FFCP PHASE1:Mm9::chr8:125778069..125778097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72325 | |EntrezGene=72325 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3U280,Q8C190,D6RGB6 | |UniProt=Q3U280,Q8C190,D6RGB6 | ||
|association_with_transcript=0bp_to_ENSMUST00000117643,NM_028200,uc009nus.2,uc009nut.2,uc009nuu.2,uc009nuv.2,uc009nuw.2,uc009nux.2,uc009nuz.2_5end | |association_with_transcript=0bp_to_ENSMUST00000117643,NM_028200,uc009nus.2,uc009nut.2,uc009nuu.2,uc009nuv.2,uc009nuw.2,uc009nux.2,uc009nuz.2_5end | ||
|cluster_id=chr8:125778069..125778097,- | |||
|description=CAGE_peak_2_at_1300018I17Rik_5end | |description=CAGE_peak_2_at_1300018I17Rik_5end | ||
|id=chr8:125778069..125778097,- | |id=chr8:125778069..125778097,- | ||
|ontology_enrichment_celltype=CL:0000540!8.14e-08!33;CL:0000047!8.14e-08!33;CL:0000031!8.14e-08!33;CL:0000404!8.14e-08!33;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23 | |ontology_enrichment_celltype=CL:0000540!8.14e-08!33;CL:0000047!8.14e-08!33;CL:0000031!8.14e-08!33;CL:0000404!8.14e-08!33;CL:0000117!1.06e-07!23;CL:0000337!1.06e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.68e-08,33;CL:0000047,6.68e-08,33;CL:0000031,6.68e-08,33;CL:0000404,6.68e-08,33;CL:0000117,6.86e-08,23;CL:0000337,6.86e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.90e-17!73;UBERON:0005743!2.90e-17!73;UBERON:0000153!5.56e-17!94;UBERON:0001049!8.11e-17!52;UBERON:0005068!8.11e-17!52;UBERON:0006241!8.11e-17!52;UBERON:0007135!8.11e-17!52;UBERON:0007811!2.73e-16!86;UBERON:0000073!2.80e-16!75;UBERON:0001016!2.80e-16!75;UBERON:0000033!2.73e-15!63;UBERON:0000955!3.55e-15!50;UBERON:0006238!3.55e-15!50;UBERON:0003056!4.21e-15!49;UBERON:0004121!5.31e-15!102;UBERON:0000924!5.31e-15!102;UBERON:0006601!5.31e-15!102;UBERON:0002346!9.19e-15!71;UBERON:0003075!9.19e-15!71;UBERON:0007284!9.19e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0003080!2.14e-14!40;UBERON:0002780!5.01e-14!39;UBERON:0001890!5.01e-14!39;UBERON:0006240!5.01e-14!39;UBERON:0002020!2.73e-13!34;UBERON:0002791!4.18e-12!29;UBERON:0003528!4.18e-12!29;UBERON:0001893!4.18e-12!29;UBERON:0000956!7.00e-10!21;UBERON:0001869!7.00e-10!21;UBERON:0000203!7.00e-10!21;UBERON:0002619!8.41e-08!17;UBERON:0002021!5.16e-07!10;UBERON:0000411!5.16e-07!10;UBERON:0001950!5.16e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.90e-17!73;UBERON:0005743!2.90e-17!73;UBERON:0000153!5.56e-17!94;UBERON:0001049!8.11e-17!52;UBERON:0005068!8.11e-17!52;UBERON:0006241!8.11e-17!52;UBERON:0007135!8.11e-17!52;UBERON:0007811!2.73e-16!86;UBERON:0000073!2.80e-16!75;UBERON:0001016!2.80e-16!75;UBERON:0000033!2.73e-15!63;UBERON:0000955!3.55e-15!50;UBERON:0006238!3.55e-15!50;UBERON:0003056!4.21e-15!49;UBERON:0004121!5.31e-15!102;UBERON:0000924!5.31e-15!102;UBERON:0006601!5.31e-15!102;UBERON:0002346!9.19e-15!71;UBERON:0003075!9.19e-15!71;UBERON:0007284!9.19e-15!71;UBERON:0002616!1.61e-14!49;UBERON:0003080!2.14e-14!40;UBERON:0002780!5.01e-14!39;UBERON:0001890!5.01e-14!39;UBERON:0006240!5.01e-14!39;UBERON:0002020!2.73e-13!34;UBERON:0002791!4.18e-12!29;UBERON:0003528!4.18e-12!29;UBERON:0001893!4.18e-12!29;UBERON:0000956!7.00e-10!21;UBERON:0001869!7.00e-10!21;UBERON:0000203!7.00e-10!21;UBERON:0002619!8.41e-08!17;UBERON:0002