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FFCP PHASE2:Mm9::chr11:68902017..68902055,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:22318 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:P63044,uniprot:Q8CHR4,uniprot:Q62442 |associ...")
 
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|DHSsupport=NA
|DHSsupport=NA
|DPIdataset=NA
|DPIdataset=NA
|EntrezGene=entrezgene:22318
|EntrezGene=22318
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|TSSclassifier=NA
|UniProt=uniprot:P63044,uniprot:Q8CHR4,uniprot:Q62442
|UniProt=P63044,Q8CHR4,Q62442
|association_with_transcript=0bp_to_ENSMUST00000149559,ENSMUST00000149780,NM_009497,uc007jpe.1_5end
|association_with_transcript=0bp_to_ENSMUST00000149559,ENSMUST00000149780,NM_009497,uc007jpe.1_5end
|cluster_id=chr11:68902017..68902055,+
|cluster_id=chr11:68902017..68902055,+

Latest revision as of 23:41, 1 October 2015

Short description:p1@Vamp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vamp2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000149559, ENSMUST00000149780, NM_009497, uc007jpe.1_5end
EntrezGene:Vamp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vamp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G774.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I527.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I336.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I728.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.90
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E946.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E764.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F286.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E440.75
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E855.34
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.17
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A555.96
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A638.20
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3250.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.85
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D139.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D232.12
GP2+ M cell, pool1.CNhs13228.11845-124H922.40
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I226.72
Ileum epithelium, pool1.CNhs13199.10252-104B934.96
Ileum epithelium, pool2.CNhs13232.10253-104C123.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I340.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G964.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D832.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D936.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7111.10
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2101.82
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8131.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3143.68
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C461.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A262.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I979.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A166.88
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C143.99
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E139.26
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C558.27
Mouse Granule cells, donor1.CNhs12131.11713-123C3275.56
Mouse Granule cells, donor2.CNhs12357.11731-123E3292.53
Mouse Granule cells, donor3.CNhs12108.11636-122C7273.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.27
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C750.84
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E758.34
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D257.55
Mouse Microglia, donor1.CNhs12629.11718-123C898.27
Mouse Microglia, donor2.CNhs12634.11736-123E8133.32
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5135.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5151.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9128.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1478.47
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5403.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2146.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2152.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6130.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3516.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3835.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7775.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4266.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4314.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8245.35
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4605.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5608.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6683.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6402.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6425.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1330.30
Mouse Schwann, donor1.CNhs12507.11728-123D938.77
