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FFCP PHASE1:Mm9::chrX:149574484..149574554,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:149574484..149574554,+
|DHSsupport=NA
|short_description=p1@Rragb
|DPIdataset=NA
|description=CAGE_peak_1_at_Rragb_5end
|association_with_transcript=0bp_to_ENSMUST00000039720,ENSMUST00000144175,NM_001004154,uc012hqx.1_5end
|EntrezGene=245670
|EntrezGene=245670
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6NTA4,G3UYP1
|UniProt=Q6NTA4,G3UYP1
|association_with_transcript=0bp_to_ENSMUST00000039720,ENSMUST00000144175,NM_001004154,uc012hqx.1_5end
|cluster_id=chrX:149574484..149574554,+
|description=CAGE_peak_1_at_Rragb_5end
|id=chrX:149574484..149574554,+
|ontology_enrichment_celltype=CL:0000540!4.46e-17!33;CL:0000047!4.46e-17!33;CL:0000031!4.46e-17!33;CL:0000404!4.46e-17!33;CL:0000393!3.66e-15!39;CL:0000211!3.66e-15!39;CL:0000117!2.44e-13!23;CL:0000337!2.44e-13!23;CL:0000221!3.02e-13!44;CL:0000133!3.02e-13!44;CL:0002319!6.00e-13!43;CL:0000055!4.54e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0000117,9.60e-14,23;CL:0000337,9.60e-14,23;CL:0000221,3.52e-13,44;CL:0000133,3.52e-13,44;CL:0002319,7.15e-13,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.92e-33!73;UBERON:0005743!1.92e-33!73;UBERON:0000073!8.72e-32!75;UBERON:0001016!8.72e-32!75;UBERON:0002346!1.31e-28!71;UBERON:0003075!1.31e-28!71;UBERON:0007284!1.31e-28!71;UBERON:0000033!1.18e-26!63;UBERON:0001049!8.29e-26!52;UBERON:0005068!8.29e-26!52;UBERON:0006241!8.29e-26!52;UBERON:0007135!8.29e-26!52;UBERON:0004121!1.03e-25!102;UBERON:0000924!1.03e-25!102;UBERON:0006601!1.03e-25!102;UBERON:0000955!1.81e-24!50;UBERON:0006238!1.81e-24!50;UBERON:0002616!6.67e-24!49;UBERON:0003056!3.67e-23!49;UBERON:0003080!2.56e-20!40;UBERON:0002780!1.31e-19!39;UBERON:0001890!1.31e-19!39;UBERON:0006240!1.31e-19!39;UBERON:0002020!3.33e-18!34;UBERON:0002791!5.54e-15!29;UBERON:0003528!5.54e-15!29;UBERON:0001893!5.54e-15!29;UBERON:0000153!1.37e-13!94;UBERON:0007811!1.74e-13!86;UBERON:0000956!2.13e-10!21;UBERON:0001869!2.13e-10!21;UBERON:0000203!2.13e-10!21;UBERON:0002619!6.10e-09!17;UBERON:0002021!3.95e-07!10;UBERON:0000411!3.95e-07!10;UBERON:0001950!3.95e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-34,73;UBERON:0001016,3.18e-32,75;UBERON:0002346,1.14e-31,64;UBERON:0003075,1.14e-31,64;UBERON:0007284,1.14e-31,64;UBERON:0000073,1.48e-28,54;UBERON:0004121,1.33e-27,95;UBERON:0000924,1.33e-27,95;UBERON:0006601,1.33e-27,95;UBERON:0001049,6.69e-27,52;UBERON:0005068,6.69e-27,52;UBERON:0006241,6.69e-27,52;UBERON:0007135,6.69e-27,52;UBERON:0010314,2.06e-25,92;UBERON:0010371,4.87e-25,73;UBERON:0003056,6.59e-24,49;UBERON:0000955,3.35e-23,47;UBERON:0006238,3.35e-23,47;UBERON:0002616,1.26e-22,46;UBERON:0003080,5.76e-21,40;UBERON:0002780,3.11e-20,39;UBERON:0001890,3.11e-20,39;UBERON:0006240,3.11e-20,39;UBERON:0002020,8.88e-19,34;UBERON:0003528,1.91e-15,29;UBERON:0002791,1.91e-15,29;UBERON:0001893,1.91e-15,29;UBERON:0000956,1.06e-10,21;UBERON:0001869,1.06e-10,21;UBERON:0000203,1.06e-10,21;UBERON:0002619,3.39e-09,17;UBERON:0002021,2.53e-07,10;UBERON:0000411,2.53e-07,10;UBERON:0001950,2.53e-07,10
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|phase1_expression=8.48788889655408,0,0,0,0,0.16787927191189,0.467225281191051,0.903863264091034,0.703943610758334,0.468129052643987,3.4243593645101,5.10541817570153,1.54080656938085,1.31130603628496,0.999329285446988,1.01237633694913,0.699561878128147,1.57731082679119,2.4680598049033,1.27316895539409,10.8004978491859,1.19149141441062,0.783599367416806,0.159992422793407,0,0,0,0,0.190023419456374,0,0.665191531965914,5.08024538767705,6.76571266343027,0,0,0.332469290716985,0,0,0,0,0,0,0,9.56815816614387,7.29913904780505,3.48738829107195,0,5.66865406589161,1.97717564461025,6.02732687130279,3.3596741190087,1.43752564364972,1.67782606057736,0.725362142011344,1.00828139742739,0.257259436035947,0.573066879877513,2.06268836910977,18.613114399083,19.5726662330652,15.2119536841483,0,0,0,0,0,0.898800331555214,3.07374644257244,10.2652716185393,9.04539786822327,8.62332341540666,45.9898084890124,43.0693654855646,16.4137670948038,13.0349840584801,10