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FFCP PHASE1:Mm9::chr5:135028323..135028346,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:135028323..135028346,-
|DHSsupport=NA
|short_description=p5@Clip2
|DPIdataset=NA
|description=CAGE_peak_5_at_Clip2_5end
|association_with_transcript=-19bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end
|EntrezGene=269713
|EntrezGene=269713
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9Z0H8
|UniProt=Q9Z0H8
|association_with_transcript=-19bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end
|cluster_id=chr5:135028323..135028346,-
|description=CAGE_peak_5_at_Clip2_5end
|id=chr5:135028323..135028346,-
|ontology_enrichment_celltype=CL:0000117!2.45e-15!23;CL:0000337!2.45e-15!23;CL:0000540!2.84e-14!33;CL:0000047!2.84e-14!33;CL:0000031!2.84e-14!33;CL:0000404!2.84e-14!33;CL:0002319!8.78e-11!43;CL:0000393!1.29e-10!39;CL:0000211!1.29e-10!39;CL:0000221!1.62e-10!44;CL:0000133!1.62e-10!44;CL:0000055!9.67e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.93e-27,23;CL:0000337,4.93e-27,23;CL:0000540,4.68e-22,33;CL:0000047,4.68e-22,33;CL:0000031,4.68e-22,33;CL:0000404,4.68e-22,33;CL:0002319,2.67e-17,43;CL:0000393,3.10e-17,39;CL:0000211,3.10e-17,39;CL:0000221,1.09e-16,44;CL:0000133,1.09e-16,44;CL:0002609,1.04e-08,6;CL:0002321,3.24e-07,70;CL:0000723,4.10e-07,91;CL:0000048,4.10e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.71e-16!75;UBERON:0001016!1.71e-16!75;UBERON:0001017!4.03e-16!73;UBERON:0005743!4.03e-16!73;UBERON:0002346!1.07e-13!71;UBERON:0003075!1.07e-13!71;UBERON:0007284!1.07e-13!71;UBERON:0004121!2.06e-13!102;UBERON:0000924!2.06e-13!102;UBERON:0006601!2.06e-13!102;UBERON:0000033!3.30e-13!63;UBERON:0003056!4.76e-13!49;UBERON:0001049!3.54e-12!52;UBERON:0005068!3.54e-12!52;UBERON:0006241!3.54e-12!52;UBERON:0007135!3.54e-12!52;UBERON:0000955!1.92e-11!50;UBERON:0006238!1.92e-11!50;UBERON:0002020!2.88e-11!34;UBERON:0002616!6.71e-11!49;UBERON:0003080!5.68e-10!40;UBERON:0000153!8.04e-10!94;UBERON:0002780!1.86e-09!39;UBERON:0001890!1.86e-09!39;UBERON:0006240!1.86e-09!39;UBERON:0007811!2.46e-09!86;UBERON:0002791!1.03e-08!29;UBERON:0003528!1.03e-08!29;UBERON:0001893!1.03e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.43e-23,73;UBERON:0004121,3.09e-22,95;UBERON:0000924,3.09e-22,95;UBERON:0006601,3.09e-22,95;UBERON:0001016,4.46e-22,75;UBERON:0002020,4.91e-22,34;UBERON:0002346,5.82e-20,64;UBERON:0003075,5.82e-20,64;UBERON:0007284,5.82e-20,64;UBERON:0003056,7.29e-20,49;UBERON:0000073,7.33e-20,54;UBERON:0003528,3.85e-17,29;UBERON:0002791,3.85e-17,29;UBERON:0001893,3.85e-17,29;UBERON:0010371,7.37e-17,73;UBERON:0001049,9.87e-17,52;UBERON:0005068,9.87e-17,52;UBERON:0006241,9.87e-17,52;UBERON:0007135,9.87e-17,52;UBERON:0003080,4.18e-15,40;UBERON:0002780,3.38e-14,39;UBERON:0001890,3.38e-14,39;UBERON:0006240,3.38e-14,39;UBERON:0000955,5.60e-14,47;UBERON:0006238,5.60e-14,47;UBERON:0002616,4.29e-13,46;UBERON:0010314,1.46e-11,92;UBERON:0002420,5.69e-10,8;UBERON:0007245,5.69e-10,8;UBERON:0010009,5.69e-10,8;UBERON:0010011,5.69e-10,8;UBERON:0000454,5.69e-10,8;UBERON:0000956,2.27e-09,21;UBERON:0001869,2.27e-09,21;UBERON:0000203,2.27e-09,21;UBERON:0000369,2.59e-07,5;UBERON:0002435,2.59e-07,5;UBERON:0000204,2.59e-07,5;UBERON:0010082,2.59e-07,5
|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,1.94204141212461,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,10.5204559646991,11.1088105647127,12.6766280701236,0.338844532069132,0,4.04954872776629,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,4.14758449233911,5.94026128659439,6.94072372459561,1.71390590642282,1.32521124570968,7.7169203505421,6.22995561618536,6.43453150627015,3.30347642998166,1.78762273319263,1.53606533256243,9.62769900430415,9.42322729104819,7.29278718779464,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,2.56269025438385,7.26957838718672,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0.359445373517761,0,0,2.69623150928681,1.83000241127451,3.5183218591602,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0.248813941220186,0,1.05220927943237,1.04096354370163,0.689706313300419,1.98068342785884,1.20563854268572,1.2246569847239,1.5373646434182,1.40552586839593,1.29351685369508,4.095791865724,1.13463648100692,0.527853372491847,0.876782929710299,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.268412837520744,1.05144974282064,2.57261530948211,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0,0.569003702859245,0.685491075658373,2.25415471346161,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,1.28440471990234,0.937693492737625,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,0,3.85585579706168,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.4229455216103,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0.304464949114599,1.17335854031855,4.44847348814022,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0.341741761595705,0,0.740778109478847,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.26534397432454,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.777804753376191,0.774958940866387,0,0.234714477291508,0.39061315453185,0.524296722128554,0,0,0.948033361884535,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0.79472541912506,