Mouse Schwann, donor2.CNhs12573.11746-123F955.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G344.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7110.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I749.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E345.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.40
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G681.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H144.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I866.25
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B670.45
accessory axillary lymph node, adult.CNhs10475.1063-29H9148.63
adrenal gland, adult.CNhs10508.49-24D7142.36
adrenal gland, embryo E14.CNhs11038.406-44C549.27
adrenal gland, embryo E16.CNhs11004.1254-43D677.33
adrenal gland, embryo E17.CNhs11043.1263-45I166.65
adrenal gland, embryo E18.CNhs11026.1262-18F585.61
adrenal gland, neonate N00.CNhs11191.1311-23C1121.35
adrenal gland, neonate N25.CNhs11223.1377-27I390.48
amnion, adult pregnant day17.5.CNhs10488.583-22A870.45
aorta, adult.CNhs10498.46-23H1176.70
bone (os femoris), adult.CNhs10483.56-12G253.08
bone (os femoris), neonate N02.CNhs11227.1985-43F572.15
bone (os femoris), neonate N16.CNhs11225.1525-43A657.42
bone (os femoris), neonate N20.CNhs11195.1350-25C355.28
cecum, adult.CNhs10467.37-13H480.15
cerebellum, adult.CNhs10494.15-8B2737.22
cerebellum, neonate N30.CNhs11135.1395-42I2542.05
colon, adult.CNhs10468.36-18H750.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.14
corpora quadrigemina, adult.CNhs10501.16-22A4845.57
corpus striatum, adult.CNhs10487.19-21D81099.83
corpus striatum, neonate N00.CNhs11226.630-43F1396.44
cortex, adult.CNhs10473.12-14D51373.73
cortex, neonate N30.CNhs11107.1392-42F21241.24
diencephalon, adult.CNhs10482.20-12F21022.73
diencephalon, neonate N30.CNhs11201.1388-42B2867.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B175.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A263.32
epididymis, adult.CNhs10490.58-23B2109.18
eyeball, adult.CNhs10484.31-12G4243.90
eyeball, embryo E12.CNhs11016.345-16C642.81
eyeball, embryo E14.CNhs10521.399-16E248.74
eyeball, embryo E15.CNhs10593.426-16C973.65
eyeball, embryo E17.CNhs11023.1261-18D492.68
eyeball, neonate N00.CNhs11207.633-15C6120.15
eyeball, neonate N01.CNhs11140.1532-43E7140.03
eyeball, neonate N02.CNhs11205.1551-44G8133.24
eyeball, neonate N16.CNhs11188.777-19A2445.75
forelimb, embryo E11.CNhs10596.335-25E230.61
forelimb, embryo E12.CNhs10600.359-14H250.49
forelimb, embryo E13.CNhs10589.384-1E264.57
forelimb, embryo E14.CNhs10577.413-26A867.73
forelimb, embryo E15.CNhs11007.437-20E758.67
forelimb, embryo E17.CNhs10598.1517-43C498.21
forelimb, embryo E18.CNhs11008.1520-43B594.66
gonad, embryo E13.CNhs11044.1564-45I631.25
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.22
heart, embryo E11.CNhs10586.331-24E973.94
heart, embryo E12.CNhs11015.353-12F574.11
heart, embryo E13.CNhs11013.376-3I967.34
heart, embryo E14.CNhs10597.403-26D485.94
heart, embryo E15.CNhs11017.431-16C878.12
heart, embryo E16.CNhs11021.457-17C677.44
heart, embryo E17.CNhs11025.479-18E591.15
heart, embryo E18.CNhs11030.1283-20G385.31
heart, neonate N00.CNhs11213.639-21E384.07
heart, neonate N03.CNhs11221.1349-25I297.42
heart, neonate N10.CNhs11118.749-24G194.07
heart, neonate N16.CNhs11209.782-15G1116.98
heart, neonate N20.CNhs11127.821-26I6114.04
heart, neonate N25.CNhs11196.1351-25D3105.60
heart, neonate N30.CNhs11202.1390-42D2110.18
hippocampus, adult.CNhs10478.13-16E81200.97
hippocampus, neonate N00.CNhs11228.627-43G1327.75
intestinal mucosa, adult.CNhs10506.860-29I353.20
intestine, adult.CNhs10496.178-9A340.46
intestine, embryo E12.CNhs11019.1251-16I544.36
intestine, embryo E13.CNhs11010.381-16D542.03
intestine, embryo E15.CNhs10602.976-16D853.22
intestine, embryo E16.CNhs10585.463-22H461.72
intestine, embryo E17.CNhs10582.482-18D352.04
intestine, embryo E18.CNhs10526.1289-20F756.50
intestine, neonate N00.CNhs11126.644-26D152.67
intestine, neonate N01.CNhs11192.1322-23E956.49
intestine, neonate N06.CNhs11102.688-20B854.54
intestine, neonate N07.CNhs11095.720-20F266.65
intestine, neonate N10.CNhs11098.755-23A567.65
intestine, neonate N20.CNhs11187.827-18D153.93
intestine, neonate N25.CNhs11121.1352-25E344.52
intestine, neonate N30.CNhs11131.1384-42G148.39
kidney, embryo E14.CNhs10606.411-4I949.12
kidney, embryo E15.CNhs10997.434-16F841.36
kidney, embryo E16.CNhs10584.464-22A561.99
kidney, embryo E17.CNhs11028.483-18I248.88
kidney, embryo E18.CNhs11001.1288-20C749.85
kidney, neonate N00.CNhs11214.646-21G759.19
kidney, neonate N10.CNhs11206.758-6D566.90
kidney, neonate N20.CNhs11113.832-19I177.50
kidney, neonate N25.CNhs11122.1353-25F360.92
kidney, neonate N30.CNhs11203.1385-42H173.17
liver, adult pregnant day01.CNhs10466.508-5B232.91
liver, embryo E12.CNhs10601.355-15F824.69
liver, embryo E13.CNhs10524.378-3H623.98
liver, embryo E14.CNhs10594.409-16E125.86
liver, embryo E15.CNhs10520.433-16D725.15
liver, embryo E16.CNhs10523.462-17F531.11
liver, embryo E17.CNhs10510.481-18A326.23
liver, embryo E18.CNhs10579.499-43G434.81
