FFCP PHASE1:Mm9::chr8:114535265..114535288,+: Difference between revisions
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{{FFCP|EntrezGene=57321|HGNC=|MCL_coexpression_id=1|UniProt=Q91VL8|association_with_transcript=6bp_to_ENSMUST00000052138,NM_020584,uc012gla.1_5end|description=CAGE_peak_2_at_Terf2ip_5end|id=chr8:114535265..114535288,+|ontology_enrichment_celltype=CL:0000117!2.78e-08!23;CL:0000337!2.78e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-08,23;CL:0000337,2.71e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.02e-18!63;UBERON:0000955!3.08e-16!50;UBERON:0006238!3.08e-16!50;UBERON:0002616!1.01e-15!49;UBERON:0001049!1.68e-15!52;UBERON:0005068!1.68e-15!52;UBERON:0006241!1.68e-15!52;UBERON:0007135!1.68e-15!52;UBERON:0004121!2.57e-15!102;UBERON:0000924!2.57e-15!102;UBERON:0006601!2.57e-15!102;UBERON:0002346!6.58e-15!71;UBERON:0003075!6.58e-15!71;UBERON:0007284!6.58e-15!71;UBERON:0001017!5.89e-14!73;UBERON:0005743!5.89e-14!73;UBERON:0003056!1.24e-13!49;UBERON:0000073!2.54e-13!75;UBERON:0001016!2.54e-13!75;UBERON:0002020!5.27e-13!34;UBERON:0003080!7.01e-13!40;UBERON:0004111!1.64e-12!122;UBERON:0002780!2.93e-12!39;UBERON:0001890!2.93e-12!39;UBERON:0006240!2.93e-12!39;UBERON:0002791!2.96e-12!29;UBERON:0003528!2.96e-12!29;UBERON:0001893!2.96e-12!29;UBERON:0007811!6.28e-12!86;UBERON:0000025!7.50e-11!114;UBERON:0000153!1.45e-10!94;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0000477!5.77e-08!154;UBERON:0002619!1.37e-07!17;UBERON:0000468!1.99e-07!333;UBERON:0000475!2.40e-07!200;UBERON:0000062!8.45e-07!269;UBERON:0000483!9.04e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-16,54;UBERON:0010371,6.46e-16,73;UBERON:0004121,1.48e-15,95;UBERON:0000924,1.48e-15,95;UBERON:0006601,1.48e-15,95;UBERON:0001049,1.60e-15,52;UBERON:0005068,1.60e-15,52;UBERON:0006241,1.60e-15,52;UBERON:0007135,1.60e-15,52;UBERON:0002346,1.83e-15,64;UBERON:0003075,1.83e-15,64;UBERON:0007284,1.83e-15,64;UBERON:0010314,1.50e-14,92;UBERON:0000955,2.05e-14,47;UBERON:0006238,2.05e-14,47;UBERON:0001017,4.76e-14,73;UBERON:0002616,6.49e-14,46;UBERON:0003056,1.19e-13,49;UBERON:0001016,2.07e-13,75;UBERON:0002020,5.06e-13,34;UBERON:0003080,6.74e-13,40;UBERON:0004111,1.76e-12,122;UBERON:0002780,2.82e-12,39;UBERON:0001890,2.82e-12,39;UBERON:0006240,2.82e-12,39;UBERON:0003528,2.85e-12,29;UBERON:0002791,2.85e-12,29;UBERON:0001893,2.85e-12,29;UBERON:0000025,8.06e-11,114;UBERON:0000956,1.23e-08,21;UBERON:0001869,1.23e-08,21;UBERON:0000203,1.23e-08,21;UBERON:0002619,1.34e-07,17|phase1_expression=4.96461426024861,2.44282785347553,1.36499771816861,1.20985684522732,2.00358291978539,1.6787927191189,0.700837921786577,2.45334314538995,0.422366166455,0.936258105287974,0.34243593645101,0.558405112967355,2.56801094896809,2.53519167015092,0.999329285446988,0.607425802169478,0,1.89277299214943,2.74228867211478,2.12194825899015,4.16712121740242,1.09220046320974,1.30599894569468,1.75991665072747,2.52350209173887,1.14846392823004,1.7230479846363,0.861884930743556,0.950117097281869,2.01624103807945,1.55211357458713,0.635030673459631,0.61506478758457,0,0.288851619