FFCP PHASE1:Mm9::chr19:10379357..10379444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269060 | |EntrezGene=269060 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=Q6WQJ1,A4FU75 | |UniProt=Q6WQJ1,A4FU75 | ||
|association_with_transcript=0bp_to_ENSMUST00000039327,NM_198114,uc008gpm.1,uc008gpn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000039327,NM_198114,uc008gpm.1,uc008gpn.1_5end | ||
|cluster_id=chr19:10379357..10379444,- | |||
|description=CAGE_peak_1_at_Dagla_5end | |description=CAGE_peak_1_at_Dagla_5end | ||
|id=chr19:10379357..10379444,- | |id=chr19:10379357..10379444,- | ||
|ontology_enrichment_celltype=CL:0000221!1.35e-20!44;CL:0000133!1.35e-20!44;CL:0002319!3.37e-20!43;CL:0000055!4.92e-18!50;CL:0000540!2.20e-16!33;CL:0000047!2.20e-16!33;CL:0000031!2.20e-16!33;CL:0000404!2.20e-16!33;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0002321!5.38e-10!70;CL:0000220!5.38e-10!70;CL:0000117!5.39e-10!23;CL:0000337!5.39e-10!23;CL:0000107!1.58e-07!9 | |ontology_enrichment_celltype=CL:0000221!1.35e-20!44;CL:0000133!1.35e-20!44;CL:0002319!3.37e-20!43;CL:0000055!4.92e-18!50;CL:0000540!2.20e-16!33;CL:0000047!2.20e-16!33;CL:0000031!2.20e-16!33;CL:0000404!2.20e-16!33;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0002321!5.38e-10!70;CL:0000220!5.38e-10!70;CL:0000117!5.39e-10!23;CL:0000337!5.39e-10!23;CL:0000107!1.58e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.07e-20,44;CL:0000133,1.07e-20,44;CL:0002319,2.68e-20,43;CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0000393,1.31e-14,39;CL:0000211,1.31e-14,39;CL:0000117,4.87e-10,23;CL:0000337,4.87e-10,23;CL:0002321,9.07e-10,70;CL:0000107,1.47e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.50e-35!75;UBERON:0001016!5.50e-35!75;UBERON:0001017!1.55e-33!73;UBERON:0005743!1.55e-33!73;UBERON:0004121!2.20e-25!102;UBERON:0000924!2.20e-25!102;UBERON:0006601!2.20e-25!102;UBERON:0001049!6.23e-21!52;UBERON:0005068!6.23e-21!52;UBERON:0006241!6.23e-21!52;UBERON:0007135!6.23e-21!52;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!1.58e-19!49;UBERON:0000033!3.27e-17!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0002020!1.49e-16!34;UBERON:0003080!7.11e-15!40;UBERON:0002780!2.39e-14!39;UBERON:0001890!2.39e-14!39;UBERON:0006240!2.39e-14!39;UBERON:0002791!4.92e-14!29;UBERON:0003528!4.92e-14!29;UBERON:0001893!4.92e-14!29;UBERON:0003056!2.78e-11!49;UBERON:0000956!2.45e-10!21;UBERON:0001869!2.45e-10!21;UBERON:0000203!2.45e-10!21;UBERON:0002619!1.42e-09!17;UBERON:0000010!1.19e-08!11;UBERON:0000468!1.03e-07!333;UBERON:0002410!1.58e-07!9;UBERON:0002021!3.68e-07!10;UBERON:0000411!3.68e-07!10;UBERON:0001950!3.68e-07!10;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0004111!9.20e-07!122 | |ontology_enrichment_uberon=UBERON:0000073!5.50e-35!75;UBERON:0001016!5.50e-35!75;UBERON:0001017!1.55e-33!73;UBERON:0005743!1.55e-33!73;UBERON:0004121!2.20e-25!102;UBERON:0000924!2.20e-25!102;UBERON:0006601!2.20e-25!102;UBERON:0001049!6.23e-21!52;UBERON:0005068!6.23e-21!52;UBERON:0006241!6.23e-21!52;UBERON:0007135!6.23e-21!52;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!1.58e-19!49;UBERON:0000033!3.27e-17!