FFCP PHASE1:Mm9::chr5:131783124..131783164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212996 | |EntrezGene=212996 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1202 | |MCL_coexpression_id=1202 | ||
|TSSclassifier=NA | |||
|UniProt=Q59J92,Q7TT15,Q8BU49 | |UniProt=Q59J92,Q7TT15,Q8BU49 | ||
|association_with_transcript=227bp_to_NM_145218,uc008zuq.1,uc008zur.1,uc008zus.1_5end | |association_with_transcript=227bp_to_NM_145218,uc008zuq.1,uc008zur.1,uc008zus.1_5end | ||
|cluster_id=chr5:131783124..131783164,- | |||
|description=CAGE_peak_1_at_Wbscr17_5end | |description=CAGE_peak_1_at_Wbscr17_5end | ||
|id=chr5:131783124..131783164,- | |id=chr5:131783124..131783164,- | ||
|ontology_enrichment_celltype=CL:0000055!4.30e-10!50;CL:0000221!1.13e-09!44;CL:0000133!1.13e-09!44;CL:0002319!1.22e-09!43;CL:0000393!7.50e-07!39;CL:0000211!7.50e-07!39 | |ontology_enrichment_celltype=CL:0000055!4.30e-10!50;CL:0000221!1.13e-09!44;CL:0000133!1.13e-09!44;CL:0002319!1.22e-09!43;CL:0000393!7.50e-07!39;CL:0000211!7.50e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.18e-10,44;CL:0000133,2.18e-10,44;CL:0002319,2.36e-10,43;CL:0000393,2.54e-07,39;CL:0000211,2.54e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.59e-18!102;UBERON:0000924!2.59e-18!102;UBERON:0006601!2.59e-18!102;UBERON:0000073!6.96e-18!75;UBERON:0001016!6.96e-18!75;UBERON:0001017!6.12e-17!73;UBERON:0005743!6.12e-17!73;UBERON:0001049!1.50e-13!52;UBERON:0005068!1.50e-13!52;UBERON:0006241!1.50e-13!52;UBERON:0007135!1.50e-13!52;UBERON:0002346!1.68e-13!71;UBERON:0003075!1.68e-13!71;UBERON:0007284!1.68e-13!71;UBERON:0000955!1.76e-13!50;UBERON:0006238!1.76e-13!50;UBERON:0002616!2.01e-13!49;UBERON:0002020!7.88e-13!34;UBERON:0000033!1.27e-12!63;UBERON:0002791!2.60e-11!29;UBERON:0003528!2.60e-11!29;UBERON:0001893!2.60e-11!29;UBERON:0003080!1.72e-09!40;UBERON:0000956!2.63e-09!21;UBERON:0001869!2.63e-09!21;UBERON:0000203!2.63e-09!21;UBERON:0002780!3.41e-09!39;UBERON:0001890!3.41e-09!39;UBERON:0006240!3.41e-09!39;UBERON:0003056!3.94e-09!49;UBERON:0000468!5.79e-09!333;UBERON:0002619!1.32e-08!17;UBERON:0000153!5.52e-07!94 | |ontology_enrichment_uberon=UBERON:0004121!2.59e-18!102;UBERON:0000924!2.59e-18!102;UBERON:0006601!2.59e-18!102;UBERON:0000073!6.96e-18!75;UBERON:0001016!6.96e-18!75;UBERON:0001017!6.12e-17!73;UBERON:0005743!6.12e-17!73;UBERON:0001049!1.50e-13!52;UBERON:0005068!1.50e-13!52;UBERON:0006241!1.50e-13!52;UBERON:0007135!1.50e-13!52;UBERON:0002346!1.68e-13!71;UBERON:0003075!1.68e-13!71;UBERON:0007284!1.68e-13!71;UBERON:0000955!1.76e-13!50;UBERON:0006238!1.76e-13!50;UBERON:0002616!2.01e-13!49;UBERON:0002020!7.88e-13!34;UBERON:0000033!1.27e-12!63;UBERON:0002791!2.60e-11!29;UBERON:0003528!2.60e-11!29;UBERON:0001893!2.60e-11!29;UBERON:0003080!1.72e-09!40;UBERON:0000956!2.63e-09!21;UBERON:0001869!2.63e-09!21;UBERON:0000203!2.63e-09!21;UBERON:0002780!3.41e-09!39;UBERON:0001890!3.41e-09!39;UBERON:0006240!3.41e-09!39;UBERON:0003056!3.94e-09!49;UBERON:0000