FFCP PHASE1:Mm9::chr16:20516958..20516969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13544 | |EntrezGene=13544 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G5E820 | |UniProt=G5E820 | ||
|association_with_transcript=-85bp_to_ENSMUST00000003318_5end | |association_with_transcript=-85bp_to_ENSMUST00000003318_5end | ||
|cluster_id=chr16:20516958..20516969,+ | |||
|description=CAGE_peak_6_at_Dvl3_5end | |description=CAGE_peak_6_at_Dvl3_5end | ||
|id=chr16:20516958..20516969,+ | |id=chr16:20516958..20516969,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.52e-15!23;CL:0000337!1.52e-15!23;CL:0000540!2.32e-09!33;CL:0000047!2.32e-09!33;CL:0000031!2.32e-09!33;CL:0000404!2.32e-09!33;CL:0002609!2.87e-07!6;CL:0000393!7.88e-07!39;CL:0000211!7.88e-07!39;CL:0002319!8.45e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.02e-15,6;CL:0000117,4.21e-11,23;CL:0000337,4.21e-11,23;CL:0000120,2.37e-08,3;CL:0000540,1.53e-07,33;CL:0000047,1.53e-07,33;CL:0000031,1.53e-07,33;CL:0000404,1.53e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.17e-22!34;UBERON:0002791!2.36e-18!29;UBERON:0003528!2.36e-18!29;UBERON:0001893!2.36e-18!29;UBERON:0007811!2.69e-18!86;UBERON:0001049!1.60e-17!52;UBERON:0005068!1.60e-17!52;UBERON:0006241!1.60e-17!52;UBERON:0007135!1.60e-17!52;UBERON:0000955!3.29e-17!50;UBERON:0006238!3.29e-17!50;UBERON:0001017!5.60e-17!73;UBERON:0005743!5.60e-17!73;UBERON:0000153!8.27e-17!94;UBERON:0002616!1.35e-16!49;UBERON:0000073!4.31e-16!75;UBERON:0001016!4.31e-16!75;UBERON:0000956!6.74e-16!21;UBERON:0001869!6.74e-16!21;UBERON:0000203!6.74e-16!21;UBERON:0002780!8.64e-16!39;UBERON:0001890!8.64e-16!39;UBERON:0006240!8.64e-16!39;UBERON:0003080!4.05e-15!40;UBERON:0000033!1.51e-12!63;UBERON:0002619!3.86e-12!17;UBERON:0003056!3.05e-11!49;UBERON:0002021!2.01e-10!10;UBERON:0000411!2.01e-10!10;UBERON:0001950!2.01e-10!10;UBERON:0002346!4.56e-10!71;UBERON:0003075!4.56e-10!71;UBERON:0007284!4.56e-10!71;UBERON:0000064!1.44e-08!99;UBERON:0004121!2.05e-08!102;UBERON:0000924!2.05e-08!102;UBERON:0006601!2.05e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.67e-26,29;UBERON:0002791,2.67e-26,29;UBERON:0001893,2.67e-26,29;UBERON:0000956,3.05e-25,21;UBERON:0001869,3.05e-25,21;UBERON:0000203,3.05e-25,21;UBERON:0002020,3.24e-22,34;UBERON:0002780,3.55e-19,39;UBERON:0001890,3.55e-19,39;UBERON:0006240,3.55e-19,39;UBERON:0003080,1.17e-18,40;UBERON:0002616,5.04e-16,46;UBERON:0000073,7.74e-16,54;UBERON:0000955,1.19e-15,47;UBERON:0006238,1.19e-15,47;UBERON:0002619,1.78e-15,17;UBERON:0001017,1.98e-15,73;UBERON:0001016,5.72e-15,75;UBERON:0003056,6.01e-15,49;UBERON:0002021,4.42e-14,10;UBERON:0000411,4.42e-14,10;UBERON:0001950,4.42e-14,10;UBERON:0001049,5.40e-14,52;UBERON:0005068,5.40e-14,52;UBERON:0006241,5.40e-14,52;UBERON:0007135,5.40e-14,52;UBERON:0004121,2.02e-11,95;UBERON:0000924,2.02e-11,95;UBERON:0006601,2.02e-11,95;UBERON:0002346,4.55e-11,64;UBERON:0003075,4.55e-11,64;UBERON:0007284,4.55e-11,64;UBERON:0010371,1.68e-09,73;UBERON:0010314,3.45e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.319088635981346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,1.89008313664367,1.47227472945967,0.571301968807607,0.220868540951614,0.979926393719632,1.15014565221884,0.919218786610021,1.10115880999389,0.510749352340751,0.153606533256243,0.263772575460388,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0,1.83000241127451,2.01046963380583,0.521472960576829,1.02286182932132,0