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FFCP PHASE1:Mm9::chr5:117041820..117041839,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68955
|EntrezGene=68955
|HGNC=
|HGNC=
|MCL_coexpression_id=1137
|TSSclassifier=NA
|UniProt=Q8BKA3
|UniProt=Q8BKA3
|association_with_transcript=0bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end
|cluster_id=chr5:117041820..117041839,-
|description=CAGE_peak_1_at_Srrm4_5end
|description=CAGE_peak_1_at_Srrm4_5end
|id=chr5:117041820..117041839,-
|id=chr5:117041820..117041839,-
|ontology_enrichment_celltype=CL:0000540!1.34e-19!33;CL:0000047!1.34e-19!33;CL:0000031!1.34e-19!33;CL:0000404!1.34e-19!33;CL:0000221!1.28e-17!44;CL:0000133!1.28e-17!44;CL:0002319!1.68e-17!43;CL:0000117!2.51e-14!23;CL:0000337!2.51e-14!23;CL:0000393!8.25e-14!39;CL:0000211!8.25e-14!39;CL:0000055!2.63e-12!50
|ontology_enrichment_celltype=CL:0000540!1.34e-19!33;CL:0000047!1.34e-19!33;CL:0000031!1.34e-19!33;CL:0000404!1.34e-19!33;CL:0000221!1.28e-17!44;CL:0000133!1.28e-17!44;CL:0002319!1.68e-17!43;CL:0000117!2.51e-14!23;CL:0000337!2.51e-14!23;CL:0000393!8.25e-14!39;CL:0000211!8.25e-14!39;CL:0000055!2.63e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.22e-22,33;CL:0000047,2.22e-22,33;CL:0000031,2.22e-22,33;CL:0000404,2.22e-22,33;CL:0000221,4.86e-17,44;CL:0000133,4.86e-17,44;CL:0002319,6.96e-17,43;CL:0000393,1.25e-16,39;CL:0000211,1.25e-16,39;CL:0000117,2.72e-16,23;CL:0000337,2.72e-16,23;CL:0000107,9.79e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.98e-37!102;UBERON:0000924!8.98e-37!102;UBERON:0006601!8.98e-37!102;UBERON:0001017!1.57e-36!73;UBERON:0005743!1.57e-36!73;UBERON:0000073!1.68e-36!75;UBERON:0001016!1.68e-36!75;UBERON:0002346!3.79e-34!71;UBERON:0003075!3.79e-34!71;UBERON:0007284!3.79e-34!71;UBERON:0000033!1.88e-30!63;UBERON:0003056!6.35e-26!49;UBERON:0001049!9.40e-26!52;UBERON:0005068!9.40e-26!52;UBERON:0006241!9.40e-26!52;UBERON:0007135!9.40e-26!52;UBERON:0000955!3.71e-25!50;UBERON:0006238!3.71e-25!50;UBERON:0002616!2.46e-24!49;UBERON:0003080!2.48e-20!40;UBERON:0002780!7.16e-20!39;UBERON:0001890!7.16e-20!39;UBERON:0006240!7.16e-20!39;UBERON:0002020!1.83e-18!34;UBERON:0007811!2.21e-16!86;UBERON:0002791!5.53e-16!29;UBERON:0003528!5.53e-16!29;UBERON:0001893!5.53e-16!29;UBERON:0000153!2.09e-13!94;UBERON:0000956!4.79e-12!21;UBERON:0001869!4.79e-12!21;UBERON:0000203!4.79e-12!21;UBERON:0002619!2.79e-09!17;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.12e-39,73;UBERON:0001016,3.18e-38,75;UBERON:0004121,1.72e-37,95;UBERON:0000924,1.72e-37,95;UBERON:0006601,1.72e-37,95;UBERON:0002346,3.58e-37,64;UBERON:0003075,3.58e-37,64;UBERON:0007284,3.58e-37,64;UBERON:0010371,1.52e-31,73;UBERON:0000073,9.70e-30,54;UBERON:0003056,3.13e-29,49;UBERON:0001049,3.19e-28,52;UBERON:0005068,3.19e-28,52;UBERON:0006241,3.19e-28,52;UBERON:0007135,3.19e-28,52;UBERON:0000955,1.31e-25,47;UBERON:0006238,1.31e-25,47;UBERON:0002616,1.10e-24,46;UBERON:0010314,1.23e-24,92;UBERON:0003080,8.65e-23,40;UBERON:0002780,2.94e-22,39;UBERON:0001890,2.94e-22,39;UBERON:0006240,2.94e-22,39;UBERON:0002020,1.27e-20,34;UBERON:0003528,9.24e-18,29;UBERON:0002791,9.24e-18,29;UBERON:0001893,9.24e-18,29;UBERON:0000956,3.21e-13,21;UBERON:0001869,3.21e-13,21;UBERON:0000203,3.21e-13,21;UBERON:0002619,4.71e-10,17;UBERON:0002021,1.83e-08,10;UBERON:0000411,1.83e-08,10;UBERON:0001950,1.83e-08,10;UBERON:0000970,4.28e-07,9;UBERON:0000019,4.28e-07,9;UBERON:0000047,4.28e-07,9;UBERON:0010312,4.28e-07,9;UBERON:0004088,4.28e-07,9;UBERON:0002104,4.28e-07,9;UBERON:0001456,4.28e-07,9;UBERON:0003072,4.28e-07,9;UBERON:0004128,4.28e-07,9;UBERON:0003071,4.28e-07,9;UBERON:0002410,9.79e-07,9
