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FFCP PHASE1:Mm9::chrX:72341224..72341261,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245474
|EntrezGene=245474
|HGNC=
|HGNC=
|MCL_coexpression_id=361
|TSSclassifier=NA
|UniProt=Q9ESX5
|UniProt=Q9ESX5
|association_with_transcript=31bp_to_ENSMUST00000033776,NM_001030307,uc009tpo.2_5end
|association_with_transcript=31bp_to_ENSMUST00000033776,NM_001030307,uc009tpo.2_5end
|cluster_id=chrX:72341224..72341261,+
|description=CAGE_peak_2_at_Dkc1_5end
|description=CAGE_peak_2_at_Dkc1_5end
|id=chrX:72341224..72341261,+
|id=chrX:72341224..72341261,+
|ontology_enrichment_celltype=CL:0000117!9.30e-11!23;CL:0000337!9.30e-11!23;CL:0000540!1.77e-08!33;CL:0000047!1.77e-08!33;CL:0000031!1.77e-08!33;CL:0000404!1.77e-08!33
|ontology_enrichment_celltype=CL:0000117!9.30e-11!23;CL:0000337!9.30e-11!23;CL:0000540!1.77e-08!33;CL:0000047!1.77e-08!33;CL:0000031!1.77e-08!33;CL:0000404!1.77e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-11,23;CL:0000337,4.99e-11,23;CL:0000540,1.44e-08,33;CL:0000047,1.44e-08,33;CL:0000031,1.44e-08,33;CL:0000404,1.44e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.31e-22!63;UBERON:0002346!1.23e-21!71;UBERON:0003075!1.23e-21!71;UBERON:0007284!1.23e-21!71;UBERON:0003056!1.91e-19!49;UBERON:0001049!2.14e-19!52;UBERON:0005068!2.14e-19!52;UBERON:0006241!2.14e-19!52;UBERON:0007135!2.14e-19!52;UBERON:0000955!3.22e-19!50;UBERON:0006238!3.22e-19!50;UBERON:0002616!1.37e-18!49;UBERON:0001017!2.05e-18!73;UBERON:0005743!2.05e-18!73;UBERON:0004121!2.66e-18!102;UBERON:0000924!2.66e-18!102;UBERON:0006601!2.66e-18!102;UBERON:0000073!1.63e-17!75;UBERON:0001016!1.63e-17!75;UBERON:0003080!1.04e-15!40;UBERON:0002020!4.48e-15!34;UBERON:0002780!4.92e-15!39;UBERON:0001890!4.92e-15!39;UBERON:0006240!4.92e-15!39;UBERON:0000153!9.58e-15!94;UBERON:0007811!9.36e-14!86;UBERON:0002791!3.02e-13!29;UBERON:0003528!3.02e-13!29;UBERON:0001893!3.02e-13!29;UBERON:0004111!5.50e-12!122;UBERON:0000025!1.96e-11!114;UBERON:0000956!4.09e-09!21;UBERON:0001869!4.09e-09!21;UBERON:0000203!4.09e-09!21;UBERON:0000468!1.42e-08!333;UBERON:0002619!1.04e-07!17;UBERON:0000475!1.47e-07!200;UBERON:0000477!9.91e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.79e-24,64;UBERON:0003075,6.79e-24,64;UBERON:0007284,6.79e-24,64;UBERON:0010314,9.80e-24,92;UBERON:0010371,3.14e-22,73;UBERON:0000073,3.97e-21,54;UBERON:0001049,7.04e-20,52;UBERON:0005068,7.04e-20,52;UBERON:0006241,7.04e-20,52;UBERON:0007135,7.04e-20,52;UBERON:0003056,1.05e-19,49;UBERON:0004121,3.74e-19,95;UBERON:0000924,3.74e-19,95;UBERON:0006601,3.74e-19,95;UBERON:0001017,5.94e-19,73;UBERON:0001016,6.68e-18,75;UBERON:0000955,7.80e-18,47;UBERON:0006238,7.80e-18,47;UBERON:0002616,3.34e-17,46;UBERON:0003080,7.24e-16,40;UBERON:0002020,1.79e-15,34;UBERON:0002780,3.57e-15,39;UBERON:0001890,3.57e-15,39;UBERON:0006240,3.57e-15,39;UBERON:0003528,1.37e-13,29;UBERON:0002791,1.37e-13,29;UBERON:0001893,1.37e-13,29;UBERON:0004111,1.72e-11,122;UBERON:0000025,4.62e-11,114;UBERON:0000956,2.45e-09,21;UBERON:0001869,2.45e-09,21;UBERON:0000203,2.45e-09,21;UBERON:0002619,6.86e-08,17
