FFCP PHASE1:Mm9::chr3:108218929..108218968,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:108218929..108218968,- to FFCP PHASE1:Mm9::chr3:108218929..108218968,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=53883 | |EntrezGene=53883 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AEE7 | |UniProt=A2AEE7 | ||
|association_with_transcript=-459bp_to_ENSMUST00000090558_5end | |||
|cluster_id=chr3:108218929..108218968,- | |||
|description=CAGE_peak_1_at_Celsr2_5end | |||
|id=chr3:108218929..108218968,- | |||
|ontology_enrichment_celltype=CL:0000221!6.76e-17!44;CL:0000133!6.76e-17!44;CL:0002319!1.51e-16!43;CL:0000540!1.79e-14!33;CL:0000047!1.79e-14!33;CL:0000031!1.79e-14!33;CL:0000404!1.79e-14!33;CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0000055!3.54e-10!50;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.06e-17,44;CL:0000133,4.06e-17,44;CL:0002319,9.19e-17,43;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000117,1.09e-12,23;CL:0000337,1.09e-12,23;CL:0000393,4.25e-09,39;CL:0000211,4.25e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.30e-36!102;UBERON:0000924!2.30e-36!102;UBERON:0006601!2.30e-36!102;UBERON:0001017!3.05e-33!73;UBERON:0005743!3.05e-33!73;UBERON:0000073!3.40e-32!75;UBERON:0001016!3.40e-32!75;UBERON:0000033!1.99e-26!63;UBERON:0002346!2.22e-24!71;UBERON:0003075!2.22e-24!71;UBERON:0007284!2.22e-24!71;UBERON:0001049!1.17e-23!52;UBERON:0005068!1.17e-23!52;UBERON:0006241!1.17e-23!52;UBERON:0007135!1.17e-23!52;UBERON:0000955!4.89e-23!50;UBERON:0006238!4.89e-23!50;UBERON:0002616!1.71e-22!49;UBERON:0003056!8.55e-21!49;UBERON:0002020!2.20e-19!34;UBERON:0003080!2.36e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!4.40e-17!29;UBERON:0003528!4.40e-17!29;UBERON:0001893!4.40e-17!29;UBERON:0007811!3.65e-15!86;UBERON:0000153!1.33e-14!94;UBERON:0000956!4.74e-13!21;UBERON:0001869!4.74e-13!21;UBERON:0000203!4.74e-13!21;UBERON:0002619!1.26e-10!17;UBERON:0000468!4.43e-09!333;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0000475!3.28e-07!200;UBERON:0000922!6.73e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.37e-39,95;UBERON:0000924,1.37e-39,95;UBERON:0006601,1.37e-39,95;UBERON:0001017,1.06e-33,73;UBERON:0001016,1.22e-32,75;UBERON:0010371,1.65e-31,73;UBERON:0002346,1.67e-27,64;UBERON:0003075,1.67e-27,64;UBERON:0007284,1.67e-27,64;UBERON:0000073,2.27e-25,54;UBERON:0001049,5.63e-24,52;UBERON:0005068,5.63e-24,52;UBERON:0006241,5.63e-24,52;UBERON:0007135,5.63e-24,52;UBERON:0000955,2.39e-21,47;UBERON:0006238,2.39e-21,47;UBERON:0003056,4.52e-21,49;UBERON:0002616,8.31e-21,46;UBERON:0002020,1.22e-19,34;UBERON:0003080,1.35e-18,40;UBERON:0002780,6.36e-18,39;UBERON:0001890,6.36e-18,39;UBERON:0006240,6.36e-18,39;UBERON:0003528,2.63e-17,29;UBERON:0002791,2.63e-17,29;UBERON:0001893,2.63e-17,29;UBERON:0010314,1.48e-15,92;UBERON:0000956,3.24e-13,21;UBERON:0001869,3.24e-13,21;UBERON:0000203,3.24e-13,21;UBERON:0002619,9.34e-11,17;UBERON:0002021,9.64e-08,10;UBERON:0000411,9.64e-08,10;UBERON:0001950,9.64e-08,10;UBERON:0000479,8.64e-07,349 | |||
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| ||
|short_description=p1@Celsr2 | |||
}} | }} |
Latest revision as of 07:31, 27 September 2015
Short description: | p1@Celsr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celsr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -459bp_to_ENSMUST00000090558_5end |
EntrezGene: | Celsr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.06e-17 | 44 |
neurectodermal cell | 4.06e-17 | 44 |
neural cell | 9.19e-17 | 43 |
neuron | 1.16e-14 | 33 |
neuronal stem cell | 1.16e-14 | 33 |
neuroblast | 1.16e-14 | 33 |
electrically signaling cell | 1.16e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.09e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-12 | 23 |
electrically responsive cell | 4.25e-09 | 39 |
electrically active cell | 4.25e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.37e-39 | 95 |
ectoderm | 1.37e-39 | 95 |
presumptive ectoderm | 1.37e-39 | 95 |
central nervous system | 1.06e-33 | 73 |
nervous system | 1.22e-32 | 75 |
ecto-epithelium | 1.65e-31 | 73 |
neurectoderm | 1.67e-27 | 64 |
neural plate | 1.67e-27 | 64 |
presumptive neural plate | 1.67e-27 | 64 |
regional part of nervous system | 2.27e-25 | 54 |
neural tube | 5.63e-24 | 52 |
neural rod | 5.63e-24 | 52 |
future spinal cord | 5.63e-24 | 52 |
neural keel | 5.63e-24 | 52 |
brain | 2.39e-21 | 47 |
future brain | 2.39e-21 | 47 |
pre-chordal neural plate | 4.52e-21 | 49 |
regional part of brain | 8.31e-21 | 46 |
gray matter | 1.22e-19 | 34 |
anterior neural tube | 1.35e-18 | 40 |
regional part of forebrain | 6.36e-18 | 39 |
forebrain | 6.36e-18 | 39 |
future forebrain | 6.36e-18 | 39 |
brain grey matter | 2.63e-17 | 29 |
regional part of telencephalon | 2.63e-17 | 29 |
telencephalon | 2.63e-17 | 29 |
structure with developmental contribution from neural crest | 1.48e-15 | 92 |
cerebral cortex | 3.24e-13 | 21 |
cerebral hemisphere | 3.24e-13 | 21 |
pallium | 3.24e-13 | 21 |
regional part of cerebral cortex | 9.34e-11 | 17 |
occipital lobe | 9.64e-08 | 10 |
visual cortex | 9.64e-08 | 10 |
neocortex | 9.64e-08 | 10 |
tissue | 8.64e-07 | 349 |