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FFCP PHASE1:Mm9::chr18:77804091..77804141,-: Difference between revisions

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(Created page with "{{FFCP |id=chr18:77804091..77804141,- |short_description=p1@Rnf165 |description=CAGE_peak_1_at_Rnf165_5end |association_with_transcript=-216bp_to_ENSMUST00000026494,NM_001...")
 
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{{FFCP
{{FFCP
|id=chr18:77804091..77804141,-
|DHSsupport=NA
|short_description=p1@Rnf165
|DPIdataset=NA
|description=CAGE_peak_1_at_Rnf165_5end
|association_with_transcript=-216bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|EntrezGene=225743
|EntrezGene=225743
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9QAU8
|UniProt=E9QAU8
|association_with_transcript=-216bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|cluster_id=chr18:77804091..77804141,-
|description=CAGE_peak_1_at_Rnf165_5end
|id=chr18:77804091..77804141,-
|ontology_enrichment_celltype=CL:0000540!3.54e-17!33;CL:0000047!3.54e-17!33;CL:0000031!3.54e-17!33;CL:0000404!3.54e-17!33;CL:0000117!1.95e-13!23;CL:0000337!1.95e-13!23;CL:0000221!1.30e-12!44;CL:0000133!1.30e-12!44;CL:0002319!1.61e-12!43;CL:0000393!3.46e-12!39;CL:0000211!3.46e-12!39;CL:0000055!1.53e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.51e-19,33;CL:0000047,1.51e-19,33;CL:0000031,1.51e-19,33;CL:0000404,1.51e-19,33;CL:0000117,8.03e-16,23;CL:0000337,8.03e-16,23;CL:0000393,3.65e-14,39;CL:0000211,3.65e-14,39;CL:0000221,1.53e-13,44;CL:0000133,1.53e-13,44;CL:0002319,2.02e-13,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.30e-28!102;UBERON:0000924!3.30e-28!102;UBERON:0006601!3.30e-28!102;UBERON:0001017!5.01e-28!73;UBERON:0005743!5.01e-28!73;UBERON:0000073!1.38e-26!75;UBERON:0001016!1.38e-26!75;UBERON:0002346!2.63e-26!71;UBERON:0003075!2.63e-26!71;UBERON:0007284!2.63e-26!71;UBERON:0000033!1.34e-22!63;UBERON:0003056!4.46e-21!49;UBERON:0001049!5.54e-21!52;UBERON:0005068!5.54e-21!52;UBERON:0006241!5.54e-21!52;UBERON:0007135!5.54e-21!52;UBERON:0000955!1.60e-19!50;UBERON:0006238!1.60e-19!50;UBERON:0002616!5.72e-19!49;UBERON:0002020!8.96e-19!34;UBERON:0003080!1.37e-17!40;UBERON:0002780!3.47e-17!39;UBERON:0001890!3.47e-17!39;UBERON:0006240!3.47e-17!39;UBERON:0002791!5.64e-16!29;UBERON:0003528!5.64e-16!29;UBERON:0001893!5.64e-16!29;UBERON:0000956!2.59e-12!21;UBERON:0001869!2.59e-12!21;UBERON:0000203!2.59e-12!21;UBERON:0000468!1.34e-10!333;UBERON:0002619!7.90e-10!17;UBERON:0000153!4.47e-09!94;UBERON:0007811!5.87e-09!86;UBERON:0000922!3.90e-08!328;UBERON:0002021!2.30e-07!10;UBERON:0000411!2.30e-07!10;UBERON:0001950!2.30e-07!10;UBERON:0000025!6.37e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.89e-32,73;UBERON:0002346,5.47e-31,64;UBERON:0003075,5.47e-31,64;UBERON:0007284,5.47e-31,64;UBERON:0001016,4.65e-30,75;UBERON:0004121,1.09e-29,95;UBERON:0000924,1.09e-29,95;UBERON:0006601,1.09e-29,95;UBERON:0000073,8.58e-26,54;UBERON:0010371,1.50e-25,73;UBERON:0001049,1.02e-24,52;UBERON:0005068,1.02e-24,52;UBERON:0006241,1.02e-24,52;UBERON:0007135,1.02e-24,52;UBERON:0003056,2.05e-24,49;UBERON:0010314,2.61e-22,92;UBERON:0002020,1.39e-21,34;UBERON:0000955,1.69e-21,47;UBERON:0006238,1.69e-21,47;UBERON:0002616,7.62e-21,46;UBERON:0003080,3.17e-20,40;UBERON:0002780,9.64e-20,39;UBERON:0001890,9.64e-20,39;UBERON:0006240,9.64e-20,39;UBERON:0003528,3.13e-18,29;UBERON:0002791,3.13e-18,29;UBERON:0001893,3.13e-18,29;UBERON:0000956,7.89e-14,21;UBERON:0001869,7.89e-14,21;UBERON:0000203,7.89e-14,21;UBERON:0002619,7.23e-11,17;UBERON:0002021,1.56e-08,10;UBERON:0000411,1.56e-08,10;UBERON:0001950,1.56e-08,10