021!5.16e-07!10;UBERON:0000411!5.16e-07!10;UBERON:0001950!5.16e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.67e-17,73;UBERON:0002346,3.44e-17,64;UBERON:0003075,3.44e-17,64;UBERON:0007284,3.44e-17,64;UBERON:0001017,4.21e-17,73;UBERON:0004121,1.09e-16,95;UBERON:0000924,1.09e-16,95;UBERON:0006601,1.09e-16,95;UBERON:0001049,1.21e-16,52;UBERON:0005068,1.21e-16,52;UBERON:0006241,1.21e-16,52;UBERON:0007135,1.21e-16,52;UBERON:0001016,4.02e-16,75;UBERON:0000073,7.56e-16,54;UBERON:0000955,9.38e-16,47;UBERON:0006238,9.38e-16,47;UBERON:0002616,4.45e-15,46;UBERON:0003056,6.36e-15,49;UBERON:0003080,3.43e-14,40;UBERON:0002780,8.05e-14,39;UBERON:0001890,8.05e-14,39;UBERON:0006240,8.05e-14,39;UBERON:0002020,3.42e-13,34;UBERON:0003528,5.40e-12,29;UBERON:0002791,5.40e-12,29;UBERON:0001893,5.40e-12,29;UBERON:0010314,1.02e-10,92;UBERON:0000956,9.61e-10,21;UBERON:0001869,9.61e-10,21;UBERON:0000203,9.61e-10,21;UBERON:0002619,1.18e-07,17;UBERON:0002021,4.64e-07,10;UBERON:0000411,4.64e-07,10;UBERON:0001950,4.64e-07,10 | |||
|phase1_expression=1.92178616525753,1.74487703819681,1.81999695755814,0.90739263392049,2.50447864973174,1.34303417529512,1.40167584357315,4.00282302668886,0.422366166455,0.70219357896598,3.5955773327356,2.95156988282745,2.39681021903688,4.45844052336887,1.33243904726265,0.607425802169478,0,3.62781490161973,1.7824876368746,2.12194825899015,3.14660173558958,1.48936426801328,1.30599894569468,0.47997726838022,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0.816677425049476,1.67412652294763,2.3440060335714,0,2.35292595212406,0.683045484958446,2.42755176515577,0.503587271902309,1.31790010585369,0.917733760808408,1.56478268869608,1.52617609466313,1.09843091367236,0.972149495371417,0.699932108126813,1.43752564364972,2.85230430298152,0,2.35265659399725,0.257259436035947,1.71920063963254,0,6.47412674750713,6.87688273053643,4.43681982454325,2.03306719241479,2.66788438833342,1.7997994345628,1.97773272513395,4.2628806896766,2.39680088414724,1.53687322128622,6.11768712620018,4.59020190327748,3.78584930432488,2.85650984403804,2.65042249141936,5.26710436624302,5.55903731905771,7.35375029288017,0,2.55374676170375,2.91852413186863,7.12185953743047,5.48925861614458,5.73004707612436,4.4669279840221,1.12552522006336,2.59757021220577,5.30331453852602,2.27794689278565,4.10078780815661,1.4387976733305,1.20914496170857,2.31891590961342,0.860423876981386,0,3.2382191498269,0.649776417447669,0.896053774194671,2.10666630197628,1.02258193546835,0,0.70667914902068,2.53518155598025,0,0,0,0.865964164044856,0,0,0.79928715803342,5.17875767294343,1.48442139064825,2.77576522825817,0.913396434936424,1.61430848079241,0.753613202763113,1.76383060703557,1.50799909595611,0.741584903203122,0.578397427679647,2.65383165584962,1.45590164952668,1.32504911076236,0.484875253135222,1.86391761218122,4.09893115816166,6.49284791121711,1.02182822083437,1.1981512450592,0.599902730993408,1.39777249780371,3.44518470631092,2.74500361691176,10.0523481690292,6.95297280769106,6.64860189058859,3.32460871295296,6.00292673350703,3.25885964321012,1.7416975885413,3.0326731012041,1.26265113531884,3.12289063110489,1.83921683546778,1.62055916824814,4.9732589885786,5.44291993210623,2.8185018462667,3.93547243150861,2.58