468!5.79e-09!333;UBERON:0002619!1.32e-08!17;UBERON:0000153!5.52e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.19e-19,95;UBERON:0000924,3.19e-19,95;UBERON:0006601,3.19e-19,95;UBERON:0001016,3.32e-19,75;UBERON:0001017,3.52e-18,73;UBERON:0000073,4.01e-16,54;UBERON:0010371,3.68e-15,73;UBERON:0001049,1.73e-14,52;UBERON:0005068,1.73e-14,52;UBERON:0006241,1.73e-14,52;UBERON:0007135,1.73e-14,52;UBERON:0002346,5.07e-14,64;UBERON:0003075,5.07e-14,64;UBERON:0007284,5.07e-14,64;UBERON:0002020,7.99e-14,34;UBERON:0000955,1.46e-12,47;UBERON:0006238,1.46e-12,47;UBERON:0002616,1.70e-12,46;UBERON:0003528,3.59e-12,29;UBERON:0002791,3.59e-12,29;UBERON:0001893,3.59e-12,29;UBERON:0010314,4.93e-12,92;UBERON:0003080,4.42e-10,40;UBERON:0000956,5.46e-10,21;UBERON:0001869,5.46e-10,21;UBERON:0000203,5.46e-10,21;UBERON:0002780,9.28e-10,39;UBERON:0001890,9.28e-10,39;UBERON:0006240,9.28e-10,39;UBERON:0003056,1.82e-09,49;UBERON:0002619,3.15e-09,17;UBERON:0002021,8.24e-07,10;UBERON:0000411,8.24e-07,10;UBERON:0001950,8.24e-07,10 | |||
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| ||
|short_description=p1@Wbscr17 | |short_description=p1@Wbscr17 | ||
}} | }} |
Latest revision as of 23:16, 1 October 2015
Short description: | p1@Wbscr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wbscr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1202 |
Association with transcript: | 227bp_to_NM_145218, uc008zuq.1, uc008zur.1, uc008zus.1_5end |
EntrezGene: | Wbscr17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.18e-10 | 44 |
neurectodermal cell | 2.18e-10 | 44 |
neural cell | 2.36e-10 | 43 |
electrically responsive cell | 2.54e-07 | 39 |
electrically active cell | 2.54e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.19e-19 | 95 |
ectoderm | 3.19e-19 | 95 |
presumptive ectoderm | 3.19e-19 | 95 |
nervous system | 3.32e-19 | 75 |
central nervous system | 3.52e-18 | 73 |
regional part of nervous system | 4.01e-16 | 54 |
ecto-epithelium | 3.68e-15 | 73 |
neural tube | 1.73e-14 | 52 |
neural rod | 1.73e-14 | 52 |
future spinal cord | 1.73e-14 | 52 |
neural keel | 1.73e-14 | 52 |
neurectoderm | 5.07e-14 | 64 |
neural plate | 5.07e-14 | 64 |
presumptive neural plate | 5.07e-14 | 64 |
gray matter | 7.99e-14 | 34 |
brain | 1.46e-12 | 47 |
future brain | 1.46e-12 | 47 |
regional part of brain | 1.70e-12 | 46 |
brain grey matter | 3.59e-12 | 29 |
regional part of telencephalon | 3.59e-12 | 29 |
telencephalon | 3.59e-12 | 29 |
structure with developmental contribution from neural crest | 4.93e-12 | 92 |
anterior neural tube | 4.42e-10 | 40 |
cerebral cortex | 5.46e-10 | 21 |
cerebral hemisphere | 5.46e-10 | 21 |
pallium | 5.46e-10 | 21 |
regional part of forebrain | 9.28e-10 | 39 |
forebrain | 9.28e-10 | 39 |
future forebrain | 9.28e-10 | 39 |
pre-chordal neural plate | 1.82e-09 | 49 |
regional part of cerebral cortex | 3.15e-09 | 17 |
occipital lobe | 8.24e-07 | 10 |
visual cortex | 8.24e-07 | 10 |
neocortex | 8.24e-07 | 10 |