.1114066527102,72.6764814595965,50.5641858817343,51.9190082406103,22.0250100509424,24.6101761290482,24.4829284161677,52.4864038122596,49.5231096827878,56.3825534296429,49.4976023595762,56.2368139156457,35.975093044283,0.681535739998656,0.906858721281426,0.289864488701678,0,0,0.539703191637817,0,0.448026887097336,2.38755514223978,4.09032774187339,3.11743205523443,3.88673531961374,7.46470124816407,0,0,0,0.216491041011214,0,0.505524445014783,1.37020655662872,3.36619248741323,5.64080128446334,0.867426633830679,3.04465478312141,1.84492397804847,2.11011696773672,3.05730638552832,2.76466500925286,0.247194967734374,2.74738778147832,0.884610551949874,1.7794353494215,0.662524555381181,0.484875253135222,0,22.2513405728776,24.0863712835473,0.510914110417183,0.599075622529601,1.19980546198682,0.635351135365324,51.527979955259,30.652540388848,31.2879336761032,31.9836749153789,39.1244649715406,38.6485762880782,49.9703090248694,2.34230536855727,2.23932547098167,6.57079171927554,6.94458124425364,7.1566243629487,5.51765050640335,6.30217454318722,6.78171680260718,11.0899493616664,8.71173297936978,10.4945931506896,12.6764651662118,5.38919982332106,6.05139456537022,5.80638709741031,3.06874025398605,3.61461423993277,1.0447564995665,0.61734640922383,2.7864797354589,0,0.51469581422943,1.13665399758237,2.89976081549703,2.57978665979206,3.78130329068131,4.49814997611899,4.32881309844288,2.93107514486019,2.32533944750408,4.02410102099429,1.98501082024188,3.45575684818309,1.47750717671186,1.13496333364198,1.60819986167866,1.3173006917463,1.34206418760372,41.0065399700048,21.9186824367876,0,0,4.69234151177515,2.78684006232526,1.54640953586512,1.61346819698674,1.11189021922435,1.14135375667535,0,1.15289268306808,1.50801125280162,2.38747766449381,1.36474860983384,0.898819408654221,0.432276099749388,0.796565093017469,1.89667900953082,2.74196430263349,2.25415471346161,4.2766778847516,2.90928730751439,3.22624771495465,2.33975187359752,3.39503340353085,2.19798218977925,2.71473760627961,0.296452627087149,0.667380422864376,0.786235980452812,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,0,0.648540907100142,0.549122826376163,0,1.11642284300551,1.87222603868736,0.252578877947112,0.358794827043824,1.4473305640901,2.03228509183265,2.4633883530163,1.14075483509418,1.52770577197669,1.17345124144251,0.335012514883631,0.238043640886014,0.195133647857799,0.945810864637146,0.8858587585951,0.956728611944923,0.983179888294428,1.03610989119537,0.723245292907558,0,1.08781136763742,0.491764273019036,0,57.4771112156295,59.0746900424704,0,1.76729649043061,11.042787679569,12.4940398174924,12.9254038639679,13.860190281248,9.35754431146055,9.6246020468203,13.3587531552715,11.3979784585412,8.30104333687699,23.7777774152137,1.41940085208269,1.78065603667255,0.977321756121456,2.8044920905331,0,4.85561272309963,4.23252979750651,2.07465587731488,2.06711325016541,2.76691633149535,3.10113951801865,3.27180356529755,3.92147116223193,2.21225730555071,2.10837217149998,1.03135543248187,13.6175842301515,11.8840322060665,9.83125996748934,14.3605813471167,16.4926417287314,11.9507107793387,9.21474515371877,10.656273219011,0.704015124191131,0.21183207086382,0.882113592219848,0.32977250588296,0,0.180938774784468,0.119372344003136,0.164140899745061,0.582961673259701,43.5749459724698,1.19609616558497,1.23832120777933,0.925972636848558,1.31857919903284,1.36694227721025,1.37266903923914,1.69978429993855,1.81936888020755,0.552799895217695,1.90934123603023,4.74503990371703,3.45643094115643,2.70013352054503,2.50905955217362,1.09181281873089,0.809186078308924,2.39695021603474,1.30877970992015,0.648074866458964,0,4.50954350947352,3.58839710505549,2.48187735685646,2.72231663681667,3.48731523389874,4.22390313726945,3.87278887530988,7.55185432094911,10.2762157537197,6.03960302065015,4.60848010012585,1.58005560314089,0.810900861160657,0.616265742988964,1.03936658382236,1.43221356533985,0.596044064343795,0.721172697119813,0.147689527174577,0.807731599585181,0.457240839929999,0.201652370273681,0.38983152295901,0.577271049841977,0.935015217452552,2.49403421976732,0,0,0,3.28422309854724,0.93841237725591,1.64836461840539,1.50057865355346,2.