703370739016,2.15567992932842,3.78212160335639,3.16712023495108,1.31517439456545,2.50242524303038,2.43776516565517,1.4404749548556,2.9855140022774,0,2.57347907114715,1.70498099637356,1.44988040774851,1.64168241986767,1.80062061461015,1.65721314909647,1.96764231747404,2.1597395804233,0.697601834251224,1.60964040839772,2.6856028744449,1.48103864922132,1.80584210487005,2.1888578577381,2.48539978623065,2.41505126820156,2.14730270016595,4.6263788684108,7.71784592844633,0.660837565967596,0,4.05247676016945,1.85789337488351,2.19074684247559,1.21010114774006,2.44615848229357,1.14135375667535,1.42358718463353,1.31759163779209,1.50801125280162,0.994782360205754,0.38992817423824,0,1.51296634912286,1.59313018603494,1.51734320762465,2.74196430263349,1.1270773567308,2.8511185898344,2.52138233317913,2.24434623649019,2.65593455921881,1.62371162777562,1.56998727841375,1.85095745882701,2.66807364378434,0.83422552858047,0.393117990226406,0.674586337154561,0.811440485554012,0.241177159752417,1.01850340712568,0.575392274901621,0.648540907100142,1.09824565275233,5.75072826109418,1.48856379067401,0.624075346229121,1.01031551178845,1.25578189465339,2.41221760681684,1.47802552133284,1.70542270593436,1.79261474086228,1.52770577197669,1.87752198630802,2.01007508930179,1.42826184531608,2.14647012643579,2.83743259391144,3.10050565508285,2.39182152986231,2.13022309130459,2.93564469172023,3.03763023021174,4.52373851817817,2.17562273527484,1.47529281905711,2.20749397043786,3.37156238974363,3.8679856575427,0.655739781506702,2.27223834483936,4.10160685241134,1.56175497718655,1.50796378412959,2.62865677747807,2.89638276307112,3.67999490025482,0.809621403349789,3.21481443702443,5.13874111330481,8.9969968598106,1.41940085208269,2.67098405500883,3.09485222771795,1.81467135269789,0,1.45668381692989,1.81394134178851,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,1.45413491791002,1.06949213515416,0,2.10837217149998,1.03135543248187,2.7235168460303,3.42116078659489,5.30370603509293,3.42939256050548,2.30542303734956,2.67553226403106,0.822745103010605,4.56697423671899,0.469343416127421,2.1183207086382,0.441056796109924,3.46261131177108,2.09903754704677,2.83470747162333,3.22305328808468,1.80554989719567,0.291480836629851,2.78137953015765,2.56306321196779,1.857481811669,0.925972636848558,1.31857919903284,1.6403307326523,2.28778173206523,1.86976272993241,2.37917468950219,2.9021994498929,0.954670618015114,1.89801596148681,2.84647253977588,1.62008011232702,1.67270636811575,1.31017538247707,0.809186078308924,1.40510874733071,1.04702376793612,1.03691978633434,1.86401793926078,2.81846469342095,2.24274819065968,2.64733584731356,3.69457257853691,2.0665571756437,2.19642963138012,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|phase1_expression=1.92178616525753,1.74487703819681,1.81999695755814,0.90739263392049,2.50447864973174,1.34303417529512,1.40167584357315,4.00282302668886,0.422366166455,0.70219357896598,3.5955773327356,2.95156988282745,2.39681021903688,4.45844052336887,1.33243904726265,0.607425802169478,0,3.62781490161973,1.7824876368746,2.12194825899015,3.14660173558958,1.48936426801328,1.30599894569468,0.47997726838022,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0.816677425049476,1.67412