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FFCP PHASE1:Mm9::chr5:123300176..123300187,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80751
|EntrezGene=80751
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q99KR6
|UniProt=Q99KR6
|association_with_transcript=-9bp_to_ENSMUST00000031434,NM_030564,uc008zmp.1_5end
|association_with_transcript=-9bp_to_ENSMUST00000031434,NM_030564,uc008zmp.1_5end
|cluster_id=chr5:123300176..123300187,+
|description=CAGE_peak_3_at_Rnf34_5end
|description=CAGE_peak_3_at_Rnf34_5end
|id=chr5:123300176..123300187,+
|id=chr5:123300176..123300187,+
|ontology_enrichment_celltype=CL:0000117!3.61e-12!23;CL:0000337!3.61e-12!23;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0002319!2.60e-09!43;CL:0000540!6.75e-08!33;CL:0000047!6.75e-08!33;CL:0000031!6.75e-08!33;CL:0000404!6.75e-08!33;CL:0000055!2.47e-07!50
|ontology_enrichment_celltype=CL:0000117!3.61e-12!23;CL:0000337!3.61e-12!23;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0002319!2.60e-09!43;CL:0000540!6.75e-08!33;CL:0000047!6.75e-08!33;CL:0000031!6.75e-08!33;CL:0000404!6.75e-08!33;CL:0000055!2.47e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-12,23;CL:0000337,3.30e-12,23;CL:0000221,1.27e-09,44;CL:0000133,1.27e-09,44;CL:0002319,2.79e-09,43;CL:0000540,7.36e-08,33;CL:0000047,7.36e-08,33;CL:0000031,7.36e-08,33;CL:0000404,7.36e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.76e-20!63;UBERON:0001049!3.58e-19!52;UBERON:0005068!3.58e-19!52;UBERON:0006241!3.58e-19!52;UBERON:0007135!3.58e-19!52;UBERON:0000073!5.04e-19!75;UBERON:0001016!5.04e-19!75;UBERON:0000955!1.42e-18!50;UBERON:0006238!1.42e-18!50;UBERON:0002346!1.45e-18!71;UBERON:0003075!1.45e-18!71;UBERON:0007284!1.45e-18!71;UBERON:0002616!2.27e-18!49;UBERON:0001017!2.28e-18!73;UBERON:0005743!2.28e-18!73;UBERON:0004121!1.51e-16!102;UBERON:0000924!1.51e-16!102;UBERON:0006601!1.51e-16!102;UBERON:0003056!1.51e-16!49;UBERON:0002020!7.25e-15!34;UBERON:0003080!4.59e-14!40;UBERON:0002780!1.15e-13!39;UBERON:0001890!1.15e-13!39;UBERON:0006240!1.15e-13!39;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0000956!1.72e-09!21;UBERON:0001869!1.72e-09!21;UBERON:0000203!1.72e-09!21;UBERON:0007811!5.78e-08!86;UBERON:0000153!6.88e-08!94;UBERON:0002619!1.20e-07!17;UBERON:0000025!6.02e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.98e-20,64;UBERON:0003075,1.98e-20,64;UBERON:0007284,1.98e-20,64;UBERON:0000073,3.32e-20,54;UBERON:0001049,3.08e-19,52;UBERON:0005068,3.08e-19,52;UBERON:0006241,3.08e-19,52;UBERON:0007135,3.08e-19,52;UBERON:0001016,5.11e-19,75;UBERON:0001017,2.32e-18,73;UBERON:0004121,1.14e-17,95;UBERON:0000924,1.14e-17,95;UBERON:0006601,1.14e-17,95;UBERON:0000955,5.08e-17,47;UBERON:0006238,5.08e-17,47;UBERON:0010371,5.81e-17,73;UBERON:0002616,8.09e-17,46;UBERON:0003056,1.33e-16,49;UBERON:0002020,6.46e-15,34;UBERON:0010314,2.35e-14,92;UBERON:0003080,4.12e-14,40;UBERON:0002780,1.03e-13,39;UBERON:0001890,1.03e-13,39;UBERON:0006240,1.03e-13,39;UBERON:0003528,2.41e-13,29;UBERON:0002791,2.41e-13,29;UBERON:0001893,2.41e-13,29;UBERON:0000956,1.60e-09,21;UBERON:0001869,1.60e-09,21;UBERON:0000203,1.60e-09,21;UBERON:0002619,1.14e-07,17;UBERON:0000025,5.46e-07,114
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|phase1_expression=3.52327463630547,2.44282785347553,1.81999695755814,1.51232105653415,1.50268718983904,1.00727563147134,1.63528848416868,1.54947988129892,0.703943610758334,1.17032263160997,0.513653904676515,0.398860794976682,0.513602189793617,0.874204024189974,0.666219523631325,2.22722794128809,4.89693314689703,1.57731082679119,1.23402990245165,0.84877930359606,5.01755411891312,1.09220046320974,1.30599894569468,1.91990907352088,1.14704640533585,1.14846392823004,1.29228598847722,1.72376986148711,1.90023419456374,1.51218077855958,1.55211357458713,0,1.84519436275371,0,2.88851619