liver, neonate N00.CNhs11117.641-24F429.51
liver, neonate N03.CNhs11123.1345-25G228.01
liver, neonate N06.CNhs11101.684-20A848.88
liver, neonate N07.CNhs11103.716-20H239.07
liver, neonate N10.CNhs11115.751-24B932.76
liver, neonate N20.CNhs11220.823-25A329.55
liver, neonate N25.CNhs11198.1368-26H123.86
liver, neonate N30.CNhs11106.1382-42D135.70
lung, adult.CNhs10474.28-22B1128.96
lung, embryo E12.CNhs10522.354-16G232.40
lung, embryo E14.CNhs10604.404-26F845.47
lung, embryo E15.CNhs11020.432-17C533.44
lung, embryo E16.CNhs10998.458-17B646.23
lung, embryo E17.CNhs10605.480-44A667.17
lung, embryo E18.CNhs10583.1287-20I679.03
lung, neonate N00.CNhs11224.640-42C677.08
lung, neonate N06.CNhs11212.683-20E584.02
lung, neonate N07.CNhs11111.715-19A380.17
lung, neonate N10.CNhs11219.750-23E693.76
lung, neonate N20.CNhs11109.822-18A489.96
lung, neonate N25.CNhs11119.1359-25C789.28
lung, neonate N30.CNhs11133.1394-42H282.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.40
mammary gland, adult lactating day02.CNhs10480.595-22B648.19
mammary gland, adult pregnant day19.CNhs10476.588-5H261.53
medulla oblongata, adult.CNhs10477.17-12C2498.35
medulla oblongata, neonate N30.CNhs11200.1396-42A3522.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C744.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C271.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E173.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E281.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3157.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D752.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D860.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D478.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5112.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6115.42
olfactory brain, adult.CNhs10489.18-22I91553.27
ovary, adult.CNhs10507.91-2I783.89
ovary, embryo E18.CNhs11040.505-44H764.64
ovary, neonate N00.CNhs11217.1299-22I471.34
oviduct, adult pregnant day01.CNhs10500.988-6G689.91
pancreas, adult.CNhs10486.34-16E469.03
pancreas, embryo E14.CNhs11012.405-44F440.06
pancreas, embryo E15.CNhs11042.1556-45F242.93
pancreas, embryo E16.CNhs11003.460-26E550.17
pancreas, embryo E17.CNhs10599.1558-45G373.83
pancreas, embryo E18.CNhs10580.1535-43I781.47
pancreas, neonate N00.CNhs11105.645-26G977.01
pancreas, neonate N01.CNhs11138.1531-43D755.62
pancreas, neonate N02.CNhs11139.1539-43D858.47
pancreas, neonate N16.CNhs11136.787-43B675.53
pancreas, neonate N25.CNhs11094.1555-45E249.55
pancreas, neonate N30.CNhs11182.1548-44H557.76
pituitary gland, adult.CNhs10493.21-1G8253.63
pituitary gland, embryo E12.CNhs11018.346-16E647.54
pituitary gland, embryo E13.CNhs11009.370-44C768.69
pituitary gland, embryo E14.CNhs11037.398-44A553.37
pituitary gland, embryo E15.CNhs10592.427-16B992.93
pituitary gland, embryo E16.CNhs11036.449-43F6125.39
pituitary gland, embryo E17.CNhs11039.1265-44F5140.52
pituitary gland, neonate N00.CNhs11190.1308-22E9258.80
placenta, adult pregnant day10.CNhs10472.539-13I745.29
placenta, adult pregnant day17.CNhs10464.577-18G391.09
prostate, adult.CNhs10470.859-1F8142.46
skin, adult.CNhs10492.30-1C3160.27
skin, neonate N00.CNhs11124.650-25G4105.92
skin, neonate N03.CNhs11215.662-22H364.60
skin, neonate N06.CNhs11097.693-20I567.68
skin, neonate N10.CNhs11108.762-6C461.88
small intestine, neonate N16.CNhs11114.790-21I154.22
spinal cord, adult.CNhs10505.24-13C9434.45
spleen, adult.CNhs10465.25-2G234.35
spleen, embryo E16.CNhs11035.461-43C147.68
spleen, embryo E18.CNhs11011.1271-21F244.63
spleen, neonate N10.CNhs11116.752-24D132.21
spleen, neonate N20.CNhs11112.824-19H137.59
spleen, neonate N25.CNhs11099.1354-25G337.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C637.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.80
stomach, adult.CNhs10503.33-1H6175.66
stomach, embryo E12.CNhs10588.356-43E343.18
stomach, embryo E15.CNhs10603.1252-16G862.22
stomach, embryo E16.CNhs11022.459-17D455.84
stomach, embryo E17.CNhs11006.1035-18D563.77
stomach, embryo E18.CNhs10999.1286-20C669.00
stomach, neonate N03.CNhs11193.1340-24B867.57
stomach, neonate N07.CNhs11210.718-18A987.28
stomach, neonate N25.CNhs11104.1355-25E465.18
stomach, neonate N30.CNhs11134.1386-42I158.59
submandibular gland, adult.CNhs10469.59-29C186.37
testis, adult.CNhs10504.57-7G552.42
testis, embryo E13.CNhs11031.389-23F545.60
testis, embryo E15.CNhs11034.443-27C536.24
testis, embryo E16.CNhs11033.470-26G559.70
testis, embryo E17.CNhs11029.486-18I541.07
testis, embryo E18.CNhs11027.503-18G562.68
testis, neonate N00.CNhs11189.1300-22B777.34
testis, neonate N07.CNhs11222.726-26I462.24
testis, neonate N10.CNhs11204.763-44D956.83
testis, neonate N20.CNhs11110.839-18H346.63
testis, neonate N30.CNhs11130.1391-42E247.24
thymus, adult.CNhs10471.38-12B558.78
thymus, embryo E14.CNhs11041.402-44I427.98
thymus, embryo E15.CNhs11005.430-45I236.77
thymus, embryo E16.CNhs11002.456-26C536.38
thymus, embryo E17.CNhs10581.478-18C147.80
thymus, embryo E18.CNhs10595.1273-19G453.45
thymus, neonate N02.CNhs11181.1541-43F842.43