652294763,2.3440060335714,0,2.35292595212406,0.683045484958446,2.42755176515577,0.503587271902309,1.31790010585369,0.917733760808408,1.56478268869608,1.52617609466313,1.09843091367236,0.972149495371417,0.699932108126813,1.43752564364972,2.85230430298152,0,2.35265659399725,0.257259436035947,1.71920063963254,0,6.47412674750713,6.87688273053643,4.43681982454325,2.03306719241479,2.66788438833342,1.7997994345628,1.97773272513395,4.2628806896766,2.39680088414724,1.53687322128622,6.11768712620018,4.59020190327748,3.78584930432488,2.85650984403804,2.65042249141936,5.26710436624302,5.55903731905771,7.35375029288017,0,2.55374676170375,2.91852413186863,7.12185953743047,5.48925861614458,5.73004707612436,4.4669279840221,1.12552522006336,2.59757021220577,5.30331453852602,2.27794689278565,4.10078780815661,1.4387976733305,1.20914496170857,2.31891590961342,0.860423876981386,0,3.2382191498269,0.649776417447669,0.896053774194671,2.10666630197628,1.02258193546835,0,0.70667914902068,2.53518155598025,0,0,0,0.865964164044856,0,0,0.79928715803342,5.17875767294343,1.48442139064825,2.77576522825817,0.913396434936424,1.61430848079241,0.753613202763113,1.76383060703557,1.50799909595611,0.741584903203122,0.578397427679647,2.65383165584962,1.45590164952668,1.32504911076236,0.484875253135222,1.86391761218122,4.09893115816166,6.49284791121711,1.02182822083437,1.1981512450592,0.599902730993408,1.39777249780371,3.44518470631092,2.74500361691176,10.0523481690292,6.95297280769106,6.64860189058859,3.32460871295296,6.00292673350703,3.25885964321012,1.7416975885413,3.0326731012041,1.26265113531884,3.12289063110489,1.83921683546778,1.62055916824814,4.9732589885786,5.44291993210623,2.8185018462667,3.93547243150861,2.58703370739016,2.15567992932842,3.78212160335639,3.16712023495108,1.31517439456545,2.50242524303038,2.43776516565517,1.4404749548556,2.9855140022774,0,2.57347907114715,1.70498099637356,1.44988040774851,1.64168241986767,1.80062061461015,1.65721314909647,1.96764231747404,2.1597395804233,0.697601834251224,1.60964040839772,2.6856028744449,1.48103864922132,1.80584210487005,2.1888578577381,2.48539978623065,2.41505126820156,2.14730270016595,4.6263788684108,7.71784592844633,0.660837565967596,0,4.05247676016945,1.85789337488351,2.19074684247559,1.21010114774006,2.44615848229357,1.14135375667535,1.42358718463353,1.31759163779209,1.50801125280162,0.994782360205754,0.38992817423824,0,1.51296634912286,1.59313018603494,1.51734320762465,2.74196430263349,1.1270773567308,2.8511185898344,2.52138233317913,2.24434623649019,2.65593455921881,1.62371162777562,1.56998727841375,1.85095745882701,2.66807364378434,0.83422552858047,0.393117990226406,0.674586337154561,0.811440485554012,0.241177159752417,1.01850340712568,0.575392274901621,0.648540907100142,1.09824565275233,5.75072826109418,1.48856379067401,0.624075346229121,1.01031551178845,1.25578189465339,2.41221760681684,1.47802552133284,1.70542270593436,1.79261474086228,1.52770577197669,1.87752198630802,2.01007508930179,1.42826184531608,2.14647012643579,2.83743259391144,3.10050565508285,2.39182152986231,2.13022309130459,2.93564469172023,3.03763023021174,4.52373851817817,2.17562273527484,1.47529281905711,2.20749397043786,3.37156238974363,3.8679856575427,0.655739781506