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FFCP PHASE1:Mm9::chr13:41345116..41345137,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108934
|EntrezGene=108934
|HGNC=
|HGNC=
|MCL_coexpression_id=208
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=E9Q942
|UniProt=E9Q942
|association_with_transcript=-75bp_to_NM_001135577,uc007qfc.2_5end
|association_with_transcript=-75bp_to_NM_001135577,uc007qfc.2_5end
|cluster_id=chr13:41345116..41345137,+
|description=CAGE_peak_5_at_BC024659_5end
|description=CAGE_peak_5_at_BC024659_5end
|id=chr13:41345116..41345137,+
|id=chr13:41345116..41345137,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.91e-10!52;UBERON:0005068!3.91e-10!52;UBERON:0006241!3.91e-10!52;UBERON:0007135!3.91e-10!52;UBERON:0002020!8.88e-10!34;UBERON:0000073!1.28e-09!75;UBERON:0001016!1.28e-09!75;UBERON:0001017!1.38e-09!73;UBERON:0005743!1.38e-09!73;UBERON:0004121!1.73e-09!102;UBERON:0000924!1.73e-09!102;UBERON:0006601!1.73e-09!102;UBERON:0000955!1.79e-09!50;UBERON:0006238!1.79e-09!50;UBERON:0002616!5.05e-09!49;UBERON:0000033!2.67e-08!63;UBERON:0002346!2.91e-08!71;UBERON:0003075!2.91e-08!71;UBERON:0007284!2.91e-08!71;UBERON:0002791!1.52e-07!29;UBERON:0003528!1.52e-07!29;UBERON:0001893!1.52e-07!29;UBERON:0002021!2.86e-07!10;UBERON:0000411!2.86e-07!10;UBERON:0001950!2.86e-07!10
|ontology_enrichment_uberon=UBERON:0001049!3.91e-10!52;UBERON:0005068!3.91e-10!52;UBERON:0006241!3.91e-10!52;UBERON:0007135!3.91e-10!52;UBERON:0002020!8.88e-10!34;UBERON:0000073!1.28e-09!75;UBERON:0001016!1.28e-09!75;UBERON:0001017!1.38e-09!73;UBERON:0005743!1.38e-09!73;UBERON:0004121!1.73e-09!102;UBERON:0000924!1.73e-09!102;UBERON:0006601!1.73e-09!102;UBERON:0000955!1.79e-09!50;UBERON:0006238!1.79e-09!50;UBERON:0002616!5.05e-09!49;UBERON:0000033!2.67e-08!63;UBERON:0002346!2.91e-08!71;UBERON:0003075!2.91e-08!71;UBERON:0007284!2.91e-08!71;UBERON:0002791!1.52e-07!29;UBERON:0003528!1.52e-07!29;UBERON:0001893!1.52e-07!29;UBERON:0002021!2.86e-07!10;UBERON:0000411!2.86e-07!10;UBERON:0001950!2.86e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.26e-24,54;UBERON:0001049,1.56e-21,52;UBERON:0005068,1.56e-21,52;UBERON:0006241,1.56e-21,52;UBERON:0007135,1.56e-21,52;UBERON:0001017,4.94e-20,73;UBERON:0001016,2.91e-19,75;UBERON:0002346,2.17e-17,64;UBERON:0003075,2.17e-17,64;UBERON:0007284,2.17e-17,64;UBERON:0000955,2.69e-17,47;UBERON:0006238,2.69e-17,47;UBERON:0002021,1.05e-16,10;UBERON:0000411,1.05e-16,10;UBERON:0001950,1.05e-16,10;UBERON:0002020,1.50e-16,34;UBERON:0002616,3.32e-16,46;UBERON:0004121,2.10e-14,95;UBERON:0000924,2.10e-14,95;UBERON:0006601,2.10e-14,95;UBERON:0010371,2.79e-14,73;UBERON:0003528,1.14e-12,29;UBERON:0002791,1.14e-12,29;UBERON:0001893,1.14e-12,29;UBERON:0003080,4.05e-12,40;UBERON:0003076,2.00e-11,12;UBERON:0003057,2.00e-11,12;UBERON:0002780,4.79e-11,39;UBERON:0001890,4.79e-11,39;UBERON:0006240,4.79e-11,39;UBERON:0002619,8.49e-11,17;UBERON:0010314,1.34e-10,92;UBERON:0003056,4.44e-10,49;UBERON:0000956,4.77e-10,21;UBERON:0001869,4.77e-10,21;UBERON:0000203,4.77e-10,21;UBERON:0000025,1.60e-08,114;UBERON:0002950,4.08e-08,4;UBERON:0001891,4.08e-08,4;UBERON:0009616,4.08e-08,4;UBERON:0010286,4.08e-08,4;UBERON:0004111,1.89e-07,122;UBERON:0002240,3.67e-07,6;UBERON:0005174,3.67e-07,6;UBERON:0001137,3.67e-07,6