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|phase1_expression=3.52327463630547,0,0,0,0,0.33575854382378,0.467225281191051,0.774739940649458,0.563154888606667,0.936258105287974,0.513653904676515,0.159544317990673,0.856003649656029,0.874204024189974,0.333109761815663,0.404950534779652,1.39912375625629,1.10411757875383,1.7824876368746,1.69755860719212,2.63634199468316,0.496454756004426,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.997407872150954,0,0.418531630736908,0.7813353445238,0,0,1.36609096991689,0,0.377690453926732,0.811015449756117,0.734187008646726,0,1.96222640742402,1.09843091367236,1.74986909166855,1.39986421625363,1.43752564364972,1.00669563634642,2.17608642603403,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,4.24864567805155,3.70293685490423,3.1691570175309,0,0.889294796111139,0,0,0,0,0.384218305321555,3.83651565541367,3.64516033495565,2.73422449756797,4.57041575046086,2.87129103237098,3.79721477566358,4.50473713785711,4.5960939330501,4.40463523997555,7.2781782708557,7.68032666281217,4.48413378282659,4.84884511092771,4.16730696445408,4.4669279840221,5.6276261003168,7.33431589328689,5.00868595305235,5.12538050876771,2.79599168737951,1.51452386666368,0.68014404096107,0.869593466105033,3.44169550792555,0.679971333707751,0,0.649776417447669,0.448026887097336,2.38755514223978,0.681721290312231,0.259786004602869,0,2.53518155598025,0,0,0,0.865964164044856,0,0.505524445014783,0.79928715803342,1.03575153458869,3.41416919849097,1.90833859442749,0.913396434936424,0.691846491768175,1.80867168663147,2.82212897125692,1.50799909595611,0.494389935468748,3.18118585223806,0,2.91180329905337,1.98757366614354,2.42437626567611,0,11.4184510834503,5.44561437714983,0.255457055208591,1.07833612055328,0.599902730993408,0,9.43681028250383,7.32000964509802,4.64921102817598,7.12679712788333,4.34716277461562,6.64921742590592,7.13861557498134,2.34230536855727,2.23932547098167,2.27450482590307,1.89397670297827,3.6433724029557,3.44853156650209,3.60124259610698,5.57607825992146,6.12328492361951,5.89323113310309,5.34099829990454,4.9153640440413,5.38919982332106,2.83659120251729,2.46331573829528,2.41115305670332,3.61461423993277,2.43776516565517,1.85203922767149,3.18454826909589,0,1.02939162845886,0.568326998791185,2.48550927042602,3.98694301967864,3.96136535214233,2.3674473558521,2.55793501271625,4.31947916084659,2.79040733700489,3.21928081679543,2.21854150497622,2.46839774870221,2.46251196118643,2.91847714365081,3.50879969820798,1.97595103761946,3.48936688776967,8.20130799400096,4.73361216944708,0,0,1.91959425481711,1.62565670302307,1.41754207454303,2.01683524623343,1.33426826306922,0.951128130562796,0.474529061544512,1.4822905925161,0.502670417600539,0.994782360205754,2.33956904542944,0,0.216138049874694,0.398282546508734,1.51734320762465,2.85621281524322,1.1270773567308,3.66572390121566,3.49114476901726,2.45475369616115,3.28829993046138,2.80459281161244,2.19798218977925,1.1105744752962,1.1858105083486,1.16791574001266,0.786235980452812,0.899448449539415,1.01430060694251,0,1.2731292589071,1.15078454980324,0.162135226775035,0,0,0.744281895337007,0.312037673114561,1.51547326768267,0.538192240565737,0.964887042726734,3.32555742299888,1.32643988239339,1.95557971730431,1.86719594352707,3.75504397261603,3.01511263395268,1.42826184531608,2.53673742215138,1.7339865851681,3.98636441367795,2.55127629851979,4.42430949732493,3.28101465545202,3.18227928879325,0,0,1.96705709207614,2.48343071674259,7.06422595946285,6.21221938938677,0.655739781506702,1.26235463602186,1.57754109708128,2.73307121007647,2.80050417052639,0.477937595905104,0.222798674082394,1.69845918473299,0.809621403349789,2.63030272120181,3.16230222357219,6.42642632843614,2.55492153374884,1.78065603667255,3.4206261464251,3.46437258242324,0,1.94224508923985,1.209294227859,1.69744571780308,0.295301892880773,1.22974059177571,1.80899805217755,1.09060118843252,3.20847640546249,2.84433082142234,2.10837217149998,2.06271086496374,9.19186935535228,2.88097750450096,0.905510786479282,2.35770738534752,3.72414490648775,3.56737635204141,3.29098041204242,1.522324745573,1.64270195644597,0.63549621259146,3.52845436887939,2.14