702,2.27223834483936,4.10160685241134,1.56175497718655,1.50796378412959,2.62865677747807,2.89638276307112,3.67999490025482,0.809621403349789,3.21481443702443,5.13874111330481,8.9969968598106,1.41940085208269,2.67098405500883,3.09485222771795,1.81467135269789,0,1.45668381692989,1.81394134178851,1.32023555829129,0.295301892880773,1.22974059177571,1.80899805217755,1.45413491791002,1.06949213515416,0,2.10837217149998,1.03135543248187,2.7235168460303,3.42116078659489,5.30370603509293,3.42939256050548,2.30542303734956,2.67553226403106,0.822745103010605,4.56697423671899,0.469343416127421,2.1183207086382,0.441056796109924,3.46261131177108,2.09903754704677,2.83470747162333,3.22305328808468,1.80554989719567,0.291480836629851,2.78137953015765,2.56306321196779,1.857481811669,0.925972636848558,1.31857919903284,1.6403307326523,2.28778173206523,1.86976272993241,2.37917468950219,2.9021994498929,0.954670618015114,1.89801596148681,2.84647253977588,1.62008011232702,1.67270636811575,1.31017538247707,0.809186078308924,1.40510874733071,1.04702376793612,1.03691978633434,1.86401793926078,2.81846469342095,2.24274819065968,2.64733584731356,3.69457257853691,2.0665571756437,2.19642963138012,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| ||
|short_description=p2@1300018I17Rik | |short_description=p2@1300018I17Rik | ||
}} | }} |
Latest revision as of 16:46, 1 October 2015
Short description: | p2@1300018I17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1300018I17Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000117643, NM_028200, uc009nus.2, uc009nut.2, uc009nuu.2, uc009nuv.2, uc009nuw.2, uc009nux.2, uc009nuz.2_5end |
EntrezGene: | 1300018I17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.68e-08 | 33 |
neuronal stem cell | 6.68e-08 | 33 |
neuroblast | 6.68e-08 | 33 |
electrically signaling cell | 6.68e-08 | 33 |
CNS neuron (sensu Vertebrata) | 6.86e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.86e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.67e-17 | 73 |
neurectoderm | 3.44e-17 | 64 |
neural plate | 3.44e-17 | 64 |
presumptive neural plate | 3.44e-17 | 64 |
central nervous system | 4.21e-17 | 73 |
ectoderm-derived structure | 1.09e-16 | 95 |
ectoderm | 1.09e-16 | 95 |
presumptive ectoderm | 1.09e-16 | 95 |
neural tube | 1.21e-16 | 52 |
neural rod | 1.21e-16 | 52 |
future spinal cord | 1.21e-16 | 52 |
neural keel | 1.21e-16 | 52 |
nervous system | 4.02e-16 | 75 |
regional part of nervous system | 7.56e-16 | 54 |
brain | 9.38e-16 | 47 |
future brain | 9.38e-16 | 47 |
regional part of brain | 4.45e-15 | 46 |
pre-chordal neural plate | 6.36e-15 | 49 |
anterior neural tube | 3.43e-14 | 40 |
regional part of forebrain | 8.05e-14 | 39 |
forebrain | 8.05e-14 | 39 |
future forebrain | 8.05e-14 | 39 |
gray matter | 3.42e-13 | 34 |
brain grey matter | 5.40e-12 | 29 |
regional part of telencephalon | 5.40e-12 | 29 |
telencephalon | 5.40e-12 | 29 |
structure with developmental contribution from neural crest | 1.02e-10 | 92 |
cerebral cortex | 9.61e-10 | 21 |
cerebral hemisphere | 9.61e-10 | 21 |
pallium | 9.61e-10 | 21 |
regional part of cerebral cortex | 1.18e-07 | 17 |
occipital lobe | 4.64e-07 | 10 |
visual cortex | 4.64e-07 | 10 |
neocortex | 4.64e-07 | 10 |