751275,0.831173226792462,1.22501613757421,2.92972141515835,4.6880120671428,4.71171369576418,5.29408339227913,4.78131839470912,3.88408282424923,1.88845226963366,2.93993100536592,1.46837401729345,2.34717403304412,3.70642765846759,4.39372365468944,3.4997381833371,2.37976916763116,1.43752564364972,2.01339127269284,0,0.672187598284928,1.54355661621568,0.286533439938757,0.515672092277442,4.65327859977075,4.23192783417626,5.07065122804943,1.69422266034566,3.55717918444456,1.7997994345628,1.97773272513395,1.4209602298922,1.79760066311043,1.92109152660777,3.83651565541367,5.53524347159932,3.36519938162211,2.57085885963423,5.07997644188711,4.89963196859816,5.94241920313065,3.67687514644008,3.30347642998166,4.72443150915195,5.37622866396852,5.67111037239834,6.12967212136145,4.68822033501084,5.30447698102624,3.37657566019008,4.12555268997387,2.35702868378934,4.12877874317399,2.60959224155421,3.86203585999239,2.34271836331035,1.15945795480671,1.72084775396277,0,1.61910957491345,1.94932925234301,0.896053774194671,2.10666630197628,1.70430322578058,0.779358013808606,0.35333957451034,3.38024207464033,0,0,0,0.649473123033642,0,1.51657333504435,1.48439043634778,1.8125651855302,1.63286352971307,2.25530924795977,1.82679286987285,1.38369298353635,1.50722640552623,1.17588707135705,2.38766523526383,2.47194967734374,2.16899035379867,1.76922110389975,1.13236794963186,1.76673214768315,1.45462575940567,1.86391761218122,4.09893115816166,4.39838084308256,1.78819938646014,1.55759661857696,1.19980546198682,1.65191295194984,3.44518470631092,2.28750301409313,4.02093926761166,4.17178368461463,5.11430914660661,4.98691306942944,4.38051410282946,1.2220723662038,1.61729061793121,2.27450482590307,1.89397670297827,3.3831315170303,2.75882525320168,3.42118046630164,3.61691562805716,3.6739709541717,2.43416068541215,2.71735001223214,2.84573707812917,5.17363183038821,1.89106080167819,2.99116911078713,3.06874025398605,1.39023624612799,0.696504333044333,1.23469281844766,1.99034266818493,2.1066395619397,1.54408744268829,0.568326998791185,1.65700618028402,2.57978665979206,2.34080679899319,1.65721314909647,1.37734962223183,1.07986979021165,2.09280550275367,1.60964040839772,1.63471479314037,1.31647879930784,2.13417703302824,2.02672023864639,2.04679982395465,1.53685080703735,1.47627060636409,3.99550902271842,4.42489833230923,2.97376904685418,1.32225283331772,1.91959425481711,2.32236671860439,2.19074684247559,1.61346819698674,1.55664630691409,1.71203063501303,1.89811624617805,3.12928013975621,1.00534083520108,1.98956472041151,2.14460495831032,0,2.37751854862164,1.1948476395262,2.27601481143698,2.39921876480431,3.38123207019241,2.64746726198909,1.35766741017338,1.82353131714828,2.15004226222475,1.77132177575523,1.72698600625512,2.59134044235781,1.77871576252289,2.33583148002532,3.34150291692445,2.9232074610031,1.21716072833102,1.4470629585145,1.2731292589071,0.863088412352432,2.10775794807546,1.64736847912849,0,1.86070473834252,1.24815069245824,1.76805214562978,2.15276896226295,1.4473305640901,1.47802552133284,1.70542270593436,1.95557971730431,2.03694102930226,1.40814148973101,1.50755631697634,1.6663054862021,1.56106918286239,0.630540576424764,0.664394068946325,2.39182152986231,1.63863314715738,2.07221978239075,1.15719246865209,0,2.71952841909355,1.47529281905711,0.551873492609465,3.85321415970701,5.39173758324135,0.819674726883377,0.504941854408746,0.94652465824877,2.73307121007647,1.29254038639679,0.477937595905104,0.668396022247182,2.26461224631066,2.02405350837447,2.04579100537918,0.395287777946524,2.57057053137446,1.13552068166615,3.91744328067962,1.62886959353576,1.31976098378028,0,1.45668381692989,2.11626489875326,1.88605079755898,0.590603785761546,0.307435147943927,1.03371317267288,1.81766864738753,1.42598951353889,0.632073515871632,1.05418608574999,0,2.04263763452273,1.44048875225048