00628841614145,41.2268845110459,50.1754507792823,46.9774321020305,38.495112844986,39.7347861466973,37.769694869485,37.1262375127493,31.5224842256954,38.5171047636574,33.6544202638683,8.30298780673413,7.58147259461959,6.14640980714883,3.8897074730927,7.1268475293514,3.8607136774503,4.66718128383392,6.59312183164461,3.85103051510178,7.83361356467772,3.8021894983536,5.09291121742406,4.02658482120494,4.86591158277006,5.57124048869449,4.28664322154766,6.48952225291191,4.62982129112892,2.88460130562315,4.85756436443511,6.17164654293748,3.54951612318675,5.48403236878838,5.66851024866081,4.42314087952054,5.58456412085065,4.75612729469209,5.5244639401947,5.97538100921792,11.7839877048125,4.86403574309114,4.62971067165148,5.32000356120596,6.66228417099654,3.66522560864169,6.49507502638659,5.14649538579898,3.86767897286937,3.82576664137687,1.98532277207564,2.55054619182464
|short_description=p1@Rragb
}}
}}

Latest revision as of 16:58, 1 October 2015

Short description:p1@Rragb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rragb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000039720, ENSMUST00000144175, NM_001004154, uc012hqx.1_5end
EntrezGene:Rragb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rragb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C318.61
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D372.68
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F350.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E452.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E549.52
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D649.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F656.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B222.25
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A451.53
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F131.29
cortex, adult.CNhs10473.12-14D531.98
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F238.65
diencephalon, neonate N30.CNhs11201.1388-42B249.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C67.16
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C611.09
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G810.49
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E841.01
hippocampus, neonate N00.CNhs11228.627-43G121.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C257.48
medulla oblongata, neonate N30.CNhs11200.1396-42A359.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I923.78
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C79.83
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B916.49
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C943.57
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D910.28
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.30e-1733
neuronal stem cell1.30e-1733
neuroblast1.30e-1733
electrically signaling cell1.30e-1733
electrically responsive cell1.57e-1539
electrically active cell1.57e-1539
CNS neuron (sensu Vertebrata)9.60e-1423
neuroblast (sensu Vertebrata)9.60e-1423
ectodermal cell3.52e-1344
neurectodermal cell3.52e-1344
neural cell7.15e-1343

Uber anatomy
Ontology termp-valuen
central nervous system1.80e-3473
nervous system3.18e-3275
neurectoderm1.14e-3164
neural plate1.14e-3164
presumptive neural plate1.14e-3164
regional part of nervous system1.48e-2854
ectoderm-derived structure1.33e-2795
ectoderm1.33e-2795
presumptive ectoderm1.33e-2795
neural tube6.69e-2752
neural rod6.69e-2752
future spinal cord6.69e-2752
neural keel6.69e-2752
structure with developmental contribution from neural crest2.06e-2592
ecto-epithelium4.87e-2573
pre-chordal neural plate6.59e-2449
brain3.35e-2347
future brain3.35e-2347
regional part of brain1.26e-2246
anterior neural tube5.76e-2140
regional part of forebrain3.11e-2039
forebrain3.11e-2039
future forebrain3.11e-2039
gray matter8.88e-1934
brain grey matter1.91e-1529
regional part of telencephalon1.91e-1529
telencephalon1.91e-1529
cerebral cortex1.06e-1021
cerebral hemisphere1.06e-1021
pallium1.06e-1021
regional part of cerebral cortex3.39e-0917
occipital lobe2.53e-0710
visual cortex2.53e-0710
neocortex2.53e-0710
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