FFCP PHASE1:Mm9::chr11:69373688..69373715,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:69373688..69373715,- to FFCP PHASE1:Mm9::chr11:69373688..69373715,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13643 | |EntrezGene=13643 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35393 | |UniProt=O35393 | ||
|association_with_transcript=0bp_to_ENSMUST00000004036_5end | |||
|cluster_id=chr11:69373688..69373715,- | |||
|description=CAGE_peak_2_at_Efnb3_5end | |||
|id=chr11:69373688..69373715,- | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-14!23;CL:0000337!1.96e-14!23;CL:0000540!6.93e-12!33;CL:0000047!6.93e-12!33;CL:0000031!6.93e-12!33;CL:0000404!6.93e-12!33;CL:0002319!8.56e-09!43;CL:0000221!9.31e-09!44;CL:0000133!9.31e-09!44;CL:0000393!2.12e-07!39;CL:0000211!2.12e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.88e-15,23;CL:0000337,3.88e-15,23;CL:0000540,4.58e-12,33;CL:0000047,4.58e-12,33;CL:0000031,4.58e-12,33;CL:0000404,4.58e-12,33;CL:0002319,1.07e-08,43;CL:0000221,1.15e-08,44;CL:0000133,1.15e-08,44;CL:0000393,5.92e-08,39;CL:0000211,5.92e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.24e-22!73;UBERON:0005743!1.24e-22!73;UBERON:0000073!6.28e-21!75;UBERON:0001016!6.28e-21!75;UBERON:0002346!9.12e-21!71;UBERON:0003075!9.12e-21!71;UBERON:0007284!9.12e-21!71;UBERON:0001049!1.46e-20!52;UBERON:0005068!1.46e-20!52;UBERON:0006241!1.46e-20!52;UBERON:0007135!1.46e-20!52;UBERON:0000033!5.02e-19!63;UBERON:0000955!8.09e-19!50;UBERON:0006238!8.09e-19!50;UBERON:0004121!1.80e-18!102;UBERON:0000924!1.80e-18!102;UBERON:0006601!1.80e-18!102;UBERON:0002616!2.67e-18!49;UBERON:0003056!1.40e-16!49;UBERON:0003080!6.71e-15!40;UBERON:0002780!2.67e-14!39;UBERON:0001890!2.67e-14!39;UBERON:0006240!2.67e-14!39;UBERON:0002020!4.63e-14!34;UBERON:0002791!5.00e-11!29;UBERON:0003528!5.00e-11!29;UBERON:0001893!5.00e-11!29;UBERON:0000153!4.32e-10!94;UBERON:0000025!9.93e-10!114;UBERON:0007811!1.99e-08!86;UBERON:0000468!2.90e-08!333;UBERON:0004111!3.48e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.20e-25,92;UBERON:0001017,5.40e-23,73;UBERON:0000073,4.22e-22,54;UBERON:0002346,9.55e-22,64;UBERON:0003075,9.55e-22,64;UBERON:0007284,9.55e-22,64;UBERON:0001016,1.83e-21,75;UBERON:0001049,4.95e-21,52;UBERON:0005068,4.95e-21,52;UBERON:0006241,4.95e-21,52;UBERON:0007135,4.95e-21,52;UBERON:0004121,1.07e-18,95;UBERON:0000924,1.07e-18,95;UBERON:0006601,1.07e-18,95;UBERON:0010371,2.49e-18,73;UBERON:0000955,2.01e-17,47;UBERON:0006238,2.01e-17,47;UBERON:0002616,6.83e-17,46;UBERON:0003056,7.01e-17,49;UBERON:0003080,4.30e-15,40;UBERON:0002780,1.82e-14,39;UBERON:0001890,1.82e-14,39;UBERON:0006240,1.82e-14,39;UBERON:0002020,4.64e-14,34;UBERON:0003528,6.63e-11,29;UBERON:0002791,6.63e-11,29;UBERON:0001893,6.63e-11,29;UBERON:0000025,8.85e-09,114;UBERON:0004111,2.92e-07,122;UBERON:0002420,6.16e-07,8;UBERON:0007245,6.16e-07,8;UBERON:0010009,6.16e-07,8;UBERON:0010011,6.16e-07,8;UBERON:0000454,6.16e-07,8 | |||
|phase1_expression=8.80818659076367,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,1.30815093828268,0.659058548203415,0.194429899074283,4.61955191363696,0,0,0,0,0,0,0,44.1049884673923,46.0222151966669,52.6080064910129,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,7.68436610643109,13.6870288247191,18.4958135514416,14.5124223332454,34.5637691128602,29.8172530284678,20.3334726696824,22.2361492762308,22.9804696652505,29.731287869835,22.2175968268227,27.9563890526363,49.3254716110925,64.315813452494,46.8822033501084,33.7811428791671,30.3891809417107,30.2540530598084,36.5339445987348,38.1556104541596,36.1614924901083,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,3.66192891419369,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,6.93941307064543,7.30717147949139,3.92046345335299,3.01445281105245,2.3517741427141,0.502666365318702,0,0.289198713839823,0,1.13236794963186,0.441683036920787,0,0,8.78342391034641,7.95897485891129,0.255457055208591,0,0,0,31.6058249144176,57.6450759551469,37.8219599859722,17.5562563394199,13.5529192385075,44.4666415357459,39.4246269254651,7.12875546952214,0.248813941220186,0.252722758433675,4.62972082950243,19.1277051155174,12.644615743841,11.884100567153,7.9873553452929,8.16437989815934,6.79002717509704,6.74652416830048,5