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0002020!1.49e-16!34;UBERON:0003080!7.11e-15!40;UBERON:0002780!2.39e-14!39;UBERON:0001890!2.39e-14!39;UBERON:0006240!2.39e-14!39;UBERON:0002791!4.92e-14!29;UBERON:0003528!4.92e-14!29;UBERON:0001893!4.92e-14!29;UBERON:0003056!2.78e-11!49;UBERON:0000956!2.45e-10!21;UBERON:0001869!2.45e-10!21;UBERON:0000203!2.45e-10!21;UBERON:0002619!1.42e-09!17;UBERON:0000010!1.19e-08!11;UBERON:0000468!1.03e-07!333;UBERON:0002410!1.58e-07!9;UBERON:0002021!3.68e-07!10;UBERON:0000411!3.68e-07!10;UBERON:0001950!3.68e-07!10;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0004111!9.20e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.65e-35,75;UBERON:0001017,1.05e-33,73;UBERON:0004121,9.59e-28,95;UBERON:0000924,9.59e-28,95;UBERON:0006601,9.59e-28,95;UBERON:0000073,2.46e-22,54;UBERON:0001049,4.91e-21,52;UBERON:0005068,4.91e-21,52;UBERON:0006241,4.91e-21,52;UBERON:0007135,4.91e-21,52;UBERON:0002346,5.31e-19,64;UBERON:0003075,5.31e-19,64;UBERON:0007284,5.31e-19,64;UBERON:0000955,2.29e-18,47;UBERON:0006238,2.29e-18,47;UBERON:0002616,7.49e-18,46;UBERON:0010371,3.13e-17,73;UBERON:0002020,1.24e-16,34;UBERON:0003080,6.05e-15,40;UBERON:0002780,2.04e-14,39;UBERON:0001890,2.04e-14,39;UBERON:0006240,2.04e-14,39;UBERON:0003528,4.23e-14,29;UBERON:0002791,4.23e-14,29;UBERON:0001893,4.23e-14,29;UBERON:0010314,5.54e-12,92;UBERON:0003056,2.47e-11,49;UBERON:0000956,2.20e-10,21;UBERON:0001869,2.20e-10,21;UBERON:0000203,2.20e-10,21;UBERON:0002619,1.29e-09,17;UBERON:0000010,1.09e-08,11;UBERON:0002410,1.47e-07,9;UBERON:0002021,3.43e-07,10;UBERON:0000411,3.43e-07,10;UBERON:0001950,3.43e-07,10;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12 | |||
|phase1_expression=9.92922852049723,2.09385244583617,0.909998478779072,0.90739263392049,1.00179145989269,4.70061961353291,3.50418960893289,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.84877930359606,10.8004978491859,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0.430761996159075,1.939241094173,3.23039813075836,1.51218077855958,1.77384408524244,0,0,0,2.88851619751275,5.31950865147176,3.67504841272264,0,0,0,0,0,0,4.65818226509636,4.25783111121961,3.30384153891027,13.3006528539167,7.84890562969608,13.8402295122717,11.2769341463084,10.4989816219022,7.18762821824858,0.167782606057736,0,0,4.11615097657515,3.43840127926508,4.64104883049698,14.1621522601718,13.7537654610729,13.9442908771359,11.5207140903505,13.3394219416671,6.29929802096979,5.93319817540185,4.2628806896766,15.8788058574755,5.37905627450176,7.46565208621039,8.50537411489651,3.99617426567626,19.9955689082663,20.0990372265968,6.98197555525238,7.66763768145891,9.19218786610021,31.9336054898227,39.8384494825786,32.7181915835799,12.7929699098288,16.6507511356386,11.9810075228055,18.1468949350898,20.8222165711722,19.2525792198781,22.9810296669461,21.3557521198654,16.0303523409758,33.6224298399337,44.8139351433238,4.92769630792852,3.44169550792555,0.679971333707751,0,0.649776417447669,0.448026887097336,2.94933282276679,6.98764322570037,4.67614808285164,6.00677276667578,11.5491604216878,3.84979432242953,5.09610479413291,0,1.94841936910093,2.02687892380079,3.0331466700887,3.08296475241462,1.03575153458869,3.41416919849097,2.4287945747259,2.74018930480927,3.68984795609694,3.3158980921577,3.41007250693544,3.76999773989026,1.48316980640624,15.0383331196708,0.884610551949874,8.41187619726528,3.5334642953663,1.45462575940567,3.72783522436244,37.1831612204665,44.6121485512659,2.81002760729451,0,0,0,24.5656648623909,52.612569324142,14.9528679014309,57.0143770230667,50.3759450940751,33.6616632186487,30.9880812459417,5.6011650117674,2.73695335342205,2.27450482590307,3.15662783829711,2.47228841629137,1.37941262660084,2.52086981727489,2.56198190320716,3.40182495756639,3.33095672740609,3.46696380870997,5.43277078551933,1.5089759505299,2.26927296201383,4.04687585577082,4.3839146485515,3.89266148915837,7.66154766348766,5.35033554660653,2.58744546864041,0,0.257347907114715,0,1.44988040774851,1.87620847984877,1.44049649168812,