FFCP PHASE1:Mm9::chr16:41533026..41533085,+: Difference between revisions
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{{FFCP|EntrezGene=268890|HGNC=|MCL_coexpression_id=1|UniProt=Q8BLK3|association_with_transcript=55bp_to_ENSMUST00000078873_5end|description=CAGE_peak_3_at_Lsamp_5end|id=chr16:41533026..41533085,+|ontology_enrichment_celltype=CL:0000117!5.76e-13!23;CL:0000337!5.76e-13!23;CL:0000540!6.71e-13!33;CL:0000047!6.71e-13!33;CL:0000031!6.71e-13!33;CL:0000404!6.71e-13!33;CL:0000221!4.83e-11!44;CL:0000133!4.83e-11!44;CL:0002319!1.36e-10!43;CL:0000393!2.66e-09!39;CL:0000211!2.66e-09!39;CL:0000055!1.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-15,23;CL:0000337,1.15e-15,23;CL:0000540,1.47e-14,33;CL:0000047,1.47e-14,33;CL:0000031,1.47e-14,33;CL:0000404,1.47e-14,33;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0002319,4.90e-11,43;CL:0000393,1.53e-10,39;CL:0000211,1.53e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-29!73;UBERON:0005743!1.13e-29!73;UBERON:0000073!3.08e-28!75;UBERON:0001016!3.08e-28!75;UBERON:0004121!4.20e-28!102;UBERON:0000924!4.20e-28!102;UBERON:0006601!4.20e-28!102;UBERON:0002346!2.76e-27!71;UBERON:0003075!2.76e-27!71;UBERON:0007284!2.76e-27!71;UBERON:0000033!4.09e-26!63;UBERON:0001049!1.70e-24!52;UBERON:0005068!1.70e-24!52;UBERON:0006241!1.70e-24!52;UBERON:0007135!1.70e-24!52;UBERON:0000955!5.21e-23!50;UBERON:0006238!5.21e-23!50;UBERON:0003056!1.52e-22!49;UBERON:0002616!1.92e-22!49;UBERON:0003080!1.14e-18!40;UBERON:0002020!4.31e-18!34;UBERON:0002780!6.01e-18!39;UBERON:0001890!6.01e-18!39;UBERON:0006240!6.01e-18!39;UBERON:0002791!9.24e-15!29;UBERON:0003528!9.24e-15!29;UBERON:0001893!9.24e-15!29;UBERON:0000153!1.60e-13!94;UBERON:0007811!1.45e-12!86;UBERON:0000956!2.22e-10!21;UBERON:0001869!2.22e-10!21;UBERON:0000203!2.22e-10!21;UBERON:0002619!3.39e-09!17;UBERON:0002021!5.02e-08!10;UBERON:0000411!5.02e-08!10;UBERON:0001950!5.02e-08!10;UBERON:0000468!1.22e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-33,73;UBERON:0002346,7.47e-33,64;UBERON:0003075,7.47e-33,64;UBERON:0007284,7.47e-33,64;UBERON:0001016,8.65e-32,75;UBERON:0004121,1.46e-31,95;UBERON:0000924,1.46e-31,95;UBERON:0006601,1.46e-31,95;UBERON:0000073,1.98e-30,54;UBERON:0010371,3.58e-29,73;UBERON:0001049,1.42e-28,52;UBERON:0005068,1.42e-28,52;UBERON:0006241,1.42e-28,52;UBERON:0007135,1.42e-28,52;UBERON:0003056,7.37e-26,49;UBERON:0000955,3.24e-24,47;UBERON:0006238,3.24e-24,47;UBERON:0002616,1.55e-23,46;UBERON:0003080,4.40e-21,40;UBERON:0002020,9.07e-21,34;UBERON:0002780,3.30e-20,39;UBERON:0001890,3.30e-20,39;UBERON:0006240,3.30e-20,39;UBERON:0010314,5.72e-18,92;UBERON:0003528,1.07e-16,29;UBERON:0002791,1.07e-16,29;UBERON:0001893,1.07e-16,29;UBERON:0000956,2.43e-11,21;UBERON:0001869,2.43e-11,21;UBERON:0000203,2.43e-11,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0003076,6.58e-08,12;UBERON:0003057,6.58e-08,12|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,13.3528864167335,14.8117474196169,13.9442908771359,0,0,0,0,0,4.79360176829448,6.53171119046643,2.7996195323289,3.78016627328734,3.36519938162211,22.2807767834967,24.2955395046775,8.45186514583183,5.46319184803947,3.67687514644008,30.8324466798288,16.7270412891596,14.8998337258556,12.3973110466382,12.5338071735301,13.022834263919,12.8424179540635,23.6360296213306,14.9742282821274,32.7037729875771,20.3591503542717,10.9975673036927,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,10.9857867425811,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.940709657085638,0.251333182659351,0,0,0,0,0.220841518460394,0,0,24.59358694897,24.5052646971742,0.255457055208591,0,0,0,23.9665023047716,13.7250180845588,9.1727677042391,15.9918374576894,22.5029602450691,16.4152555202052,22.7137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.47309299120532,3.3831315170303,4.82794419310293,7.38254732201932,8.74087943447147