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.487289403698762,0.769694733122636,0.350630706544707,0,0.665957860122194,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0,1.14579102687879,1.20297227640581,2.74033007908257,0,0.675022500231806,1.35096360967266,0,1.03552062350364,2.07574695168353,1.59609949360412,1.53660245178721,1.45864030240976,1.46729213839588,1.47074806760011,0.888986911206461,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.749132059759059,1.08842759088278,0.918967503289812,0,0.811190281613988,0.38581844092741,2.47251540481984,0.588795680537589,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,1.41164070622996,0.761531471025089,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.42362021749009,1.28055827088233,0.8184620863393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|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,1.94204141212461,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,10.5204559646991,11.1088105647127,12.6766280701236,0.338844532069132,0,4.04954872776629,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,4.14758449233911,5.94026128659439,6.94072372459561,1.71390590642282,1.32521124570968,7.7169203505421,6.22995561618536,6.43453150627015,3.30347642998166,1.78762273319263,1.53606533256243,9.62769900430415,9.42322729104819,7.29278718779464,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,2.56269025438385,7.26957838718672,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0.359445373517761,0,0,2.69623150928681,1.83000241127451,3.5183218591602,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0.248813941220186,0,1.05220927943237,1.04096354370163,0.689706313300419,1.98068342785884,1.20563854268572,1.2246569847239,1.5373646434182,1.40552586839593,1.29351685369508,4.095791865724,1.13463648100692,0.527853372491847,0.876782929710299,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.268412837520744,1.05144974282064,2.57261530948211,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0,0.569003702859245,0.685491075658373,2.25415471346161,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,1.28440471990234,0.937693492737625,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,0,3.85585579706168,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.4229455216103,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0.304464949114599,1.17335854031855,4.44847348814022,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0.341741761595705,0,0.740778109478847,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.26534397432454,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.777804753376191,0.774958940866387,0,0.234714477291508,0.39061315453185,0.524296722128554,0,0,0.948033361884535,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0.79472541912506,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.487289403698762,0.769694733122636,0.350630706544707,0,0.665957860122194,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0,1.14579102687879,1.20297227640581,2.74033007908257,0,0.675022500231806,1.35096360967266,0,1.03552062350364,2.07574695168353,1.59609949360412,1.53660245178721,1.45864030240976,1.46729213839588,1.47074806760011,0.888986911206461,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.749132059759059,1.08842759088278,0.918967503289812,0,0.811190281613988,0.38581844092741,2.47251540481984,0.588795680537589,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,1.41164070622996,0.761531471025089,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.42362021749009,1.28055827088233,0.8184620863393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|short_description=p5@Clip2
}}
}}

Latest revision as of 23:42, 1 October 2015

Short description:p5@Clip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Clip2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -19bp_to_ENSMUST00000036999, ENSMUST00000100647, NM_001039162, NM_009990, uc008zwi.1, uc008zwj.1_5end
EntrezGene:Clip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Clip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.43e-2373
ectoderm-derived structure3.09e-2295
ectoderm3.09e-2295
presumptive ectoderm3.09e-2295
nervous system4.46e-2275
gray matter4.91e-2234
neurectoderm5.82e-2064
neural plate5.82e-2064
presumptive neural plate5.82e-2064
pre-chordal neural plate7.29e-2049
regional part of nervous system7.33e-2054
brain grey matter3.85e-1729
regional part of telencephalon3.85e-1729
telencephalon3.85e-1729
ecto-epithelium7.37e-1773
neural tube9.87e-1752
neural rod9.87e-1752
future spinal cord9.87e-1752
neural keel9.87e-1752
anterior neural tube4.18e-1540
regional part of forebrain3.38e-1439
forebrain3.38e-1439
future forebrain3.38e-1439
brain5.60e-1447
future brain5.60e-1447
regional part of brain4.29e-1346
structure with developmental contribution from neural crest1.46e-1192
basal ganglion5.69e-108
nuclear complex of neuraxis5.69e-108
aggregate regional part of brain5.69e-108
collection of basal ganglia5.69e-108
cerebral subcortex5.69e-108
cerebral cortex2.27e-0921
cerebral hemisphere2.27e-0921
pallium2.27e-0921
corpus striatum2.59e-075
striatum2.59e-075
ventral part of telencephalon2.59e-075
future corpus striatum2.59e-075
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