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FFCP PHASE1:Mm9::chr15:97998247..97998304,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:97998247..97998304,+
|DHSsupport=NA
|short_description=p1@AI836003
|DPIdataset=NA
|description=CAGE_peak_1_at_AI836003_5end
|association_with_transcript=10bp_to_ENSMUST00000031914,NM_177716,uc011zys.1_5end
|EntrezGene=239650
|EntrezGene=239650
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8BMK5
|UniProt=Q8BMK5
|association_with_transcript=10bp_to_ENSMUST00000031914,NM_177716,uc011zys.1_5end
|cluster_id=chr15:97998247..97998304,+
|description=CAGE_peak_1_at_AI836003_5end
|id=chr15:97998247..97998304,+
|ontology_enrichment_celltype=CL:0000117!9.18e-14!23;CL:0000337!9.18e-14!23;CL:0002319!2.22e-12!43;CL:0000540!3.19e-12!33;CL:0000047!3.19e-12!33;CL:0000031!3.19e-12!33;CL:0000404!3.19e-12!33;CL:0000221!3.44e-12!44;CL:0000133!3.44e-12!44;CL:0000393!2.26e-09!39;CL:0000211!2.26e-09!39;CL:0000055!2.82e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.54e-15,23;CL:0000337,3.54e-15,23;CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0002319,3.57e-12,43;CL:0000221,5.47e-12,44;CL:0000133,5.47e-12,44;CL:0000393,3.03e-10,39;CL:0000211,3.03e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.99e-29!73;UBERON:0005743!5.99e-29!73;UBERON:0000073!2.08e-28!75;UBERON:0001016!2.08e-28!75;UBERON:0002346!7.60e-25!71;UBERON:0003075!7.60e-25!71;UBERON:0007284!7.60e-25!71;UBERON:0001049!2.79e-24!52;UBERON:0005068!2.79e-24!52;UBERON:0006241!2.79e-24!52;UBERON:0007135!2.79e-24!52;UBERON:0000955!2.13e-22!50;UBERON:0006238!2.13e-22!50;UBERON:0002616!6.92e-22!49;UBERON:0004121!1.14e-21!102;UBERON:0000924!1.14e-21!102;UBERON:0006601!1.14e-21!102;UBERON:0000033!1.56e-20!63;UBERON:0003056!1.21e-18!49;UBERON:0003080!1.92e-18!40;UBERON:0002020!2.60e-18!34;UBERON:0002780!8.41e-18!39;UBERON:0001890!8.41e-18!39;UBERON:0006240!8.41e-18!39;UBERON:0002791!9.03e-15!29;UBERON:0003528!9.03e-15!29;UBERON:0001893!9.03e-15!29;UBERON:0000956!5.10e-10!21;UBERON:0001869!5.10e-10!21;UBERON:0000203!5.10e-10!21;UBERON:0002619!4.82e-09!17;UBERON:0007811!7.19e-08!86;UBERON:0002021!4.33e-07!10;UBERON:0000411!4.33e-07!10;UBERON:0001950!4.33e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-30,73;UBERON:0001016,1.11e-29,75;UBERON:0000073,6.71e-28,54;UBERON:0002346,1.06e-26,64;UBERON:0003075,1.06e-26,64;UBERON:0007284,1.06e-26,64;UBERON:0001049,2.16e-26,52;UBERON:0005068,2.16e-26,52;UBERON:0006241,2.16e-26,52;UBERON:0007135,2.16e-26,52;UBERON:0004121,6.46e-23,95;UBERON:0000924,6.46e-23,95;UBERON:0006601,6.46e-23,95;UBERON:0000955,3.75e-22,47;UBERON:0006238,3.75e-22,47;UBERON:0002616,1.36e-21,46;UBERON:0003080,2.11e-20,40;UBERON:0002020,2.96e-20,34;UBERON:0010371,3.51e-20,73;UBERON:0003056,3.69e-20,49;UBERON:0002780,1.10e-19,39;UBERON:0001890,1.10e-19,39;UBERON:0006240,1.10e-19,39;UBERON:0003528,2.65e-16,29;UBERON:0002791,2.65e-16,29;UBERON:0001893,2.65e-16,29;UBERON:0010314,3.15e-16,92;UBERON:0000956,5.33e-11,21;UBERON:0001869,5.33e-11,21;UBERON:0000203,5.33e-11,21;UBERON:0002619,6.52e-10,17;UBERON:0002021,9.82e-08,10;UBERON:0000411,9.82e-08,10;UBERON:0001950,9.82e-08,10
|phase1_expression=0.960893082628764,4.53668029931169,2.27499619694768,0,0,1.17515490338323,2.10251376535973,0.258246646883153,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,23.5569913718463,0,0,1.75991665072747,2.06468352960453,2.29692785646008,3.01533397311352,4.09395342103189,0.380046838912748,0.252030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.14024590558481,1.4192770370732,2.56965453026354,0.782391344348039,4.57852828398938,4.17403747195497,3.69416808241138,1.53985063787899,5.75010257459886,0,0,0,0,0,0,98.5281164386241,120.609943274023,114.723484034618,1.0165335962074,0.889294796111139,1.3498495759221,2.96659908770092,4.2628806896766,5.99200221036809,18.4424786554346,6.53244557543409,8.6403800532282,7.57169860864975,105.976515213811,128.324622292887,16.2912762955889,14.3768206527355,22.0612508786405,85.8903871795232,58.2254261668456,73.1167098299719,129.776107126511,115.091455651831,96.8898869235574,74.8210437323701,60.7783618834214,48.1314480496952,144.662635467571,112.331256150492,105.688485782945,1.8931548333296,0.68014404096107,0,0,0,0.539703191637817,0,0,5.47733238513832,2.38602451609281,2.33807404142582,2.82671659608272,1.12674735821344,0,0,0,0.216491041011214,0,0,3