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FFCP PHASE1:Mm9::chr6:77929509..77929616,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:77929509..77929616,-
|DHSsupport=NA
|short_description=p1@Ctnna2
|DPIdataset=NA
|description=CAGE_peak_1_at_Ctnna2_5end
|association_with_transcript=0bp_to_ENSMUST00000075340,ENSMUST00000159626,ENSMUST00000160252,ENSMUST00000162273_5end
|EntrezGene=12386
|EntrezGene=12386
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q61301,Q8BS72
|UniProt=Q61301,Q8BS72
|association_with_transcript=0bp_to_ENSMUST00000075340,ENSMUST00000159626,ENSMUST00000160252,ENSMUST00000162273_5end
|cluster_id=chr6:77929509..77929616,-
|description=CAGE_peak_1_at_Ctnna2_5end
|id=chr6:77929509..77929616,-
|ontology_enrichment_celltype=CL:0000540!1.89e-16!33;CL:0000047!1.89e-16!33;CL:0000031!1.89e-16!33;CL:0000404!1.89e-16!33;CL:0002319!1.15e-15!43;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0000117!6.07e-15!23;CL:0000337!6.07e-15!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39;CL:0000055!5.82e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.60e-17,33;CL:0000047,1.60e-17,33;CL:0000031,1.60e-17,33;CL:0000404,1.60e-17,33;CL:0002319,2.78e-16,43;CL:0000221,2.92e-16,44;CL:0000133,2.92e-16,44;CL:0000117,6.58e-16,23;CL:0000337,6.58e-16,23;CL:0000393,1.31e-12,39;CL:0000211,1.31e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.72e-33!73;UBERON:0005743!2.72e-33!73;UBERON:0000073!6.38e-33!75;UBERON:0001016!6.38e-33!75;UBERON:0002346!2.95e-29!71;UBERON:0003075!2.95e-29!71;UBERON:0007284!2.95e-29!71;UBERON:0004121!1.01e-28!102;UBERON:0000924!1.01e-28!102;UBERON:0006601!1.01e-28!102;UBERON:0001049!8.71e-26!52;UBERON:0005068!8.71e-26!52;UBERON:0006241!8.71e-26!52;UBERON:0007135!8.71e-26!52;UBERON:0000033!7.07e-25!63;UBERON:0000955!3.26e-24!50;UBERON:0006238!3.26e-24!50;UBERON:0002616!1.08e-23!49;UBERON:0003056!8.36e-23!49;UBERON:0003080!4.93e-20!40;UBERON:0002020!6.93e-20!34;UBERON:0002780!1.82e-19!39;UBERON:0001890!1.82e-19!39;UBERON:0006240!1.82e-19!39;UBERON:0002791!1.28e-16!29;UBERON:0003528!1.28e-16!29;UBERON:0001893!1.28e-16!29;UBERON:0007811!5.85e-14!86;UBERON:0000153!9.95e-13!94;UBERON:0000956!3.78e-12!21;UBERON:0001869!3.78e-12!21;UBERON:0000203!3.78e-12!21;UBERON:0002619!3.20e-10!17;UBERON:0000468!4.84e-09!333;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.14e-35,73;UBERON:0001016,1.01e-34,75;UBERON:0002346,3.18e-31,64;UBERON:0003075,3.18e-31,64;UBERON:0007284,3.18e-31,64;UBERON:0004121,8.57e-30,95;UBERON:0000924,8.57e-30,95;UBERON:0006601,8.57e-30,95;UBERON:0000073,1.50e-28,54;UBERON:0001049,4.68e-27,52;UBERON:0005068,4.68e-27,52;UBERON:0006241,4.68e-27,52;UBERON:0007135,4.68e-27,52;UBERON:0010371,1.09e-24,73;UBERON:0003056,2.44e-24,49;UBERON:0000955,2.79e-23,47;UBERON:0006238,2.79e-23,47;UBERON:0002616,9.77e-23,46;UBERON:0010314,2.17e-22,92;UBERON:0003080,2.29e-21,40;UBERON:0002020,3.29e-21,34;UBERON:0002780,9.25e-21,39;UBERON:0001890,9.25e-21,39;UBERON:0006240,9.25e-21,39;UBERON:0003528,1.05e-17,29;UBERON:0002791,1.05e-17,29;UBERON:0001893,1.05e-17,29;UBERON:0000956,6.53e-13,21;UBERON:0001869,6.53e-13,21;UBERON:0000203,6.53e-13,21;UBERON:0002619,7.59e-11,17;UBERON:0002021,4.69e-08,10;UBERON:0000411,4.69e-08,10;UBERON:0001950,4.69e-08,10