,0.162241263067758,0,0,0,0,0,0,0,0,0.204109497453984,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0,0.13020438484395,0,0.483168241652012,0.288030006257865,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.457240839929999,0.504130925684203,0.0974578807397524,0.288635524920988,0.584384510907845,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.515559547031063,1.37016503954128,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.229741875822453,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.319088635981346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,1.89008313664367,1.47227472945967,0.571301968807607,0.220868540951614,0.979926393719632,1.15014565221884,0.919218786610021,1.10115880999389,0.510749352340751,0.153606533256243,0.263772575460388,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0,1.83000241127451,2.01046963380583,0.521472960576829,1.02286182932132,0,0.162241263067758,0,0,0,0,0,0,0,0,0.204109497453984,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0,0.13020438484395,0,0.483168241652012,0.288030006257865,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0.295379054349154,0.504832249740738,0.457240839929999,0.504130925684203,0.0974578807397524,0.288635524920988,0.584384510907845,0,0.221985953374065,0,0.335769232728157,0,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.515559547031063,1.37016503954128,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.377252682772152,0.0936415074698824,0,0.229741875822453,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p6@Dvl3 | |short_description=p6@Dvl3 | ||
}} | }} |
Latest revision as of 17:52, 1 October 2015
Short description: | p6@Dvl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dvl3_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_ENSMUST00000003318_5end |
EntrezGene: | Dvl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.02e-15 | 6 |
CNS neuron (sensu Vertebrata) | 4.21e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-11 | 23 |
granule cell | 2.37e-08 | 3 |
neuron | 1.53e-07 | 33 |
neuronal stem cell | 1.53e-07 | 33 |
neuroblast | 1.53e-07 | 33 |
electrically signaling cell | 1.53e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.67e-26 | 29 |
regional part of telencephalon | 2.67e-26 | 29 |
telencephalon | 2.67e-26 | 29 |
cerebral cortex | 3.05e-25 | 21 |
cerebral hemisphere | 3.05e-25 | 21 |
pallium | 3.05e-25 | 21 |
gray matter | 3.24e-22 | 34 |
regional part of forebrain | 3.55e-19 | 39 |
forebrain | 3.55e-19 | 39 |
future forebrain | 3.55e-19 | 39 |
anterior neural tube | 1.17e-18 | 40 |
regional part of brain | 5.04e-16 | 46 |
regional part of nervous system | 7.74e-16 | 54 |
brain | 1.19e-15 | 47 |
future brain | 1.19e-15 | 47 |
regional part of cerebral cortex | 1.78e-15 | 17 |
central nervous system | 1.98e-15 | 73 |
nervous system | 5.72e-15 | 75 |
pre-chordal neural plate | 6.01e-15 | 49 |
occipital lobe | 4.42e-14 | 10 |
visual cortex | 4.42e-14 | 10 |
neocortex | 4.42e-14 | 10 |
neural tube | 5.40e-14 | 52 |
neural rod | 5.40e-14 | 52 |
future spinal cord | 5.40e-14 | 52 |
neural keel | 5.40e-14 | 52 |
ectoderm-derived structure | 2.02e-11 | 95 |
ectoderm | 2.02e-11 | 95 |
presumptive ectoderm | 2.02e-11 | 95 |
neurectoderm | 4.55e-11 | 64 |
neural plate | 4.55e-11 | 64 |
presumptive neural plate | 4.55e-11 | 64 |
ecto-epithelium | 1.68e-09 | 73 |
structure with developmental contribution from neural crest | 3.45e-07 | 92 |