thymus, neonate N03.CNhs11137.2104-43C741.21
thymus, neonate N06.CNhs11197.681-26C444.12
thymus, neonate N07.CNhs11211.713-19D349.08
thymus, neonate N10.CNhs11194.748-24E452.33
thymus, neonate N20.CNhs11186.820-7A252.63
thymus, neonate N25.CNhs11125.1362-25G757.82
thymus, neonate N30.CNhs11132.1393-42G267.20
tongue, adult.CNhs10499.32-1B4124.70
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.86
urinary bladder, adult.CNhs10481.879-12E4107.22
uterus, adult pregnant day19.CNhs10497.590-15F565.31
uterus, adult.CNhs10509.92-27E576.56
vagina, adult.CNhs10502.89-27D544.80
vesicular gland, adult.CNhs10491.51-27F8129.91
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11485.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21258.53
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31276.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7875.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4904.99
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5968.41
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6918.71
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71196.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81049.93
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91193.96
whole body, embryo E11.CNhs11014.324-5I836.43
whole body, embryo E12.CNhs10587.857-27C990.58
whole body, embryo E13.CNhs10512.372-23H269.66
whole body, embryo E14.5.CNhs10578.420-27D294.57
whole body, embryo E14.CNhs10519.395-14B198.73
whole body, embryo E16.CNhs10514.453-14F298.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5114.90
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5116.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5136.71
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5118.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5124.20
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5127.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5111.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5122.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5126.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5134.31
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5118.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5115.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5101.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5108.34
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5113.15
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5104.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5107.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5100.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5108.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G597.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5111.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5118.12
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G599.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G597.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5109.50
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5105.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G591.67
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5102.88
whole body, embryo E17.5.CNhs10513.490-9F9104.36
whole body, embryo E17.CNhs10517.475-3I5204.35
whole body, embryo E18.CNhs10516.493-3B3116.50
whole body, neonate N00.CNhs10525.657-19C2125.27
whole body, neonate N01.CNhs10576.659-23C6125.87
whole body, neonate N06.CNhs10515.692-21D1110.52
whole body, neonate N10.CNhs10518.761-6B498.08





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.13e-1223
neuroblast (sensu Vertebrata)4.13e-1223
neuron5.47e-1133
neuronal stem cell5.47e-1133
neuroblast5.47e-1133
electrically signaling cell5.47e-1133
ectodermal cell1.33e-1044
neurectodermal cell1.33e-1044
neural cell1.36e-1043
electrically responsive cell3.24e-0739
electrically active cell3.24e-0739

Uber anatomy
Ontology termp-valuen
central nervous system1.30e-2773
ectoderm-derived structure4.86e-2795
ectoderm4.86e-2795
presumptive ectoderm4.86e-2795
nervous system2.95e-2675
regional part of nervous system5.97e-2654
neurectoderm2.44e-2564
neural plate2.44e-2564
presumptive neural plate2.44e-2564
structure with developmental contribution from neural crest4.14e-2592
neural tube1.40e-2452
neural rod1.40e-2452
future spinal cord1.40e-2452
neural keel1.40e-2452
ecto-epithelium4.45e-2473
brain7.51e-2247
future brain7.51e-2247
regional part of brain4.26e-2146
gray matter2.15e-1934
pre-chordal neural plate9.69e-1949
anterior neural tube2.32e-1840
regional part of forebrain9.97e-1839
forebrain9.97e-1839
future forebrain9.97e-1839
brain grey matter1.12e-1629
regional part of telencephalon1.12e-1629
telencephalon1.12e-1629
cerebral cortex2.48e-1221
cerebral hemisphere2.48e-1221
pallium2.48e-1221
regional part of cerebral cortex1.18e-1017
anatomical conduit3.27e-08122
occipital lobe6.52e-0810
visual cortex6.52e-0810
neocortex6.52e-0810
tube2.90e-07114
posterior neural tube8.25e-0712
chordal neural plate8.25e-0712
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