.53970027129086,0.517875767294343,2.3750742250372,1.04091196059682,4.26251669636998,3.68984795609694,2.86373017049983,3.76283862834255,1.38233250462643,0.247194967734374,0,0,0.161766849947409,0,0,0,16.9812862266697,7.12118803165747,0.510914110417183,0.599075622529601,0,0.254140454146129,74.2961571447921,33.3975440057597,52.9004822395159,38.9366477230699,27.105838477015,66.2843862144997,33.0972176658226,0.81471491080253,0.995255764880744,0.505445516867349,3.57751155007006,0.780722657776222,4.13823787980251,5.22180176435513,4.37043971723574,2.9255694635071,2.69038812598185,3.84177070694888,9.8307280880826,0,0.756424320671277,0.527853372491847,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0.702213187313235,0,0,1.24275463521301,0.469052119962192,1.62055855314913,2.13070262026689,1.18058539048442,0.925602677324269,0.697601834251224,0.804820204198858,0.467061369468678,0.329119699826961,0.32833492815819,0.648550476366846,1.16959989940266,0.878200461164203,0.671032093801859,23.5524742391823,29.1220053033375,0,1.32225283331772,0.853153002140936,1.16118335930219,0.77320476793256,0.80673409849337,1.11189021922435,1.33157938278791,0.474529061544512,1.64698954724011,0.754005626400808,0.596869416123452,1.55971269695296,0.898819408654221,1.08069024937347,0.398282546508734,0.189667900953082,1.02823661348756,2.25415471346161,1.4255592949172,0.775809948670503,1.05203729835478,0.442655759869801,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51031061316549,0.37898282354097,0,0.169745085775188,0,0,0,0.195133647857799,0,0.664394068946325,0.478364305972461,1.96635977658886,2.93564469172023,4.33947175744535,0,0,0,0,71.4450125445674,51.338718727385,0.819674726883377,0.252470927204373,4.41711507182759,4.29482618726302,3.66219776145758,1.43381278771531,1.11399337041197,0.566153061577665,2.83367491172426,2.92255857911312,4.34816555741176,24.7417413644791,2.83880170416537,0.712262414669021,0.488660878060728,16.9919226661712,1.32745138339963,2.6705869977048,0,1.50884063804718,2.65771703592696,3.3817866273832,0.516856586336442,3.27180356529755,2.13898427030833,0.632073515871632,0,0,28.2564872775644,3.42116078659489,5.04498866752743,4.50107773566344,7.27094957933322,8.20496560969525,12.5057255657612,30.1420299623453,3.98941903708308,0.42366414172764,0.661585194164886,0.16488625294148,0,0,0,0,0.582961673259701,66.196832817752,0.512612642393558,0.206386867963223,0,0,0.136694227721025,0.686334519619568,1.18984900995699,0.559805809294632,0.552799895217695,0.954670618015114,0.158167996790568,1.82987520414164,1.40406943068342,1.25452977608681,0.436725127492355,0.944050424693745,1.1571483801547,0.785267825952089,1.16653475962614,0,100.337343085786,0,0,0.194451188344048,0.387479470433193,1.01373675294467,0.234714477291508,0.5208175393758,0.734015410979976,11.3544536788223,66.5349314455669,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0.226730383615211,19.5347638969177,8.07424709485281,31.0586540273545,4.82973985080476,3.75364950902364,6.41030684935428,0.214368379079066,0.501572104035363,103.349587198923,105.874804396651,91.6632821503035,74.240574772473,51.3811889827982,55.1437545094481,56.7018900194717,49.08501115144,41.6891016265468,61.0957167867148,5.08558003162466,8.37952234142165,10.2440163452481,10.4535888339366,16.1402135223546,22.4289080309017,10.0011027510727,13.3922787205281,14.1204452220399,10.1078884705519,15.2087579934144,11.1289541417785,11.143339388916,11.4605022804716,12.4634967633681,10.9547548995107,12.5155072020444,9.45255180272155,7.00546031365621,12.5119082114238,12.343293085875,11.0034999818789,11.4449371174714,10.3195955808953,1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|phase1_expression=0.960893082628764,4.53668029931169,2.27499619694768,0,0,1.17515490338323,2.10251376535973,0.258246646883153,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,23.5569913718463,0,0,1.75991665072747,2.06468352960453,2.29692785646008,3.01533397311352,4.09395342103189,0.380046838912748,0.252030129759931,2.21730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.14024590558481,1.4192770370732,2.56965453026354,0.782391344348039,4.57852828398938,4.17403747195497,3.69416808241138,1.53985063787899,5.75010257459886,0,0,0,0,0,0,98.5281164386241,120.609943274023,114.723484034618,1.0165335962074,0.889294796111139,1.3498495759221,2.96659908770092,4.2628806896766,5.99200221036809,