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|phase1_expression=0.960893082628764,0,0,0.90739263392049,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,1.09012578190223,1.31811709640683,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,17.8038485556446,20.6306481916093,16.4796164911607,0,0,0,0,0,0.299600110518405,0.768436610643109,13.9980976616445,18.0907957364465,12.6194976810829,5.71301968807607,5.96345060569357,16.046294697159,14.4726661237537,19.3035945188104,4.40463523997555,4.72443150915195,4.30098293117482,19.7829431595291,13.9061218275663,17.7110545989298,3.35019598801657,2.25105044012672,4.12555268997387,10.9012576625257,5.41012387036591,15.6575534493252,0.075726193333184,0.226714680320357,5.2175607966302,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,0.517875767294343,1.63286352971307,2.77576522825817,1.82679286987285,0.691846491768175,1.20578112442098,1.52865319276416,1.25666591329675,0,0.144599356919912,0,1.61766849947409,0.662524555381181,0.484875253135222,0,2.34224637609238,4.39838084308256,0.766371165625774,0,0,0,4.6435098215495,4.11750542536764,16.8376831831238,12.5153510538439,8.43861009190091,5.194701113989,6.97637431191358,0.916554274652847,0.373220911830279,0,1.26265113531884,3.513251959993,2.98872735763515,3.24111833649629,5.87748789559289,7.00775941258677,7.43059577652129,8.80796210861451,4.65666067330228,1.94011193639558,1.70195472151037,1.58356011747554,0.43839146485515,0.556094498451196,1.0447564995665,1.23469281844766,1.39323986772945,0,0,0,1.44988040774851,1.17263029990548,0.540186184383045,1.89395788468168,0.590292695242212,1.07986979021165,0.232533944750408,0.268273401399619,1.16765342367169,1.48103864922132,1.64167464079095,0.56748166682099,0.292399974850665,0.658650345873152,0.268412837520744,10.3042074796422,14.7153595702377,0,0,1.2797295032114,2.32236671860439,0.902072229254653,0.201683524623343,0.667134131534611,0.951128130562796,0,0.823494773620054,0.754005626400808,0.198956472041151,0.779856348476481,0,0.648414149624083,0,1.70701110857774,1.5994791765362,1.1270773567308,1.22190796707189,0.969762435838129,1.8936671370386,2.15004226222475,0.590440591918409,0.627994911365499,0.493588655687202,0.296452627087149,0.333690211432188,0.196558995113203,0,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,2.87536413054709,1.86070473834252,0.312037673114561,0,0.358794827043824,0,0.184753190166605,1.32643988239339,2.11854469374634,1.35796068620151,0.234690248288502,0.502518772325447,0.714130922658041,0.780534591431195,1.89162172927429,1.55025282754142,2.23236676120482,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,4.65596710964597,4.80567915028033,0,0.757412781613119,5.36363973007636,4.68526493155966,4.73931475012158,5.25731355495614,4.90157082981267,5.94460714656548,4.45291771842384,5.84511715822624,5.92931666919785,6.10510501201433,0.283880170416537,0.712262414669021,0.325773918707152,0.824850614862677,1.32745138339963,1.45668381692989,0.604647113929502,0,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,0.712994756769443,0,1.05418608574999,1.03135543248187,3.40439605753788,2.88097750450096,1.4229455216103,2.35770738534752,1.06404140185364,1.42695054081656,1.31639216481697,1.8267896946876,0.704015124191131,0,0.882113592219848,2.14352128823924,0.161464426695906,0.72375509913787,0.716234064018819,0.492422699235184,0.291480836629851,3.8939313422207,0.170870880797853,0.82554747185289,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.949007980743406,0.203319467126849,0.86404272657441,0.418176592028937,0.436725127492355,0.809186078308924,0.909188012978695,0,0.259229946583586,1.86401793926078,0,0.598066184175915,1.48912641411388,0.972255941720238,1.29159823477731,1.01373675294467,1.40828686374905,0.781226309063701,0.838874755405687,0.241584120826006,0,0,0.810900861160657,0.410843828659309,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.167884616364078,1.54551675225752,0.187682475451182,0,0.428736758158132,0,16.3778034358949,18.8733346967943,21.1971339972577,14.4356673168698,6.85082519770642,13.5970901530146,8.10027000278167,7.20513925158753,8.15656336171568,9.31968561153276,3.73634451303036,3.59122386060928,4.95127456686989,4.86213434136588,3.77303692730368,4.59608771125035,3.11145418922261,4.32673620201678,2.88827288632634,5.05394423527595,4.30914809813408,4.90428487603798,2.1537546718073,3.07320731543373,3.9056118889817,6.66811167796303,4.05595140806994,3.6652751888104,2.88460130562315,2.50238164228475,2.05721551431249,1.24233064311536,2.38436189947321,3.34296758254356,3.10560955370591,2.62305284464197,2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|short_description=p1@Rnf165
}}
}}