|phase1_expression=0.320297694209588,2.09385244583617,0,0,1.00179145989269,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,2.21112554392781,0,0,0.159992422793407,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,0,0,0.514518872071894,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.933206510776299,0.675029691658453,0.210324961351382,2.57085885963423,2.42955395046775,0.122490799214954,0.479227355091182,0,6.60695285996332,3.83062014255563,2.91852413186863,0.263772575460388,0.457438218012048,0,3.35019598801657,4.50210088025344,3.36156145108982,1.47314292736834,1.13897344639282,0.745597783301202,0.227178579999552,0.377857800533928,0.289864488701678,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.323533699894818,1.10420759230197,0,0,4.39171195517321,4.60782754989601,0.255457055208591,0.239630249011841,0,0.254140454146129,3.2953940669061,3.20250421973039,0.251308704225729,3.47648640384553,1.53429274398198,3.94797284663164,1.94689515681309,0.203678727700633,0.248813941220186,0.505445516867349,0.841767423545896,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.512454881139399,0.281105173679186,1.29351685369508,0,0.756424320671277,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,1.05389452409612,0.292399974850665,0.658650345873152,0.402619256281115,2.3131894342054,0.92614151141356,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.420814919341911,0.379419222745544,0,0.31399745568275,0,0.592905254174298,0.166845105716094,0,0.224862112384854,0.608580364165509,0,0,0,0.324270453550071,0,1.43768206527355,0,0.624075346229121,0.757736633841335,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.502518772325447,0,0.195133647857799,0.630540576424764,0,0.478364305972461,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.551873492609465,5.45872005958493,4.68846746368813,0.327869890753351,0.504941854408746,0,0,0.430846795465598,0,0.222798674082394,0,0,1.16902343164525,0.790575555893047,1.92792789853084,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.422190474497091,0.596861720015682,0.656563598980245,0.291480836629851,5.7481843623258,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.552799895217695,0,0,0,0.540026704109006,0,0,0.269728692769641,0.661227645802687,0.523511883968059,0,0,9.01908701894705,0,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.314578033277133,4.1069300540421,4.03242008761012,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0.857473516316263,0,3.3885110557024,2.76195141904306,1.14579102687879,4.46818274093588,3.42541259885321,3.0215755895588,3.37511250115903,1.80128481289688,2.71885445390523,3.10656187051092,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,1.01391719956096,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.952587382566147,0,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.644613162144895,1.3390183244819,0,0
|phase1_expression=0.320297694209588,2.09385244583617,0,0,1.00179145989269,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,2.21112554392781,0,0,0.159992422793407,0.45881856213434,1.14846392823004,0.430761996159075,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0,1.17646297606203,0.683045484958446,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,0,0,0.514518872071894,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.933206510776299,0.675029691658453,0.210324961351382,2.57085885963423,2.42955395046775,0.122490799214954,0.479227355091182,0,6.60695285996332,3.83062014255563,2.91852413186863,0.263772575460388,0.457438218012048,0,3.35019598801657,4.50210088025344,3.36156145108982,1.47314292736834,1.13897344639282,0.745597783301202,0.227178579999552,0.377857800533928,0.289864488701678,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.323533699894818,1.10420759230197,0,0,4.39171195517321,4.60782754989601,0.255457055208591,0.239630249011841,0,0.254140454146129,3.2953940669061,3.20250421973039,0.251308704225729,3.47648640384553,1.53429274398198,3.94797284663164,1.94689515681309,0.203678727700633,0.248813941