18.4424786554346,6.53244557543409,8.6403800532282,7.57169860864975,105.976515213811,128.324622292887,16.2912762955889,14.3768206527355,22.0612508786405,85.8903871795232,58.2254261668456,73.1167098299719,129.776107126511,115.091455651831,96.8898869235574,74.8210437323701,60.7783618834214,48.1314480496952,144.662635467571,112.331256150492,105.688485782945,1.8931548333296,0.68014404096107,0,0,0,0.539703191637817,0,0,5.47733238513832,2.38602451609281,2.33807404142582,2.82671659608272,1.12674735821344,0,0,0,0.216491041011214,0,0,3.53970027129086,0.517875767294343,2.3750742250372,1.04091196059682,4.26251669636998,3.68984795609694,2.86373017049983,3.76283862834255,1.38233250462643,0.247194967734374,0,0,0.161766849947409,0,0,0,16.9812862266697,7.12118803165747,0.510914110417183,0.599075622529601,0,0.254140454146129,74.2961571447921,33.3975440057597,52.9004822395159,38.9366477230699,27.105838477015,66.2843862144997,33.0972176658226,0.81471491080253,0.995255764880744,0.505445516867349,3.57751155007006,0.780722657776222,4.13823787980251,5.22180176435513,4.37043971723574,2.9255694635071,2.69038812598185,3.84177070694888,9.8307280880826,0,0.756424320671277,0.527853372491847,0.43839146485515,0,0,0.205782136407943,0.59710280045548,0.702213187313235,0,0,1.24275463521301,0.469052119962192,1.62055855314913,2.13070262026689,1.18058539048442,0.925602677324269,0.697601834251224,0.804820204198858,0.467061369468678,0.329119699826961,0.32833492815819,0.648550476366846,1.16959989940266,0.878200461164203,0.671032093801859,23.5524742391823,29.1220053033375,0,1.32225283331772,0.853153002140936,1.16118335930219,0.77320476793256,0.80673409849337,1.11189021922435,1.33157938278791,0.474529061544512,1.64698954724011,0.754005626400808,0.596869416123452,1.55971269695296,0.898819408654221,1.08069024937347,0.398282546508734,0.189667900953082,1.02823661348756,2.25415471346161,1.4255592949172,0.775809948670503,1.05203729835478,0.442655759869801,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51031061316549,0.37898282354097,0,0.169745085775188,0,0,0,0.195133647857799,0,0.664394068946325,0.478364305972461,1.96635977658886,2.93564469172023,4.33947175744535,0,0,0,0,71.4450125445674,51.338718727385,0.819674726883377,0.252470927204373,4.41711507182759,4.29482618726302,3.66219776145758,1.43381278771531,1.11399337041197,0.566153061577665,2.83367491172426,2.92255857911312,4.34816555741176,24.7417413644791,2.83880170416537,0.712262414669021,0.488660878060728,16.9919226661712,1.32745138339963,2.6705869977048,0,1.50884063804718,2.65771703592696,3.3817866273832,0.516856586336442,3.27180356529755,2.13898427030833,0.632073515871632,0,0,28.2564872775644,3.42116078659489,5.04498866752743,4.50107773566344,7.27094957933322,8.20496560969525,12.5057255657612,30.1420299623453,3.98941903708308,0.42366414172764,0.661585194164886,0.16488625294148,0,0,0,0,0.582961673259701,66.196832817752,0.512612642393558,0.206386867963223,0,0,0.136694227721025,0.686334519619568,1.18984900995699,0.559805809294632,0.552799895217695,0.954670618015114,0.158167996790568,1.82987520414164,1.40406943068342,1.25452977608681,0.436725127492355,0.944050424693745,1.1571483801547,0.785267825952089,1.16653475962614,0,100.337343085786,0,0,0.194451188344048,0.387479470433193,1.01373675294467,0.234714477291508,0.5208175393758,0.734015410979976,11.3544536788223,66.5349314455669,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0.226730383615211,19.5347638969177,8.07424709485281,31.0586540273545,4.82973985080476,3.75364950902364,6.41030684935428,0.214368379079066,0.501572104035363,103.349587198923,105.874804396651,91.6632821503035,74.240574772473,51.3811889827982,55.1437545094481,56.7018900194717,49.08501115144,41.6891016265468,61.0957167867148,5.08558003162466,8.37952234142165,10.2440163452481,10.4535888339366,16.1402135223546,22.4289080309017,10.0011027510727,13.3922787205281,14.1204452220399,10.1078884705519,15.2087579934144,11.1289541417785,11.143339388916,11.4605022804716,12.4634967633681,10.9547548995107,12.5155072020444,9.45255180272155,7.00546031365621,12.5119082114238,12.343293085875,11.0034999818789,11.4449371174714,10.3195955808953,1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|short_description=p1@AI836003
}}
}}

Latest revision as of 12:57, 1 October 2015

Short description:p1@AI836003