751275,1.32987716286794,0.816677425049476,1.25559489221072,3.1253413780952,0.523523743973798,1.76469446409304,2.04913645487534,0.971020706062307,3.39921408534059,2.43304634926835,1.46837401729345,1.56478268869608,1.74420125104357,1.97717564461025,3.11087838518853,1.67983705950435,0,0.838913030288682,0.725362142011344,1.34437519656986,1.28629718017973,0.85960031981627,1.03134418455488,6.06949382578793,3.70293685490423,3.80298842103708,1.0165335962074,0.889294796111139,0.449949858640699,0.988866362566974,2.8419204597844,1.49800055259202,1.53687322128622,2.69592992002042,3.64516033495565,3.99617426567626,2.28520787523043,2.42955395046775,4.04219637409348,4.40889166683887,2.75765635983006,14.3150645299205,6.63974158042976,7.0659005297872,5.40733779693795,4.29991924931325,2.6045668527838,6.14202597803038,12.9435400307286,5.65353516774197,6.48182888042069,5.26775218956681,5.03278503728312,1.74170244666323,2.26714680320357,3.47837386442013,3.44169550792555,1.3599426674155,1.61910957491345,1.94932925234301,3.13618820968135,2.66844398250329,3.06774580640504,2.33807404142582,1.06001872353102,3.09855523508697,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,2.74041311325744,1.29468941823586,2.3750742250372,2.60227990149204,1.52232739156071,1.38369298353635,3.16517545160507,3.64524992120685,4.27266410520897,1.97755974187499,2.31358971071859,0,2.91180329905337,1.10420759230197,1.45462575940567,1.86391761218122,6.44117753425404,8.3778682725382,0.766371165625774,0.958520996047362,0.599902730993408,0.635351135365324,9.43681028250383,9.60751265919116,8.67015029578764,7.82209440865244,8.43861009190091,7.89594569326328,6.48965052271031,4.78645010096487,1.8661045591514,3.53811861807145,4.41927897361595,2.86264974517948,1.37941262660084,1.98068342785884,2.71268672104287,5.44291993210623,2.94661556655154,3.93547243150861,8.79591460512653,2.15567992932842,2.45837904218165,2.11141348996739,2.41115305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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57321 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VL8 | |||
|association_with_transcript=6bp_to_ENSMUST00000052138,NM_020584,uc012gla.1_5end | |||
|cluster_id=chr8:114535265..114535288,+ | |||
|description=CAGE_peak_2_at_Terf2ip_5end | |||
|id=chr8:114535265..114535288,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.78e-08!23;CL:0000337!2.78e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-08,23;CL:0000337,2.71e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.02e-18!63;UBERON:0000955!3.08e-16!50;UBERON:0006238!3.08e-16!50;UBERON:0002616!1.01e-15!49;UBERON:0001049!1.68e-15!52;UBERON:0005068!1.68e-15!52;UBERON:0006241!1.68e-15!52;UBERON:0007135!1.68e-15!52;UBERON:0004121!2.57e-15!102;UBERON:0000924!2.57e-15!102;UBERON:0006601!2.57e-15!102;UBERON:0002346!6.58e-15!71;UBERON:0003075!6.58e-15!71;UBERON:0007284!6.58e-15!71;UBERON:0001017!5.89e-14!73;UBERON:0005743!5.89e-14!73;UBERON:0003056!1.24e-13!49;UBERON:0000073!2.54e-13!75;UBERON:0001016!2.54e-13!75;UBERON:0002020!5.27e-13!34;UBERON:0003080!7.01e-13!40;UBERON:0004111!1.64