;UBERON:0003080!2.12e-16!40;UBERON:0002780!8.40e-16!39;UBERON:0001890!8.40e-16!39;UBERON:0006240!8.40e-16!39;UBERON:0002020!2.44e-15!34;UBERON:0000025!1.11e-13!114;UBERON:0004111!1.57e-13!122;UBERON:0002791!2.30e-12!29;UBERON:0003528!2.30e-12!29;UBERON:0001893!2.30e-12!29;UBERON:0000153!8.13e-12!94;UBERON:0007811!5.87e-11!86;UBERON:0000956!3.00e-09!21;UBERON:0001869!3.00e-09!21;UBERON:0000203!3.00e-09!21;UBERON:0000468!5.27e-09!333;UBERON:0002619!4.86e-08!17;UBERON:0003076!9.10e-08!12;UBERON:0003057!9.10e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.50e-29,92;UBERON:0004121,3.75e-27,95;UBERON:0000924,3.75e-27,95;UBERON:0006601,3.75e-27,95;UBERON:0001016,9.05e-27,75;UBERON:0001017,1.28e-26,73;UBERON:0002346,9.87e-25,64;UBERON:0003075,9.87e-25,64;UBERON:0007284,9.87e-25,64;UBERON:0000073,1.37e-24,54;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0010371,1.02e-23,73;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0003056,4.95e-18,49;UBERON:0003080,5.25e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,6.68e-16,34;UBERON:0000025,9.88e-15,114;UBERON:0004111,4.38e-14,122;UBERON:0003528,8.33e-13,29;UBERON:0002791,8.33e-13,29;UBERON:0001893,8.33e-13,29;UBERON:0000956,1.45e-09,21;UBERON:0001869,1.45e-09,21;UBERON:0000203,1.45e-09,21;UBERON:0002619,2.64e-08,17;UBERON:0003076,5.07e-08,12;UBERON:0003057,5.07e-08,12 | |||
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| ||
|short_description=p1@Pcdhga10 | |||
}} | }} |
Latest revision as of 05:55, 27 September 2015
Short description: | p1@Pcdhga10 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhga10_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -164bp_to_NM_033593, uc008eqz.1_5end |
EntrezGene: | Pcdhga10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 5.24e-12 | 44 |
neurectodermal cell | 5.24e-12 | 44 |
neural cell | 9.57e-12 | 43 |
CNS neuron (sensu Vertebrata) | 9.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.07e-11 | 23 |
neuron | 8.71e-09 | 33 |
neuronal stem cell | 8.71e-09 | 33 |
neuroblast | 8.71e-09 | 33 |
electrically signaling cell | 8.71e-09 | 33 |