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,6.15121311656521,12.8323733389027,6.57936181639204,7.18762821824858,0,0,0,0,0.573066879877513,1.54701627683233,90.030825082521,95.7473672482379,109.019001403063,1.35537812827653,0,0.449949858640699,0,0,5.39280198933128,13.831858991576,49.1488762342184,45.0919834027847,47.5334412654123,47.1324124266276,53.0084498283872,70.6771911470285,71.5965668506226,77.2143780752418,60.5637345496638,61.1622349428049,63.4394982348286,103.266963292742,98.6236798033976,96.3689735530006,28.4766658981409,43.895483582471,48.7426410408024,107.834062283362,90.5483889882295,106.620483012072,2.12033341332915,4.38315048619356,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,2.10666630197628,0,0,0,6.4787973097273,0,0,0,0,0,0,1.02765491747154,0,2.82040064223167,4.68410382268567,9.13396434936424,7.14908041493781,9.79697163592047,11.0533384707563,1.0053327306374,0.247194967734374,0.289198713839823,0,0.970601099684455,0,0,0,32.2058876712702,38.1193006400488,1.27728527604296,0,0,0,53.4752582675217,41.1750542536764,59.8114716057235,49.7137555749911,58.5588397286457,55.271619852843,58.893578493596,2.74966282395854,0,0,7.15502310014011,11.5807194236806,18.6220704591113,22.8678904852794,26.8254575747573,35.7871985535985,34.8469319174791,28.672727715277,32.855328083855,0.862271971731369,5.29497024469894,3.51902248327898,2.19195732427575,0.834141747676794,0.696504333044333,1.23469281844766,2.7864797354589,0,0,0,2.48550927042602,3.28336483973535,4.68161359798639,4.26140524053378,3.34499193970586,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.820837320395476,0.162137619091711,0,0,0.134206418760372,34.9081314616451,62.4630997142256,0,0.528901133327089,8.53153002140936,14.6309103272076,11.5980715189884,7.26060688644033,5.55945109612176,1.52180500890047,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,1.75467678407208,1.79763881730844,0.864552199498777,1.99141273254367,0.379335801906163,2.97046132785295,0,0.610953983535943,0.387904974335251,0.841629838683823,0.885311519739602,0.147610147979602,0,0,0,2.50267658574141,1.96558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,8.90609635321278,6.84452901056509,3.90413697282933,1.40814148973101,1.50755631697634,0.238043640886014,0,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,57.4771112156295,55.2067043849277,0,0.252470927204373,15.1443945319803,15.6175497718655,31.020969273523,6.93009514062401,10.9171350300373,18.6830510320629,19.8357243820698,35.9474705230914,45.4580944638502,44.0210203497876,8.65834519770439,4.98583690268315,4.56083486190013,0.494910368917606,0,3.64170954232472,2.41858845571801,0.754420319023592,0.885905678642318,1.84461088766356,2.06742634534577,1.09060118843252,0.712994756769443,1.26414703174326,0,0,53.1085784975909,22.5076367539138,7.76152102696527,8.3591443662321,16.3153014950892,23.7230527410754,30.1124707701881,13.0919928119278,0,0.21183207086382,2.20528398054962,0,0.807322133479528,0.422190474497091,0.119372344003136,0,1.1659233465194,57.2964183212475,0.512612642393558,0.619160603889667,0,0,0.410082683163076,0.686334519619568,0,0,0,0,4.9032079005076,10.3692928234693,8.5324219249223,7.73626695253534,6.33251434863915,6.60835297285622,4.46328660916814,0.785267825952089,1.16653475962614,0,1.69107881605257,8.67195967055077,11.4166358415397,18.6673140810286,14.3367404060282,19.767866682421,34.6203854004974,37.3686584502137,45.4040961363328,16.1861360953424,9.50499020650956,0.948033361884535,5.87903124341476,6.26536838705446,2.7283372825337,1.25318686967237,0,0.841368146639782,1.03382669022204,0.807731599585181,0.685861259894999,1.00826185136841,0.584747284438515,0.865906574762965,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,73.1917126046411,81.3511629083943,63.4138242848207,83.5800674120184,85.3595104050362,66.152205022717,60.3430412320455,65.7056493027097,63.166758033722,13.9075045762797,45.8878604411186,33.6345203335644,21.8796045361465,19.0747