|phase1_expression=16.4953312517938,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86502165752409,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.63088047331563,0.219686182734472,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,58.2671407275642,57.1310257613796,59.5801519295808,0,0,0,0,0,0.299600110518405,1.92109152660777,102.963785022318,120.965320745195,98.4320819124468,23.9946826899195,24.2955395046775,59.7755100168976,61.8203288067625,96.5179725940522,27.5289702498472,40.0938241587489,29.9532739849675,55.2603545589512,53.7032467946145,46.3612899795516,17.3093459380856,15.757353080887,20.4749652020926,27.9897156199984,34.4539467533829,42.6854730939938,1.66597625333005,0.982430281388212,0,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,5.63373679106722,0,0,0,0,0,0,0.91347103775248,0,1.63286352971307,5.20455980298408,6.08930956624282,4.38169444786511,4.37095657602605,6.70255630673517,1.25666591329675,0,0.144599356919912,0,0,0,0,0,118.576222789677,83.778682725382,0.255457055208591,0,0,0,21.8694333531041,16.9275223042892,44.6072950000669,36.8507558807626,35.2887331115856,25.7657175253855,29.5279098783319,0,0,0,16.8353484709179,13.9228873970093,18.6220704591113,33.3114940139896,42.9508730831788,76.8812440410005,102.875317388734,108.412895315606,67.5215797628831,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0.146199987425332,0,0,38.6933505357994,71.7245148283613,0,1.05780226665418,3.62590025909898,8.59275685883622,7.08771037271513,4.43703754171354,3.33567065767305,1.71203063501303,0,3.12928013975621,2.26201687920243,1.39269530428806,1.75467678407208,0,0,0,0.379335801906163,1.94222471436539,0,0.610953983535943,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,15.8945084087914,14.6514608240254,0,0,38.4920027687833,36.3108032195874,35.1140138304462,18.8785350382516,16.4871018820972,25.4768877709949,58.2927410411848,57.5744040085284,69.9659366965347,98.6456441414948,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,0.775284879504663,0,0,0,0,0,48.6828636227917,9.54323798365944,4.39819524861365,13.2888961719587,25.0049729435606,21.4042581122485,20.2395295340609,21.6170113871366,0,0,1.32317038832977,0,0,0,0,0.164140899745061,0.291480836629851,13.7214723487777,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,5.08298667817122,3.34816556547584,1.46361807210128,3.27543845619266,1.61837215661785,0.909188012978695,0,0.518459893167171,0,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.608175645870493,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,0,0,0,0,52.5219213633872,50.6357760157895,52.7063872364245,51.2122483384189,44.5303637850917,57.4099362016172,50.6266875173854,62.1443260449424,53.9239466691203,59.0246755397075,15.6718894852107,41.0995619603062,13.4879548545766,11.1829089851415,11.1094976192831,13.236732608401,8.88986911206461,10.3017528619447,11.2321723357135,10.6132828940795,8.87177549615839,9.99719609346204,11.0496978814461,10.9483010612326,10.4532553499216,12.3836359733599,12.6313915279892,12.1532808892134,9.89006161927936,11.0399190100798,7.20025430009372,9.05126611412621,8.10683045820891,10.61028841416,10.1638130848557,8.88453382862603,10.0610385080025,9.47050961176234,9.37048385536446,13.4674145197857,9.6094364680581,9.1609168609274,5.72923460437565,9.45114731234393,8.68079749415136,29.9772693525535,5.6143586026898,9.23945532407683,2.86932498103265,0.882365676478062,0.927471342481686
|phase1_expression=16.4953312517938,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86502165752409,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.63088047331563,0.219686182734472,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,58.2671407275642,57.1310257613796,59.5801519295808,0,0,0,0,0,0.299600110518405,1.92109152660777,102.963785022318,120.965320745195,98.4320819124468,23.9946826899195,24.2955395046775,59.7755100168976,61.8203288067625,96.5179725940522,27.5289702498472,40.0938241587489,29.9532739849675,55.2603545589512,53.7032467946145,46.3612899795516,17.3093459380856,15.757353080887,20.4749652020926,27.9897