FFCP PHASE1:Mm9::chr8:113443726..113443756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20444 | |EntrezGene=20444 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1841 | |MCL_coexpression_id=1841 | ||
|TSSclassifier=NA | |||
|UniProt=Q11204,D3Z3V2 | |UniProt=Q11204,D3Z3V2 | ||
|association_with_transcript=-8bp_to_NM_009179,uc009nlj.2,uc009nlk.2_5end | |association_with_transcript=-8bp_to_NM_009179,uc009nlj.2,uc009nlk.2_5end | ||
|cluster_id=chr8:113443726..113443756,+ | |||
|description=CAGE_peak_3_at_St3gal2_5end | |description=CAGE_peak_3_at_St3gal2_5end | ||
|id=chr8:113443726..113443756,+ | |id=chr8:113443726..113443756,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.78e-11!23;CL:0000337!3.78e-11!23;CL:0002319!4.98e-09!43;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0000055!1.89e-07!50;CL:0000540!5.59e-07!33;CL:0000047!5.59e-07!33;CL:0000031!5.59e-07!33;CL:0000404!5.59e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.78e-11!23;CL:0000337!3.78e-11!23;CL:0002319!4.98e-09!43;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0000055!1.89e-07!50;CL:0000540!5.59e-07!33;CL:0000047!5.59e-07!33;CL:0000031!5.59e-07!33;CL:0000404!5.59e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-12,23;CL:0000337,1.54e-12,23;CL:0002319,6.81e-10,43;CL:0000221,2.23e-09,44;CL:0000133,2.23e-09,44;CL:0000540,3.17e-08,33;CL:0000047,3.17e-08,33;CL:0000031,3.17e-08,33;CL:0000404,3.17e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001017!1.78e-23!73;UBERON:0005743!1.78e-23!73;UBERON:0001049!2.27e-23!52;UBERON:0005068!2.27e-23!52;UBERON:0006241!2.27e-23!52;UBERON:0007135!2.27e-23!52;UBERON:0000955!3.33e-22!50;UBERON:0006238!3.33e-22!50;UBERON:0002616!1.03e-21!49;UBERON:0000033!8.11e-20!63;UBERON:0002346!2.78e-19!71;UBERON:0003075!2.78e-19!71;UBERON:0007284!2.78e-19!71;UBERON:0002020!1.31e-18!34;UBERON:0004121!1.55e-18!102;UBERON:0000924!1.55e-18!102;UBERON:0006601!1.55e-18!102;UBERON:0003080!1.89e-17!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0003056!7.49e-17!49;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!7.48e-12!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0000153!1.53e-11!94;UBERON:0002619!5.83e-10!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10;UBERON:0000025!5.33e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001017!1.78e-23!73;UBERON:0005743!1.78e-23!73;UBERON:0001049!2.27e-23!52;UBERON:0005068!2.27e-23!52;UBERON:0006241!2.27e-23!52;UBERON:0007135!2.27e-23!52;UBERON:0000955!3.33e-22!50;UBERON:0006238!3.33e-22!50;UBERON:0002616!1.03e-21!49;UBERON:0000033!8.11e-20!63;UBERON:0002346!2.78e-19!71;UBERON:0003075!2.78e-19!71;UBERON:0007284!2.78e-19!71;UBERON:0002020!1.31e-18!34;UBERON:0004121!1.55e-18!102;UBERON:0000924!1.55e-18!102;UBERON:0006601!1.55e-18!102;UBERON:0003080!1.89e-17!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0003056!7.49e-17!49;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!7.48e-12!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0000153!1.53e-11!94;UBERON:0002619!5.83e-10!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10;UBERON:0000025!5.33e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-26,54;UBERON:0001017,4.32e-26,73;UBERON:0001016,1.30e-25,75;UBERON:0001049,6.67e-25,52;UBERON:0005068,6.67e-25,52;UBERON:0006241,6.67e-25,52;UBERON:0007135,6.67e-25,52;UBERON:0002020,1.70e-21,34;UBERON:0000955,1.76e-21,47;UBERON:0006238,1.76e-21,47;UBERON:0002346,2.93e-21,64;UBERON:0003075,2.93e-21,64;UBERON:0007284,2.93e-21,64;UBERON:0002616,6.51e-21,46;UBERON:0004121,3.27e-19,95;UBERON:0000924,3.27e-19,95;UBERON:0006601,3.27e-19,95;UBERON:0003080,2.15e-18,40;UBERON:0003528,3.17e-18,29;UBERON:0002791,3.17e-18,29;UBERON:0001893,3.17e-18,29;UBERON:0002780,7.55e-18,39;UBERON:0001890,7.55e-18,39;UBERON:0006240,7.55e-18,39;UBERON:0010371,2.80e-17,73;UBERON:0003056,4.66e-17,49;UBERON:0010314,4.16e-15,92;UBERON:0000956,5.04e-13,21;UBERON:0001869,5.04e-13,21;UBERON:0000203,5.04e-13,21;UBERON:0002619,4.68e-11,17;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0003076,4.36e-07,12;UBERON:0003057,4.36e-07,12 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.234064526321993,0.513653904676515,0.797721589953364,0.856003649656029,0.34968160967599,0.999329285446988,0.202475267389826,0.699561878128147,1.26184866143295,0.822686601634433,0.84877930359606,0.680346321208558,0.794327609607082,0.522399578277871,0.47997726838022,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0.166234645358492,0,0.418531630736908,0,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.503587271902309,0.506884656097573,0.550640256485045,2.34717403304412,0.872100625521786,3.07560655828261,5.05517737593137,1.1198913730029,1.43752564364972,1.34226084846189,2.17608642603403,0,1.28629718017973,1.14613375975503,0.515672092277442,2.42779753031517,4.23192783417626,4.43681982454325,2.71075625655306