977991464,15.2590112013512,16.8907513129228,17.3069448080671,24.0689407193861,18.1941992469934,20.5318232911094,20.7488975524684,20.8820561657838,20.3599984647484,20.2172850723759,19.0517476513229,20.04798838846,22.1845603533261,21.8405527425753,19.8718542181436,17.4863318716562,15.4403951358624,19.0748951957857,23.8368123277019,21.8333762563567,20.6459643255691,24.5123483649515,17.6256706663355,19.9632047353417,15.7119836064167,22.8965584979656,20.0949144046149,20.0523211153148,20.9164735601054,15.046715656529,28.4784058849258,14.7376913320607,11.6030369186081,8.41668661102911,5.07360263974886,4.63735671240843
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,6.15121311656521,12.8323733389027,6.57936181639204,7.18762821824858,0,0,0,0,0.573066879877513,1.54701627683233,90.030825082521,95.7473672482379,109.019001403063,1.35537812827653,0,0.449949858640699,0,0,5.39280198933128,13.831858991576,49.1488762342184,45.0919834027847,47.5334412654123,47.1324124266276,53.0084498283872,70.6771911470285,71.5965668506226,77.2143780752418,60.5637345496638,61.1622349428049,63.4394982348286,103.266963292742,98.6236798033976,96.3689735530006,28.4766658981409,43.895483582471,48.7426410408024,107.834062283362,90.5483889882295,106.620483012072,2.12033341332915,4.38315048619356,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,2.10666630197628,0,0,0,6.4787973097273,0,0,0,0,0,0,1.02765491747154,0,2.82040064223167,4.68410382268567,9.13396434936424,7.14908041493781,9.79697163592047,11.0533384707563,1.0053327306374,0.247194967734374,0.289198713839823,0,0.970601099684455,0,0,0,32.2058876712702,38.1193006400488,1.27728527604296,0,0,0,53.4752582675217,41.1750542536764,59.8114716057235,49.7137555749911,58.5588397286457,55.271619852843,58.893578493596,2.74966282395854,0,0,7.15502310014011,11.5807194236806,18.6220704591113,22.8678904852794,26.8254575747573,35.7871985535985,34.8469319174791,28.672727715277,32.855328083855,0.862271971731369,5.29497024469894,3.51902248327898,2.19195732427575,0.834141747676794,0.696504333044333,1.23469281844766,2.7864797354589,0,0,0,2.48550927042602,3.28336483973535,4.68161359798639,4.26140524053378,3.34499193970586,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.820837320395476,0.162137619091711,0,0,0.134206418760372,34.9081314616451,62.4630997142256,0,0.528901133327089,8.53153002140936,14.6309103272076,11.5980715189884,7.26060688644033,5.55945109612176,1.52180500890047,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,1.75467678407208,1.79763881730844,0.864552199498777,1.99141273254367,0.379335801906163,2.97046132785295,0,0.610953983535943,0.387904974335251,0.841629838683823,0.885311519739602,0.147610147979602,0,0,0,2.50267658574141,1.96558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,8.90609635321278,6.84452901056509,3.90413697282933,1.40814148973101,1.50755631697634,0.238043640886014,0,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,57.4771112156295,55.2067043849277,0,0.252470927204373,15.1443945319803,15.6175497718655,31.020969273523,6.93009514062401,10.9171350300373,18.6830510320629,19.8357243820698,35.9474705230914,45.4580944638502,44.0210203497876,8.65834519770439,4.98583690268315,4.56083486190013,0.494910368917606,0,3.64170954232472,2.41858845571801,0.754420319023592,0.885905678642318,1.84461088766356,2.06742634534577,1.09060118843252,0.712994756769443,1.26414703174326,0,0,53.1085784975909,22.5076367539138,7.76152102696527,8.3591443662321,16.3153014950892,23.7230527410754,30.1124707701881,13.0919928119278,0,0.21183207086382,2.20528398054962,0,0.807322133479528,0.422190474497091,0.119