.95017752699736,26.0837271448739,26.8530633838303,25.5129130037726,20.604398848192,14.7365042089567,6.96504333044333,4.32142486456681,10.5488161413801,0,0,0,30.8617401077898,27.2050229578072,25.0286265430811,25.8051761787879,25.1858216636677,24.2199367233184,20.2304531932855,21.1935987105699,19.1495161482158,32.2537305830422,12.8050621981694,13.2142159559745,12.2807989437279,9.22110484222413,10.1996878257883,29.2303028504137,50.2174508410908,0,0,10.2378360256912,7.19933682767359,5.02583099156164,4.03367049246685,4.66993892074228,1.71203063501303,0,2.9645811850322,2.76468729680296,2.18852119245266,1.55971269695296,0,0.216138049874694,0.199141273254367,6.44870863240478,3.77020091612105,7.88954149711563,4.2766778847516,3.87904974335251,3.64706263429657,2.08680572510049,0,0,0,0,1.66845105716094,1.37591296579242,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0,8.90609635321278,7.00749398700711,3.05541154395339,2.34690248288502,2.68010011906905,0.952174563544055,0.780534591431195,0.945810864637146,2.43611158613652,2.07291199254733,0,0.345369963731791,0,0,0,0,0.275936746304732,43.6697604766794,43.9543824720762,0,0.757412781613119,0.631016438832513,2.34263246577983,3.23135096599198,1.91175038362042,3.11918143715352,1.98153571552183,3.64329631507405,6.42962887404886,3.16230222357219,21.5285282002611,2.12910127812403,17.0942979520565,11.4020871547503,6.92874516484649,0,5.58395463156457,3.62788268357701,2.26326095707078,2.95301892880773,3.3817866273832,2.06742634534577,1.81766864738753,1.42598951353889,1.58018378967908,0,0,0,17.6459872150684,25.2249433376371,18.8616590827801,16.3153014950892,18.3719882130133,14.4803138129866,15.22324745573,0.23467170806371,0,0.441056796109924,0.32977250588296,2.74489525383039,1.68876189798836,1.67121281604391,0.492422699235184,0.291480836629851,63.4154532875943,0,4.74689796315412,1.66675074632741,0.188368457004691,0,0,0,0,0,0,12.0207677560831,5.89626454667861,4.75223499615926,3.76358932826044,2.83871332870031,2.02296519577231,1.90102948168273,0.26175594198403,0.129614973291793,0,1.12738587736838,5.83114529571517,8.60384150376908,8.36140109879405,7.8787492321416,7.60302564708502,6.92407708009948,2.21347454234715,3.25063967719704,2.17425708743405,0.864090018773596,0.316011120628178,3.85177909051312,1.64337531463724,0.909445760844565,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0,0,18.6368108063632,10.5874804396651,16.6139698897425,8.76451229952807,6.16574267793578,8.3093328712867,10.1253375034771,6.75481804836331,6.79713613476307,6.73088405277366,6.95375228813984,21.1483182902546,18.6099630272006,12.8846560046196,6.49800804146745,4.22840069435032,7.55638874525492,10.0957178047058,9.94849549734627,10.1078884705519,8.11133759648767,6.41329560712659,7.30403758265083,8.57937042225248,7.92609471587463,6.66811167796303,8.69132444586416,5.40145817298374,6.59337441285291,5.2991611248383,9.25746981440622,4.96932257246145,7.15308569841963,6.54058874845478,7.15231291156513,7.1922416707925,8.04883080640199,7.10288220882176,7.06181391998481,14.5896990631012,9.01626137743724,7.97886307242064,4.09231043169689,6.50734732981057,7.13754460630223,25.7304895276084,6.08222181958062,9.23945532407683,4.97349663378993,2.20591419119516,1.15933917810211 | |phase1_expression=8.80818659076367,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,1.30815093828268,0.659058548203415,0.194429899074283,4.61955191363696,0,0,0,0,0,0,0,44.1049884673923,46.0222151966669,52.6080064910129,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,7.68436610643109,13.6870288247191,18.4958135514416,14.5124223332454,34.5637691128602,29.8172530284678,20.3334726696824,22.2361492762308,22.9804696652505,29.731287869835,22.2175968268227,27.9563890526363,49.3254716110925,64.315813452494,46.8822033501084,33.7811428791671,30.3891809417107,30.2540530598084,36.5339445987348,38.1556104541596,36.1614924901083,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,3.66192891419369,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,6.93941307064543,7.30717147949139,3.92046345335299,3.01445281105245,2.3517741427141,0.502666365318702,0,0.289198713839823,0,1.13236794963186,0.441683036920787,0,0,8.78342391034641,7.95897485891129,0.255457055208591,0,0,0,31.6058249144176,57.