,2.97524972700335,1.71469628025274,2.30542303734956,2.14042581122485,2.79733335023606,1.8267896946876,1.64270195644597,1.48282449604674,1.54369878638473,1.15420377059036,1.61464426695906,1.56813604813205,1.07435109602823,1.14898629821543,0.582961673259701,5.56275906031529,1.02522528478712,1.44470807574256,1.11116716421827,1.50694765603753,0.956859594047176,0.457556346413045,2.37969801991397,0.69975726161829,1.38199973804424,1.90934123603023,1.73984796469624,1.82987520414164,1.62008011232702,0.627264888043406,1.9652630737156,0.674321731924103,0.991841468704031,2.35580347785627,1.55537967950151,1.24267862617385,12.4012446510522,4.78452947340732,3.97100377097034,3.30567020184881,3.09983576346555,3.37912250981556,2.58185925020659,4.4269490846943,3.8797957437513,10.1465330746923,9.50499020650956,1.58005560314089,2.02725215290164,1.95150818613172,1.81889152168913,1.25318686967237,0.79472541912506,1.08175904567972,0.295379054349154,1.41353029927407,1.37172251979,1.00826185136841,0.38983152295901,1.25075394132428,1.16876902181569,1.13365191807606,1.99787358036658,1.43542170575161,2.51826924546118,1.73870634628971,0.93841237725591,1.46521299413812,0.643105137237198,1.00314420807073,2.25900737046827,2.76195141904306,2.29158205375759,2.749650917499,3.42541259885321,4.5323633843382,6.75022500231806,2.70192721934532,2.71885445390523,4.14208249401456,3.00983307994112,2.39414924040619,3.58540572083682,2.67417388775123,0.838452650511929,1.65459157605013,1.77797382241292,0.618105171716683,2.24643446714271,2.27427490587418,1.2673964994512,1.32038438970253,1.40462261204824,1.79270426733634,1.89537047553524,2.85776214769844,2.0859178670074,0.77163688185482,3.29668720642645,0.735994600671987,1.02860775715625,2.30718548007139,1.66905332963125,1.16277133305863,1.2234219453993,1.52306294205018,2.56099162021882,0.789209134313529,1.49384525230448,0.561142271657738,1.30498519936592,1.87158516513571,1.63692417267876,1.70430525304563,1.35034627686799,1.74867404556562,1.87145286756327,1.50409737833809,1.91288332068843,1.54413993383661,1.85494268496337
|short_description=p3@Rnf34
|short_description=p3@Rnf34
}}
}}

Latest revision as of 20:26, 1 October 2015

Short description:p3@Rnf34
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf34_5end
Coexpression cluster:NA
Association with transcript: -9bp_to_ENSMUST00000031434, NM_030564, uc008zmp.1_5end
EntrezGene:Rnf34
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rnf34

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H310.15
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.30e-1223
neuroblast (sensu Vertebrata)3.30e-1223
ectodermal cell1.27e-0944
neurectodermal cell1.27e-0944
neural cell2.79e-0943
neuron7.36e-0833
neuronal stem cell7.36e-0833
neuroblast7.36e-0833
electrically signaling cell7.36e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm1.98e-2064
neural plate1.98e-2064
presumptive neural plate1.98e-2064
regional part of nervous system3.32e-2054
neural tube3.08e-1952
neural rod3.08e-1952
future spinal cord3.08e-1952
neural keel3.08e-1952
nervous system5.11e-1975
central nervous system2.32e-1873
ectoderm-derived structure1.14e-1795
ectoderm1.14e-1795
presumptive ectoderm1.14e-1795
brain5.08e-1747
future brain5.08e-1747
ecto-epithelium5.81e-1773
regional part of brain8.09e-1746
pre-chordal neural plate1.33e-1649
gray matter6.46e-1534
structure with developmental contribution from neural crest2.35e-1492
anterior neural tube4.12e-1440
regional part of forebrain1.03e-1339
forebrain1.03e-1339
future forebrain1.03e-1339
brain grey matter2.41e-1329
regional part of telencephalon2.41e-1329
telencephalon2.41e-1329
cerebral cortex1.60e-0921
cerebral hemisphere1.60e-0921
pallium1.60e-0921
regional part of cerebral cortex1.14e-0717
tube5.46e-07114
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