156199984,34.4539467533829,42.6854730939938,1.66597625333005,0.982430281388212,0,0,0,0,0.649776417447669,0,1.26399978118577,0,0,0,5.63373679106722,0,0,0,0,0,0,0.91347103775248,0,1.63286352971307,5.20455980298408,6.08930956624282,4.38169444786511,4.37095657602605,6.70255630673517,1.25666591329675,0,0.144599356919912,0,0,0,0,0,118.576222789677,83.778682725382,0.255457055208591,0,0,0,21.8694333531041,16.9275223042892,44.6072950000669,36.8507558807626,35.2887331115856,25.7657175253855,29.5279098783319,0,0,0,16.8353484709179,13.9228873970093,18.6220704591113,33.3114940139896,42.9508730831788,76.8812440410005,102.875317388734,108.412895315606,67.5215797628831,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0,0,0,0,0.146199987425332,0,0,38.6933505357994,71.7245148283613,0,1.05780226665418,3.62590025909898,8.59275685883622,7.08771037271513,4.43703754171354,3.33567065767305,1.71203063501303,0,3.12928013975621,2.26201687920243,1.39269530428806,1.75467678407208,0,0,0,0.379335801906163,1.94222471436539,0,0.610953983535943,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.325929952884052,0.339490171550376,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,15.8945084087914,14.6514608240254,0,0,38.4920027687833,36.3108032195874,35.1140138304462,18.8785350382516,16.4871018820972,25.4768877709949,58.2927410411848,57.5744040085284,69.9659366965347,98.6456441414948,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,0.775284879504663,0,0,0,0,0,48.6828636227917,9.54323798365944,4.39819524861365,13.2888961719587,25.0049729435606,21.4042581122485,20.2395295340609,21.6170113871366,0,0,1.32317038832977,0,0,0,0,0.164140899745061,0.291480836629851,13.7214723487777,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,5.08298667817122,3.34816556547584,1.46361807210128,3.27543845619266,1.61837215661785,0.909188012978695,0,0.518459893167171,0,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.608175645870493,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,0,0,0,0,52.5219213633872,50.6357760157895,52.7063872364245,51.2122483384189,44.5303637850917,57.4099362016172,50.6266875173854,62.1443260449424,53.9239466691203,59.0246755397075,15.6718894852107,41.0995619603062,13.4879548545766,11.1829089851415,11.1094976192831,13.236732608401,8.88986911206461,10.3017528619447,11.2321723357135,10.6132828940795,8.87177549615839,9.99719609346204,11.0496978814461,10.9483010612326,10.4532553499216,12.3836359733599,12.6313915279892,12.1532808892134,9.89006161927936,11.0399190100798,7.20025430009372,9.05126611412621,8.10683045820891,10.61028841416,10.1638130848557,8.88453382862603,10.0610385080025,9.47050961176234,9.37048385536446,13.4674145197857,9.6094364680581,9.1609168609274,5.72923460437565,9.45114731234393,8.68079749415136,29.9772693525535,5.6143586026898,9.23945532407683,2.86932498103265,0.882365676478062,0.927471342481686
|short_description=p1@Srrm4
|short_description=p1@Srrm4
}}
}}

Latest revision as of 18:02, 1 October 2015

Short description:p1@Srrm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Srrm4_5end
Coexpression cluster:MCL_coexpression_mm9:1137
Association with transcript: 0bp_to_ENSMUST00000076124, NM_026886, uc008zfc.1, uc008zfd.1_5end
EntrezGene:Srrm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Srrm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C358.27
Mouse Granule cells, donor2.CNhs12357.11731-123E357.13
Mouse Granule cells, donor3.CNhs12108.11636-122C759.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5102.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5120.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D998.43
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D259.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F261.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D696.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.95