,0.889294796111139,0.449949858640699,0,1.4209602298922,2.09720077362883,2.30530983192933,2.17748185847803,1.62007125998029,3.36519938162211,4.57041575046086,3.53389665522582,1.71487118900936,2.68367318851062,0.919218786610021,4.40463523997555,3.06449611404451,3.37934373163736,3.16527090552465,5.39777097254217,4.16730696445408,2.23346399201105,3.37657566019008,2.75036845998258,4.71405736757868,2.27794689278565,2.79599168737951,0.984440513331393,1.51143120213571,0.579728977403356,0.860423876981386,0,0,0,0,0.561777680527007,0.852151612890289,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,1.63286352971307,1.90833859442749,0.913396434936424,0.230615497256059,0.301445281105245,1.05829836422134,1.75933227861546,0.494389935468748,0.144599356919912,0.884610551949874,2.10296904931632,0.883366073841574,0,0,4.68449275218475,6.70229461803056,0.255457055208591,0.359445373517761,0,0.508280908292259,2.54644086988199,3.20250421973039,7.53926112677186,5.21472960576829,6.64860189058859,4.57133698031032,5.19172041816825,1.32391173005411,0.746441823660558,0.252722758433675,0.631325567659422,0.650602214813519,2.5289231487682,0.900310649026746,1.20563854268572,1.42876648217788,1.40925092313335,1.3118241438362,1.55222022443409,1.07783996466421,1.70195472151037,1.23165786914764,1.7535658594206,0.834141747676794,1.0447564995665,0.61734640922383,0.995171334092466,0.702213187313235,0,0.852490498186778,1.03562886267751,1.40715635988658,1.2604344302271,1.18372367792605,0.787056926989615,0.925602677324269,0.232533944750408,1.07309360559848,0.700592054203017,0.493679549740441,0.985004784474571,1.21603214318784,0.877199924551994,0.878200461164203,0.939444931322602,5.46753866266731,6.07137213037778,0,0,2.13288250535234,1.39342003116263,0.644337306610467,0.403367049246685,1.33426826306922,0.380451252225118,0.474529061544512,0.329397909448022,0,0,0.974820435595601,0.898819408654221,0,0.398282546508734,0.758671603812327,1.5994791765362,4.50830942692322,0.203651327845314,0.775809948670503,1.05203729835478,0.569128834118316,0.590440591918409,0.627994911365499,0.370191491765402,0,0.667380422864376,1.17935397067922,0.674586337154561,0.608580364165509,0,0.50925170356284,0,0.324270453550071,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0.554259570499814,1.32643988239339,0.814824882210129,0.509235257325564,1.64283173801951,0.837531287209079,1.90434912708811,1.17080188714679,1.26108115284953,1.10732344824387,0.956728611944923,0.983179888294428,1.38147985492716,0.578596234326046,1.50791283939272,0,0,0.551873492609465,4.0137647496948,3.04750385139728,1.80328439914343,1.76729649043061,0,0.390438744296638,0.430846795465598,1.43381278771531,0.668396022247182,0.566153061577665,1.61924280669958,0.584511715822624,0,2.57057053137446,0.709700426041343,2.13678724400706,1.95464351224291,0.659880491890142,1.32745138339963,0.485561272309963,0.906970670894253,0.754420319023592,0,0.922305443831782,1.03371317267288,1.81766864738753,0,0,0,0,2.04263763452273,1.44048875225048,1.4229455216103,0.857348140126369,1.41872186913819,1.96205699362278,0.987294123612726,0.913394847343798,0.938686832254841,0.21183207086382,0.220528398054962,0.49465875882444,0.807322133479528,1.02531972377865,0.716234064018819,0.984845398470368,0.582961673259701,2.78137953015765,1.36696704638282,0.206386867963223,1.11116716421827,1.50694765603753,1.23024804948923,0.228778173206523,0.849892149969277,0.419854356970974,1.10559979043539,0,0.790839983952838,1.21991680276109,0.756037385752609,0.418176592028937,0.655087691238533,0.944050424693745,0.578574190077352,0.785267825952089,0.388844919875379,0.621339313086926,0,1.79419855252775,2.48187735685646,1.16670713006429,1.93739735216597,1.85851738039856,2.93393096614385,3.77592716047455,3.14578033277133,0.241584120826006,0.576060012515731,0.948033361884535,1.82452693761148,0.616265742988964,0.51968329191118,0.716106782669926,0.79472541912506,1.44234539423963,0.443068581523732,0.807731599585181,0.457240839929999,1.10908803650525,0.779663045918019,0.962118416403295,0.818138315270983,0.226730383615211,0.443971906748129,0.179427713218951,0.335769232728157,1.15913756419314,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| ||
|short_description=p3@St3gal2 | |short_description=p3@St3gal2 | ||
}} | }} |
Latest revision as of 12:29, 1 October 2015
Short description: | p3@St3gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_St3gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1841 |
Association with transcript: | -8bp_to_NM_009179, uc009nlj.2, uc009nlk.2_5end |
EntrezGene: | St3gal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-12 | 23 |
neural cell | 6.81e-10 | 43 |
ectodermal cell | 2.23e-09 | 44 |
neurectodermal cell | 2.23e-09 | 44 |
neuron | 3.17e-08 | 33 |
neuronal stem cell | 3.17e-08 | 33 |
neuroblast | 3.17e-08 | 33 |
electrically signaling cell | 3.17e-08 | 33 |