6450759551469,37.8219599859722,17.5562563394199,13.5529192385075,44.4666415357459,39.4246269254651,7.12875546952214,0.248813941220186,0.252722758433675,4.62972082950243,19.1277051155174,12.644615743841,11.884100567153,7.9873553452929,8.16437989815934,6.79002717509704,6.74652416830048,5.95017752699736,26.0837271448739,26.8530633838303,25.5129130037726,20.604398848192,14.7365042089567,6.96504333044333,4.32142486456681,10.5488161413801,0,0,0,30.8617401077898,27.2050229578072,25.0286265430811,25.8051761787879,25.1858216636677,24.2199367233184,20.2304531932855,21.1935987105699,19.1495161482158,32.2537305830422,12.8050621981694,13.2142159559745,12.2807989437279,9.22110484222413,10.1996878257883,29.2303028504137,50.2174508410908,0,0,10.2378360256912,7.19933682767359,5.02583099156164,4.03367049246685,4.66993892074228,1.71203063501303,0,2.9645811850322,2.76468729680296,2.18852119245266,1.55971269695296,0,0.216138049874694,0.199141273254367,6.44870863240478,3.77020091612105,7.88954149711563,4.2766778847516,3.87904974335251,3.64706263429657,2.08680572510049,0,0,0,0,1.66845105716094,1.37591296579242,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0,8.90609635321278,7.00749398700711,3.05541154395339,2.34690248288502,2.68010011906905,0.952174563544055,0.780534591431195,0.945810864637146,2.43611158613652,2.07291199254733,0,0.345369963731791,0,0,0,0,0.275936746304732,43.6697604766794,43.9543824720762,0,0.757412781613119,0.631016438832513,2.34263246577983,3.23135096599198,1.91175038362042,3.11918143715352,1.98153571552183,3.64329631507405,6.42962887404886,3.16230222357219,21.5285282002611,2.12910127812403,17.0942979520565,11.4020871547503,6.92874516484649,0,5.58395463156457,3.62788268357701,2.26326095707078,2.95301892880773,3.3817866273832,2.06742634534577,1.81766864738753,1.42598951353889,1.58018378967908,0,0,0,17.6459872150684,25.2249433376371,18.8616590827801,16.3153014950892,18.3719882130133,14.4803138129866,15.22324745573,0.23467170806371,0,0.441056796109924,0.32977250588296,2.74489525383039,1.68876189798836,1.67121281604391,0.492422699235184,0.291480836629851,63.4154532875943,0,4.74689796315412,1.66675074632741,0.188368457004691,0,0,0,0,0,0,12.0207677560831,5.89626454667861,4.75223499615926,3.76358932826044,2.83871332870031,2.02296519577231,1.90102948168273,0.26175594198403,0.129614973291793,0,1.12738587736838,5.83114529571517,8.60384150376908,8.36140109879405,7.8787492321416,7.60302564708502,6.92407708009948,2.21347454234715,3.25063967719704,2.17425708743405,0.864090018773596,0.316011120628178,3.85177909051312,1.64337531463724,0.909445760844565,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0,0,18.6368108063632,10.5874804396651,16.6139698897425,8.76451229952807,6.16574267793578,8.3093328712867,10.1253375034771,6.75481804836331,6.79713613476307,6.73088405277366,6.95375228813984,21.1483182902546,18.6099630272006,12.8846560046196,6.49800804146745,4.22840069435032,7.55638874525492,10.0957178047058,9.94849549734627,10.1078884705519,8.11133759648767,6.41329560712659,7.30403758265083,8.57937042225248,7.92609471587463,6.66811167796303,8.69132444586416,5.40145817298374,6.59337441285291,5.2991611248383,9.25746981440622,4.96932257246145,7.15308569841963,6.54058874845478,7.15231291156513,7.1922416707925,8.04883080640199,7.10288220882176,7.06181391998481,14.5896990631012,9.01626137743724,7.97886307242064,4.09231043169689,6.50734732981057,7.13754460630223,25.7304895276084,6.08222181958062,9.23945532407683,4.97349663378993,2.20591419119516,1.15933917810211 | ||
|short_description=p2@Efnb3 | |||
}} | }} |
Latest revision as of 00:20, 2 October 2015
Short description: | p2@Efnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Efnb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000004036_5end |
EntrezGene: | Efnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.88e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.88e-15 | 23 |
neuron | 4.58e-12 | 33 |
neuronal stem cell | 4.58e-12 | 33 |
neuroblast | 4.58e-12 | 33 |
electrically signaling cell | 4.58e-12 | 33 |
neural cell | 1.07e-08 | 43 |
ectodermal cell | 1.15e-08 | 44 |
neurectodermal cell | 1.15e-08 | 44 |
electrically responsive cell | 5.92e-08 | 39 |
electrically active cell | 5.92e-08 | 39 |