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D455.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F453.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D846.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.99
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F634.45
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E142.69
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2118.58
cerebellum, neonate N30.CNhs11135.1395-42I283.78
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F144.61
cortex, adult.CNhs10473.12-14D536.85
cortex, neonate N30.CNhs11107.1392-42F235.29
diencephalon, adult.CNhs10482.20-12F225.77
diencephalon, neonate N30.CNhs11201.1388-42B229.53
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G416.84
eyeball, embryo E12.CNhs11016.345-16C613.92
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C933.31
eyeball, embryo E17.CNhs11023.1261-18D442.95
eyeball, neonate N00.CNhs11207.633-15C676.88
eyeball, neonate N01.CNhs11140.1532-43E7102.88
eyeball, neonate N02.CNhs11205.1551-44G8108.41
eyeball, neonate N16.CNhs11188.777-19A267.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G171.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D87.09
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.89
medulla oblongata, neonate N30.CNhs11200.1396-42A314.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E236.31
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E335.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D458.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D557.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D669.97
olfactory brain, adult.CNhs10489.18-22I998.65
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G848.68
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B925.00
pituitary gland, embryo E16.CNhs11036.449-43F621.40
pituitary gland, embryo E17.CNhs11039.1265-44F520.24
pituitary gland, neonate N00.CNhs11190.1308-22E921.62
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.72
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A152.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A444.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A557.41
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A650.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A762.14
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A959.02
whole body, embryo E11.CNhs11014.324-5I815.67
whole body, embryo E12.CNhs10587.857-27C941.10
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I529.98
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.12e-3973
nervous system3.18e-3875
ectoderm-derived structure1.72e-3795
ectoderm1.72e-3795
presumptive ectoderm1.72e-3795
neurectoderm3.58e-3764
neural plate3.58e-3764
presumptive neural plate3.58e-3764
ecto-epithelium1.52e-3173
regional part of nervous system9.70e-3054
pre-chordal neural plate3.13e-2949
neural tube3.19e-2852
neural rod3.19e-2852
future spinal cord3.19e-2852
neural keel3.19e-2852
brain1.31e-2547
future brain1.31e-2547
regional part of brain1.10e-2446
structure with developmental contribution from neural crest1.23e-2492
anterior neural tube8.65e-2340
regional part of forebrain2.94e-2239
forebrain2.94e-2239
future forebrain2.94e-2239
gray matter1.27e-2034
brain grey matter9.24e-1829
regional part of telencephalon9.24e-1829
telencephalon9.24e-1829
cerebral cortex3.21e-1321
cerebral hemisphere3.21e-1321
pallium3.21e-1321
regional part of cerebral cortex4.71e-1017
occipital lobe1.83e-0810
visual cortex1.83e-0810
neocortex1.83e-0810
eye4.28e-079
camera-type eye4.28e-079
simple eye4.28e-079
immature eye4.28e-079
ocular region4.28e-079
visual system4.28e-079
face4.28e-079
optic cup4.28e-079
optic vesicle4.28e-079
eye primordium4.28e-079
autonomic nervous system9.79e-079
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