220186,0.505445516867349,0.841767423545896,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.512454881139399,0.281105173679186,1.29351685369508,0,0.756424320671277,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,1.05389452409612,0.292399974850665,0.658650345873152,0.402619256281115,2.3131894342054,0.92614151141356,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.193952487167626,0.420814919341911,0.379419222745544,0,0.31399745568275,0,0.592905254174298,0.166845105716094,0,0.224862112384854,0.608580364165509,0,0,0,0.324270453550071,0,1.43768206527355,0,0.624075346229121,0.757736633841335,0,0.482443521363367,0.554259570499814,0,0.325929952884052,0.339490171550376,0,0.502518772325447,0,0.195133647857799,0.630540576424764,0,0.478364305972461,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.551873492609465,5.45872005958493,4.68846746368813,0.327869890753351,0.504941854408746,0,0,0.430846795465598,0,0.222798674082394,0,0,1.16902343164525,0.790575555893047,1.92792789853084,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.422190474497091,0.596861720015682,0.656563598980245,0.291480836629851,5.7481843623258,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.552799895217695,0,0,0,0.540026704109006,0,0,0.269728692769641,0.661227645802687,0.523511883968059,0,0,9.01908701894705,0,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0.314578033277133,4.1069300540421,4.03242008761012,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0.857473516316263,0,3.3885110557024,2.76195141904306,1.14579102687879,4.46818274093588,3.42541259885321,3.0215755895588,3.37511250115903,1.80128481289688,2.71885445390523,3.10656187051092,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,1.01391719956096,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0.952587382566147,0,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.644613162144895,1.3390183244819,0,0
|short_description=p5@BC024659
|short_description=p5@BC024659
}}
}}

Latest revision as of 14:36, 1 October 2015

Short description:p5@BC024659
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_BC024659_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: -75bp_to_NM_001135577, uc007qfc.2_5end
EntrezGene:BC024659
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@BC024659

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.26e-2454
neural tube1.56e-2152
neural rod1.56e-2152
future spinal cord1.56e-2152
neural keel1.56e-2152
central nervous system4.94e-2073
nervous system2.91e-1975
neurectoderm2.17e-1764
neural plate2.17e-1764
presumptive neural plate2.17e-1764
brain2.69e-1747
future brain2.69e-1747
occipital lobe1.05e-1610
visual cortex1.05e-1610
neocortex1.05e-1610
gray matter1.50e-1634
regional part of brain3.32e-1646
ectoderm-derived structure2.10e-1495
ectoderm2.10e-1495
presumptive ectoderm2.10e-1495
ecto-epithelium2.79e-1473
brain grey matter1.14e-1229
regional part of telencephalon1.14e-1229
telencephalon1.14e-1229
anterior neural tube4.05e-1240
posterior neural tube2.00e-1112
chordal neural plate2.00e-1112
regional part of forebrain4.79e-1139
forebrain4.79e-1139
future forebrain4.79e-1139
regional part of cerebral cortex8.49e-1117
structure with developmental contribution from neural crest1.34e-1092
pre-chordal neural plate4.44e-1049
cerebral cortex4.77e-1021
cerebral hemisphere4.77e-1021
pallium4.77e-1021
tube1.60e-08114
regional part of midbrain4.08e-084
midbrain4.08e-084
presumptive midbrain4.08e-084
midbrain neural tube4.08e-084
anatomical conduit1.89e-07122
spinal cord3.67e-076
dorsal region element3.67e-076
dorsum3.67e-076
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