Latest revision as of 18:06, 1 October 2015

Short description:p1@Rnf165
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf165_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -216bp_to_ENSMUST00000026494, NM_001164504, uc008frj.2, uc008frm.2_5end
EntrezGene:Rnf165
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf165

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C317.80
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.47
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F116.84
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C67.01
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G114.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.51e-1933
neuronal stem cell1.51e-1933
neuroblast1.51e-1933
electrically signaling cell1.51e-1933
CNS neuron (sensu Vertebrata)8.03e-1623
neuroblast (sensu Vertebrata)8.03e-1623
electrically responsive cell3.65e-1439
electrically active cell3.65e-1439
ectodermal cell1.53e-1344
neurectodermal cell1.53e-1344
neural cell2.02e-1343

Uber anatomy
Ontology termp-valuen
central nervous system9.89e-3273
neurectoderm5.47e-3164
neural plate5.47e-3164
presumptive neural plate5.47e-3164
nervous system4.65e-3075
ectoderm-derived structure1.09e-2995
ectoderm1.09e-2995
presumptive ectoderm1.09e-2995
regional part of nervous system8.58e-2654
ecto-epithelium1.50e-2573
neural tube1.02e-2452
neural rod1.02e-2452
future spinal cord1.02e-2452
neural keel1.02e-2452
pre-chordal neural plate2.05e-2449
structure with developmental contribution from neural crest2.61e-2292
gray matter1.39e-2134
brain1.69e-2147
future brain1.69e-2147
regional part of brain7.62e-2146
anterior neural tube3.17e-2040
regional part of forebrain9.64e-2039
forebrain9.64e-2039
future forebrain9.64e-2039
brain grey matter3.13e-1829
regional part of telencephalon3.13e-1829
telencephalon3.13e-1829
cerebral cortex7.89e-1421
cerebral hemisphere7.89e-1421
pallium7.89e-1421
regional part of cerebral cortex7.23e-1117
occipital lobe1.56e-0810
visual cortex1.56e-0810
neocortex1.56e-0810
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