352128823924,1.29171541356724,1.93001359770099,1.3130957840345,0.984845398470368,0.582961673259701,6.30446026835733,1.36696704638282,0.82554747185289,1.11116716421827,1.13021074202815,1.50363650493128,1.60144721244566,0.509935289981566,1.11961161858926,0.690999869022119,0.954670618015114,2.37251995185852,1.42323626988794,1.08005340821801,1.25452977608681,0.436725127492355,1.75323650300267,0.991841468704031,0.523511883968059,0.518459893167171,0.621339313086926,0.56369293868419,4.9340460194513,2.81279433777066,2.33341426012857,1.54991788173277,3.04121025883401,2.46450201156083,2.8644964665669,4.50895181030557,0.966336483304024,1.44015003128933,0.948033361884535,1.62180172232131,2.46506297195585,1.03936658382236,2.32734704367726,1.39076948346885,1.80293174279953,2.51072196196781,2.1202954489111,1.600342939755,2.72230699869469,1.94915761479505,1.15454209968395,1.75315353272353,2.0405734525369,2.44184548711471,3.49884040776955,2.18250001273302,2.12508553435409,1.68914227906064,1.46521299413812,0.643105137237198,5.01572104035363,4.51801474093653,3.68260189205742,2.29158205375759,9.28007184655913,12.3314853558716,5.2877572817279,8.77529250301348,6.75481804836331,9.9691329976525,10.3552062350364,2.49089634202024,1.59609949360412,1.19513524027894,1.94485373654635,2.09613162627982,2.38996560985018,3.11145418922261,2.88449080134452,3.20919209591815,1.26348605881899,2.02783439912192,1.13175804831646,1.77918864192777,2.56100609619477,2.46972516509137,2.85776214769844,1.73826488917283,3.27945674788299,3.29668720642645,3.09117732282234,0.685738504770831,2.12970967391205,2.14592570952589,2.47088908274958,1.97629698872194,1.35383372626682,2.37806364734604,2.10455769150274,1.62964936615034,3.92799590160417,1.66089025373844,2.36410757701352,1.22769312950907,2.32405261778949,1.73615949883027,2.24829520144151,2.33931608445408,2.36358159453128,3.06061331310149,1.98532277207564,2.55054619182464
|short_description=p2@Dkc1
|short_description=p2@Dkc1
}}
}}

Latest revision as of 00:27, 2 October 2015

Short description:p2@Dkc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dkc1_5end
Coexpression cluster:MCL_coexpression_mm9:361
Association with transcript: 31bp_to_ENSMUST00000033776, NM_001030307, uc009tpo.2_5end
EntrezGene:Dkc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dkc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C66.12
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.99e-1123
neuroblast (sensu Vertebrata)4.99e-1123
neuron1.44e-0833
neuronal stem cell1.44e-0833
neuroblast1.44e-0833
electrically signaling cell1.44e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm6.79e-2464
neural plate6.79e-2464
presumptive neural plate6.79e-2464
structure with developmental contribution from neural crest9.80e-2492
ecto-epithelium3.14e-2273
regional part of nervous system3.97e-2154
neural tube7.04e-2052
neural rod7.04e-2052
future spinal cord7.04e-2052
neural keel7.04e-2052
pre-chordal neural plate1.05e-1949
ectoderm-derived structure3.74e-1995
ectoderm3.74e-1995
presumptive ectoderm3.74e-1995
central nervous system5.94e-1973
nervous system6.68e-1875
brain7.80e-1847
future brain7.80e-1847
regional part of brain3.34e-1746
anterior neural tube7.24e-1640
gray matter1.79e-1534
regional part of forebrain3.57e-1539
forebrain3.57e-1539
future forebrain3.57e-1539
brain grey matter1.37e-1329
regional part of telencephalon1.37e-1329
telencephalon1.37e-1329
anatomical conduit1.72e-11122
tube4.62e-11114
cerebral cortex2.45e-0921
cerebral hemisphere2.45e-0921
pallium2.45e-0921
regional part of cerebral cortex6.86e-0817
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