372344003136,0,1.1659233465194,57.2964183212475,0.512612642393558,0.619160603889667,0,0,0.410082683163076,0.686334519619568,0,0,0,0,4.9032079005076,10.3692928234693,8.5324219249223,7.73626695253534,6.33251434863915,6.60835297285622,4.46328660916814,0.785267825952089,1.16653475962614,0,1.69107881605257,8.67195967055077,11.4166358415397,18.6673140810286,14.3367404060282,19.767866682421,34.6203854004974,37.3686584502137,45.4040961363328,16.1861360953424,9.50499020650956,0.948033361884535,5.87903124341476,6.26536838705446,2.7283372825337,1.25318686967237,0,0.841368146639782,1.03382669022204,0.807731599585181,0.685861259894999,1.00826185136841,0.584747284438515,0.865906574762965,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,73.1917126046411,81.3511629083943,63.4138242848207,83.5800674120184,85.3595104050362,66.152205022717,60.3430412320455,65.7056493027097,63.166758033722,13.9075045762797,45.8878604411186,33.6345203335644,21.8796045361465,19.0747977991464,15.2590112013512,16.8907513129228,17.3069448080671,24.0689407193861,18.1941992469934,20.5318232911094,20.7488975524684,20.8820561657838,20.3599984647484,20.2172850723759,19.0517476513229,20.04798838846,22.1845603533261,21.8405527425753,19.8718542181436,17.4863318716562,15.4403951358624,19.0748951957857,23.8368123277019,21.8333762563567,20.6459643255691,24.5123483649515,17.6256706663355,19.9632047353417,15.7119836064167,22.8965584979656,20.0949144046149,20.0523211153148,20.9164735601054,15.046715656529,28.4784058849258,14.7376913320607,11.6030369186081,8.41668661102911,5.07360263974886,4.63735671240843
|short_description=p1@Ctnna2
}}
}}

Latest revision as of 18:03, 1 October 2015

Short description:p1@Ctnna2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ctnna2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000075340, ENSMUST00000159626, ENSMUST00000160252, ENSMUST00000162273_5end
EntrezGene:Ctnna2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ctnna2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C390.03
Mouse Granule cells, donor2.CNhs12357.11731-123E395.75
Mouse Granule cells, donor3.CNhs12108.11636-122C7109.02
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D549.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F545.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.53
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D553.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D270.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F271.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D677.21
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F361.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D763.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4103.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F498.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D896.37
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6107.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F690.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1106.62
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F59.80
adrenal gland, neonate N00.CNhs11191.1311-23C111.05
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I238.12
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A453.48
corpus striatum, adult.CNhs10487.19-21D841.18
corpus striatum, neonate N00.CNhs11226.630-43F159.81
cortex, adult.CNhs10473.12-14D549.71
cortex, neonate N30.CNhs11107.1392-42F258.56
diencephalon, adult.CNhs10482.20-12F255.27
diencephalon, neonate N30.CNhs11201.1388-42B258.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C922.87