2.13070262026689,1.77087808572663,1.23413690309903,2.09280550275367,2.68273401399619,2.10177616260905,1.6455984991348,2.79084688934462,3.4859588104718,4.38599962275997,4.17145219052996,3.75777972529041,64.7693041577512,16.3618333683062,0.660837565967596,2.90895623329899,4.90562976231038,6.27039014023184,5.7990357594942,7.46229041106367,4.44756087689741,4.75564065281398,3.32170343081158,3.62337700392824,3.77002813200404,3.58121649674071,3.31438948102504,4.49409704327111,2.37751854862164,3.38540164532424,3.03468641524931,4.45569199177942,3.38123207019241,3.46207257337034,1.55161989734101,4.48869247298039,4.17361145020098,3.83786384746966,2.66897837330337,2.46794327843601,0.592905254174298,1.00107063429656,1.17935397067922,0.674586337154561,0.608580364165509,0.72353147925725,0.25462585178142,1.15078454980324,1.13494658742525,1.09824565275233,1.43768206527355,1.86070473834252,2.80833905803104,0.757736633841335,0.896987067609561,0.482443521363367,5.35784251483154,2.08440552947533,3.7481944581666,5.60158783058121,3.52035372432753,5.86271901046355,3.57065461329021,4.48807390072937,4.57141917907954,4.20782910332672,6.05928120898451,5.24362607090362,8.11619414769709,5.78596234326046,1.50791283939272,2.71952841909355,5.4094070032094,2.20749397043786,17.0183625387059,17.3473296156461,3.44263385291018,4.79694761688309,70.042824710409,62.4701990874622,83.584278320326,75.2751713550539,85.7774895217217,93.4152551603147,61.5312266545839,55.8208688610606,58.107303358139,18.6366363524648,4.82596289708113,5.52003371368491,4.88660878060728,5.27904393512113,9.2921596837974,3.64170954232472,3.02323556964751,3.39489143560617,3.2483208216885,6.45613810682248,5.16856586336442,4.72593848320757,7.48644494607915,6.63677191665214,9.48767477174989,12.3762651897824,11.9153862013826,3.42116078659489,4.78627129996192,2.57204442037911,4.96552654198366,6.95638388648075,4.11372551505302,6.69822888052118,1.17335854031855,0.42366414172764,6.3953235435939,5.27636009412736,1.77610869365496,3.31721087104857,1.90995750405018,1.14898629821543,4.08073171281791,18.17167959703,0.854354403989263,5.98521917093345,4.07427960213366,1.13021074202815,1.0935538217682,1.83022538565218,0,0.139951452323658,0,6.68269432610579,5.21954389408873,5.08298667817122,4.86024033698106,3.97267762427491,3.9305261474312,5.93403124093211,5.45512807787217,4.97336289769656,3.11075935900303,14.2908042009993,0.56369293868419,3.58839710505549,3.14371131868485,2.33341426012857,4.52059382172059,4.05494701177868,4.92900402312167,3.25510962109875,3.67007705489988,2.17425708743405,2.01621004380506,0.632022241256357,2.22997736819181,1.54066435747241,1.16928740680016,1.2531868696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| ||
|short_description=p1@Dagla | |short_description=p1@Dagla | ||
}} | }} |
Latest revision as of 20:30, 1 October 2015
Short description: | p1@Dagla |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dagla_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000039327, NM_198114, uc008gpm.1, uc008gpn.1_5end |
EntrezGene: | Dagla |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.07e-20 | 44 |
neurectodermal cell | 1.07e-20 | 44 |
neural cell | 2.68e-20 | 43 |
neuron | 1.84e-16 | 33 |
neuronal stem cell | 1.84e-16 | 33 |
neuroblast | 1.84e-16 | 33 |
electrically signaling cell | 1.84e-16 | 33 |
electrically responsive cell | 1.31e-14 | 39 |
electrically active cell | 1.31e-14 | 39 |
CNS neuron (sensu Vertebrata) | 4.87e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.87e-10 | 23 |
embryonic cell | 9.07e-10 | 70 |
autonomic neuron | 1.47e-07 | 9 |