e-12!122;UBERON:0002780!2.93e-12!39;UBERON:0001890!2.93e-12!39;UBERON:0006240!2.93e-12!39;UBERON:0002791!2.96e-12!29;UBERON:0003528!2.96e-12!29;UBERON:0001893!2.96e-12!29;UBERON:0007811!6.28e-12!86;UBERON:0000025!7.50e-11!114;UBERON:0000153!1.45e-10!94;UBERON:0000956!1.26e-08!21;UBERON:0001869!1.26e-08!21;UBERON:0000203!1.26e-08!21;UBERON:0000477!5.77e-08!154;UBERON:0002619!1.37e-07!17;UBERON:0000468!1.99e-07!333;UBERON:0000475!2.40e-07!200;UBERON:0000062!8.45e-07!269;UBERON:0000483!9.04e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-16,54;UBERON:0010371,6.46e-16,73;UBERON:0004121,1.48e-15,95;UBERON:0000924,1.48e-15,95;UBERON:0006601,1.48e-15,95;UBERON:0001049,1.60e-15,52;UBERON:0005068,1.60e-15,52;UBERON:0006241,1.60e-15,52;UBERON:0007135,1.60e-15,52;UBERON:0002346,1.83e-15,64;UBERON:0003075,1.83e-15,64;UBERON:0007284,1.83e-15,64;UBERON:0010314,1.50e-14,92;UBERON:0000955,2.05e-14,47;UBERON:0006238,2.05e-14,47;UBERON:0001017,4.76e-14,73;UBERON:0002616,6.49e-14,46;UBERON:0003056,1.19e-13,49;UBERON:0001016,2.07e-13,75;UBERON:0002020,5.06e-13,34;UBERON:0003080,6.74e-13,40;UBERON:0004111,1.76e-12,122;UBERON:0002780,2.82e-12,39;UBERON:0001890,2.82e-12,39;UBERON:0006240,2.82e-12,39;UBERON:0003528,2.85e-12,29;UBERON:0002791,2.85e-12,29;UBERON:0001893,2.85e-12,29;UBERON:0000025,8.06e-11,114;UBERON:0000956,1.23e-08,21;UBERON:0001869,1.23e-08,21;UBERON:0000203,1.23e-08,21;UBERON:0002619,1.34e-07,17 | |||
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| |||
|short_description=p2@Terf2ip | |||
}} |
Latest revision as of 13:15, 1 October 2015
Short description: | p2@Terf2ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Terf2ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 6bp_to_ENSMUST00000052138, NM_020584, uc012gla.1_5end |
EntrezGene: | Terf2ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.71e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.04e-16 | 54 |
ecto-epithelium | 6.46e-16 | 73 |
ectoderm-derived structure | 1.48e-15 | 95 |
ectoderm | 1.48e-15 | 95 |
presumptive ectoderm | 1.48e-15 | 95 |
neural tube | 1.60e-15 | 52 |
neural rod | 1.60e-15 | 52 |
future spinal cord | 1.60e-15 | 52 |
neural keel | 1.60e-15 | 52 |
neurectoderm | 1.83e-15 | 64 |
neural plate | 1.83e-15 | 64 |
presumptive neural plate | 1.83e-15 | 64 |
structure with developmental contribution from neural crest | 1.50e-14 | 92 |
brain | 2.05e-14 | 47 |
future brain | 2.05e-14 | 47 |
central nervous system | 4.76e-14 | 73 |
regional part of brain | 6.49e-14 | 46 |
pre-chordal neural plate | 1.19e-13 | 49 |
nervous system | 2.07e-13 | 75 |
gray matter | 5.06e-13 | 34 |
anterior neural tube | 6.74e-13 | 40 |
anatomical conduit | 1.76e-12 | 122 |
regional part of forebrain | 2.82e-12 | 39 |
forebrain | 2.82e-12 | 39 |
future forebrain | 2.82e-12 | 39 |
brain grey matter | 2.85e-12 | 29 |
regional part of telencephalon | 2.85e-12 | 29 |
telencephalon | 2.85e-12 | 29 |
tube | 8.06e-11 | 114 |
cerebral cortex | 1.23e-08 | 21 |
cerebral hemisphere | 1.23e-08 | 21 |
pallium | 1.23e-08 | 21 |
regional part of cerebral cortex | 1.34e-07 | 17 |