eyeball, embryo E17.CNhs11023.1261-18D426.83
eyeball, neonate N00.CNhs11207.633-15C635.79
eyeball, neonate N01.CNhs11140.1532-43E734.85
eyeball, neonate N02.CNhs11205.1551-44G828.67
eyeball, neonate N16.CNhs11188.777-19A232.86
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E834.91
hippocampus, neonate N00.CNhs11228.627-43G162.46
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D514.63
intestine, embryo E15.CNhs10602.976-16D811.60
intestine, embryo E16.CNhs10585.463-22H47.26
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C257.48
medulla oblongata, neonate N30.CNhs11200.1396-42A355.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D645.46
olfactory brain, adult.CNhs10489.18-22I944.02
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G853.11
pituitary gland, embryo E12.CNhs11018.346-16E622.51
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F623.72
pituitary gland, embryo E17.CNhs11039.1265-44F530.11
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C957.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D48.53
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C511.42
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I514.34
testis, embryo E18.CNhs11027.503-18G519.77
testis, neonate N00.CNhs11189.1300-22B734.62
testis, neonate N07.CNhs11222.726-26I437.37
testis, neonate N10.CNhs11204.763-44D945.40
testis, neonate N20.CNhs11110.839-18H316.19
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A176.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A273.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A381.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D763.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A585.36
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A963.17
whole body, embryo E11.CNhs11014.324-5I813.91
whole body, embryo E12.CNhs10587.857-27C945.89
whole body, embryo E13.CNhs10512.372-23H233.63
whole body, embryo E14.5.CNhs10578.420-27D221.88
whole body, embryo E14.CNhs10519.395-14B119.07
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.92
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I528.48
whole body, embryo E18.CNhs10516.493-3B314.74
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.60e-1733
neuronal stem cell1.60e-1733
neuroblast1.60e-1733
electrically signaling cell1.60e-1733
neural cell2.78e-1643
ectodermal cell2.92e-1644
neurectodermal cell2.92e-1644
CNS neuron (sensu Vertebrata)6.58e-1623
neuroblast (sensu Vertebrata)6.58e-1623
electrically responsive cell1.31e-1239
electrically active cell1.31e-1239

Uber anatomy
Ontology termp-valuen
central nervous system4.14e-3573
nervous system1.01e-3475
neurectoderm3.18e-3164
neural plate3.18e-3164
presumptive neural plate3.18e-3164
ectoderm-derived structure8.57e-3095
ectoderm8.57e-3095
presumptive ectoderm8.57e-3095
regional part of nervous system1.50e-2854
neural tube4.68e-2752
neural rod4.68e-2752
future spinal cord4.68e-2752
neural keel4.68e-2752
ecto-epithelium1.09e-2473
pre-chordal neural plate2.44e-2449
brain2.79e-2347
future brain2.79e-2347
regional part of brain9.77e-2346
structure with developmental contribution from neural crest2.17e-2292
anterior neural tube2.29e-2140
gray matter3.29e-2134
regional part of forebrain9.25e-2139
forebrain9.25e-2139
future forebrain9.25e-2139
brain grey matter1.05e-1729
regional part of telencephalon1.05e-1729
telencephalon1.05e-1729
cerebral cortex6.53e-1321
cerebral hemisphere6.53e-1321
pallium6.53e-1321
regional part of cerebral cortex7.59e-1117
occipital lobe4.69e-0810
visual cortex4.69e-0810
neocortex4.69e-0810
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