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_AI836003_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 10bp_to_ENSMUST00000031914, NM_177716, uc011zys.1_5end
EntrezGene:AI836003
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@AI836003

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C398.53
Mouse Granule cells, donor2.CNhs12357.11731-123E3120.61
Mouse Granule cells, donor3.CNhs12108.11636-122C7114.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1105.98
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5128.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D385.89
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F358.23
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D773.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4129.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4115.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D896.89
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E474.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E560.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6144.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6112.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1105.69
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A474.30
corpus striatum, adult.CNhs10487.19-21D833.40
corpus striatum, neonate N00.CNhs11226.630-43F152.90
cortex, adult.CNhs10473.12-14D538.94
cortex, neonate N30.CNhs11107.1392-42F227.11
diencephalon, adult.CNhs10482.20-12F266.28
diencephalon, neonate N30.CNhs11201.1388-42B233.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E823.55
hippocampus, neonate N00.CNhs11228.627-43G129.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C271.45
medulla oblongata, neonate N30.CNhs11200.1396-42A351.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I924.74
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G616.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G828.26
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F512.51
pituitary gland, neonate N00.CNhs11190.1308-22E930.14
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C966.20
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5100.34
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E266.53
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G531.06
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1103.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2105.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A391.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D774.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A451.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.09
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A841.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A961.10
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H210.24
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B116.14
whole body, embryo E16.CNhs10514.453-14F222.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I534.72
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.54e-1523
neuroblast (sensu Vertebrata)3.54e-1523
neuron1.26e-1233
neuronal stem cell1.26e-1233
neuroblast1.26e-1233
electrically signaling cell1.26e-1233
neural cell3.57e-1243
ectodermal cell5.47e-1244
neurectodermal cell5.47e-1244
electrically responsive cell3.03e-1039
electrically active cell3.03e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.12e-3073
nervous system1.11e-2975
regional part of nervous system6.71e-2854
neurectoderm1.06e-2664
neural plate1.06e-2664
presumptive neural plate1.06e-2664
neural tube2.16e-2652
neural rod2.16e-2652
future spinal cord2.16e-2652
neural keel2.16e-2652
ectoderm-derived structure6.46e-2395
ectoderm6.46e-2395
presumptive ectoderm6.46e-2395
brain3.75e-2247
future brain3.75e-2247
regional part of brain1.36e-2146
anterior neural tube2.11e-2040
gray matter2.96e-2034
ecto-epithelium3.51e-2073
pre-chordal neural plate3.69e-2049
regional part of forebrain1.10e-1939
forebrain1.10e-1939
future forebrain1.10e-1939
brain grey matter2.65e-1629
regional part of telencephalon2.65e-1629
telencephalon2.65e-1629
structure with developmental contribution from neural crest3.15e-1692
cerebral cortex5.33e-1121
cerebral hemisphere5.33e-1121
pallium5.33e-1121
regional part of cerebral cortex6.52e-1017
occipital lobe9.82e-0810
visual cortex9.82e-0810
neocortex9.82e-0810
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