,12.9949713379036,11.2740073850668,7.49613796477831,11.6416516832557,0.862271971731369,4.16033376369202,4.39877810409872,1.7535658594206,3.33656699070717,2.089512999133,1.23469281844766,4.17971960318836,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.439100230582101,0.268412837520744,10.9350773253346,16.0531195311684,0,0,2.98603550749328,2.09013004674395,2.44848176511977,1.4117846723634,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.19496408711912,0,0,0.199141273254367,1.13800740571849,2.85621281524322,2.25415471346161,2.64746726198909,0.775809948670503,0.841629838683823,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268890 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLK3 | |||
|association_with_transcript=55bp_to_ENSMUST00000078873_5end | |||
|cluster_id=chr16:41533026..41533085,+ | |||
|description=CAGE_peak_3_at_Lsamp_5end | |||
|id=chr16:41533026..41533085,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.76e-13!23;CL:0000337!5.76e-13!23;CL:0000540!6.71e-13!33;CL:0000047!6.71e-13!33;CL:0000031!6.71e-13!33;CL:0000404!6.71e-13!33;CL:0000221!4.83e-11!44;CL:0000133!4.83e-11!44;CL:0002319!1.36e-10!43;CL:0000393!2.66e-09!39;CL:0000211!2.66e-09!39;CL:0000055!1.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-15,23;CL:0000337,1.15e-15,23;CL:0000540,1.47e-14,33;CL:0000047,1.47e-14,33;CL:0000031,1.47e-14,33;CL:0000404,1.47e-14,33;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0002319,4.90e-11,43;CL:0000393,1.53e-10,39;CL:0000211,1.53e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-29!73;UBERON:0005743!1.13e-29!73;UBERON:0000073!3.08e-28!75;UBERON:0001016!3.08e-28!75;UBERON:0004121!4.20e-28!102;UBERON:0000924!4.20e-28!102;UBERON:0006601!4.20e-28!102;UBERON:0002346!2.76e-27!71;UBERON:0003075!2.76e-27!71;UBERON:0007284!2.76e-27!71;UBERON:0000033!4.09e-26!63;UBERON:0001049!1.70e-24!52;UBERON:0005068!1.70e-24!52;UBERON:0006241!1.70e-24!52;UBERON:0007135!1.70e-24!52;UBERON:0000955!5.21e-23!50;UBERON:0006238!5.21e-23!50;UBERON:0003056!1.52e-22!49;UBERON:0002616!1.92e-22!49;UBERON:0003080!1.14e-18!40;UBERON:0002020!4.31e-18!34;UBERON:0002780!6.01e-18!39;UBERON:0001890!6.01e-18!39;UBERON:0006240!6.01e-18!39;UBERON:0002791!9.24e-15!29;UBERON:0003528!9.24e-15!29;UBERON:0001893!9.24e-15!29;UBERON:0000153!1.60e-13!94;UBERON:0007811!1.45e-12!86;UBERON:0000956!2.22e-10!21;UBERON:0001869!2.22e-10!21;UBERON:0000203!2.22e-10!21;UBERON:0002619!3.39e-09!17;UBERON:0002021!5.02e-08!10;UBERON:0000411!5.02e-08!10;UBERON:0001950!5.02e-08!10;UBERON:0000468!1.22e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-33,73;UBERON:0002346,7.47e-33,64;UBERON:0003075,7.47e-33,64;UBERON:0007284,7.47e-33,64;UBERON:0001016,8.65e-32,75;UBERON:0004121,1.46e-31,95;UBERON:0000924,1.46e-31,95;UBERON:0006601,1.46e-31,95;UBERON:0000073,1.98e-30,54;UBERON:0010371,3.58e-29,73;UBERON:0001049,1.42e-28,52;UBERON:0005068,1.42e-28,52;UBERON:0006241,1.42e-28,52;UBERON:0007135,1.42e-28,52;UBERON:0003056,7.37e-26,49;UBERON:0000955,3.24e-24,47;UBERON:0006238,3.24e-24,47;UBERON:0002616,1.55e-23,46;UBERON:0003080,4.40e-21,40;UBERON:0002020,9.07e-21,34;UBERON:0002780,3.30e-20,39;UBERON:0001890,3.30e-20,39;UBERON:0006240,3.30e-20,39;UBERON:0010314,5.72e-18,92;UBERON:0003528,1.07e-16,29;UBERON:0002791,1.07e-16,29;UBERON:0001893,1.07e-16,29;UBERON:0000956,2.43e-11,21;UBERON:0001869,2.43e-11,21;UBERON:0000203,2.43e-11,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0003076,6.58e-08,12;UBERON:0003057,6.58e-08,12 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,13.3528864167335,14.8117474196169,13.9442908771359,0,0,0,0,0,4.79360176829448,6.53171119046643,2.7996195323289,3.78016627328734,3.36519938162211,22.2807767834967,24.2955395046775,8.45186514583183,5.46319184803947,3.67687514644008,30.8324466798288,16.7270412891596,14.8998337258556,12.3973110466382,12.5338071735301,13.022834263919,12.8424179540635,23.6360296213306,14.9742282821274,32.7037729875771,20.3591503542717,10.9975673036927,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,10.9857867425811,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.940709657085638,0.251333182659351,0,0,0,0,0.220841518460394,0,0,24.59358694897,24.5052646971742,0.255457055208591,0,0,0,23.9665023047716,13.7250180845588,9.1727677042391,15.9918374576894,22.5029602450691,16.4152555202052,22.7137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.47309299120532,3.3831315170303,4.82794419310293,7.38254732201932,8.74087943447147,12.9949713379036,11.2740073850668,7.49613796477831,11.6416516832557,0.862271971731369,4.16033376369202,4.39877810409872,1.7535658594206,3.33656699070717,2.089512999133,1.23469281844766,4.17971960318836,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.439100230582101,0.268412837520744,10.9350773253346,16.0531195311684,0,0,2.98603550749328,2.09013004674395,2.44848176511977,1.4117846723634,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.19496408711912,0,0,0.199141273254367,1.13800740571849,2.85621281524322,2.25415471346161,2.64746726198909,0.775809948670503,0.841629838683823,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,14.6101036888891,20.9808919000044,0,0.252470927204373,1.57754109708128,0.390438744296638,1.29254038639679,1.43381278771531,3.34198011123591,2.54768877709949,1.61924280669958,0.584511715822624,1.18586333383957,11.8888887076069,0.567760340833074,0.890328018336276,1.30309567482861,3.29940245945071,0,2.42780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,4.32146625675145,3.23396709456886,6.21577401591618,4.78818630834139,3.74574516964348,4.27827453565514,3.04464949114599,0,0,0.220528398054962,0.16488625294148,1.13025098687134,0.542816324353403,0.596861720015682,0.820704498725306,0,13.9068976507882,0,3.714963623338,2.40752885580625,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,2.48412283890143,2.09088296014469,2.18362563746178,1.21377911746339,0.661227645802687,0.785267825952089,0,0,0,0,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.821500670520278,0.781226309063701,0.209718688851422,0,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0.537080087002444,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.56412273974171,0.643105137237198,0,32.1908550291728,27.6195141904306,32.6550442660456,23.5438859810852,15.7568979547248,20.3956352295219,16.8755625057951,17.5625269257446,20.3914084042892,21.7459330935764,1.55681021376265,6.3843979744165,5.80494259564056,2.43106717068294,0.838452650511929,0.551530525350042,3.11145418922261,3.7086310303001,4.1719497246936,4.29585259998456,3.04175159868288,4.71565853465191,3.83930180626518,3.71345883948242,3.27382173046996,1.90517476513229,3.70829843023538,2.89363830695558,5.35711671044299,4.26876868389752,2.40008476669791,3.72699192934609,4.5302876089991,3.48831399917588,3.67026583619789,3.89227196301712,2.92684756596436,3.6829759601298,4.75314398460516,2.80571135828869,4.38949567059444,3.74317033027141,2.86461730218783,2.47898945897546,3.08650577569826,3.74715866906919,3.74290573512653,2.36358159453128,1.91288332068843,1.76473135295612,0.695603506861264 | |||
|short_description=p3@Lsamp | |||
}} |
Latest revision as of 00:26, 2 October 2015
Short description: | p3@Lsamp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lsamp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 55bp_to_ENSMUST00000078873_5end |
EntrezGene: | Lsamp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-15 | 23 |
neuron | 1.47e-14 | 33 |
neuronal stem cell | 1.47e-14 | 33 |
neuroblast | 1.47e-14 | 33 |
electrically signaling cell | 1.47e-14 | 33 |
ectodermal cell | 1.44e-11 | 44 |
neurectodermal cell | 1.44e-11 | 44 |
neural cell | 4.90e-11 | 43 |
electrically responsive cell | 1.53e-10 | 39 |
electrically active cell | 1.53e-10 | 39 |