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{{f5samples
{{f5samples
|id=FF:11355-117H5
|DRA_sample_Accession=CAGE@SAMD00005834
|name=Placental Epithelial Cells, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005834
|sample_id=11355
|accession_numbers=CAGE;DRX008405;DRR009277;DRZ000702;DRZ002087;DRZ012052;DRZ013437
|rna_tube_id=117H5
|accession_numbers_RNASeq=sRNA-Seq;DRX037087;DRR041453;DRZ007095
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001987,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000478,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_position=H5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000349,CL:0000255,CL:0002577
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=2544
|rna_catalog_number=CA230-R10f
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=placenta
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=placental epithelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs11386,LSID771,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10006,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000349,CL:0000548,CL:0002371,CL:0002577
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000136
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr5:153857778..153857794,-!p1@HAND1!2.20!156.45!HAND1;;chr2:19558373..19558392,-!p1@OSR1!2.04!282.94!OSR1;;chr19:46801639..46801699,+!p1@HIF3A!1.93!83.22!HIF3A;;chr10:8096631..8096660,+!p1@GATA3!1.91!96.53!GATA3;;chr10:8096772..8096787,+!p2@GATA3!1.84!79.89!GATA3;;chr3:111314186..111314204,-!p1@ZBED2!1.81!63.25!ZBED2;;chr16:31076332..31076388,-!p3@ZNF668!1.61!39.94!ZNF668;;chr19:46800289..46800327,+!p2@HIF3A!1.61!39.94!HIF3A;;chr8:102504651..102504683,+!p1@GRHL2!1.59!38.28!GRHL2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.59!38.28!ZBED1;;chr8:49833948..49833973,-!p2@SNAI2!1.55!209.71!SNAI2;;chr11:46299199..46299233,+!p1@CREB3L1!1.54!166.44!CREB3L1;;chr5:2751762..2751784,-!p1@IRX2!1.51!31.62!IRX2;;chr4:174450089..174450153,-!p2@HAND2!1.51!31.62!HAND2;;chr14:75988771..75988826,+!p1@BATF!1.48!38.28!BATF;;chr5:153857800..153857812,-!p2@HAND1!1.47!28.29!HAND1;;chr1:6479968..6479986,-!p1@HES2!1.47!28.29!HES2;;chr6:10415276..10415341,-!p2@TFAP2A!1.43!31.62!TFAP2A;;chr5:3595977..3595999,+!p1@IRX1!1.41!24.97!IRX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.40!39.94!TFAP2A;;chr1:209979467..209979494,-!p1@IRF6!1.39!26.63!IRF6;;chr8:49833978..49833996,-!p1@SNAI2!1.36!429.40!SNAI2;;chr5:3595934..3595957,+!p2@IRX1!1.35!21.64!IRX1;;chr4:174451370..174451387,-!p1@HAND2!1.35!21.64!HAND2;;chr11:46299539..46299620,+!p2@CREB3L1!1.32!33.29!CREB3L1;;chr5:3595961..3595975,+!p3@IRX1!1.29!18.31!IRX1;;chr8:102504979..102505010,+!p2@GRHL2!1.29!18.31!GRHL2;;chr4:188916918..188916942,+!p1@ZFP42!1.25!16.64!ZFP42;;chr5:153857819..153857824,-!p3@HAND1!1.20!14.98!HAND1;;chr8:102504690..102504704,+!p3@GRHL2!1.20!14.98!GRHL2;;chr17:46132044..46132080,+!p4@NFE2L1!1.20!14.98!NFE2L1;;chr17:7493405..7493419,-!p1@SOX15!1.20!14.98!SOX15;;chr5:2751785..2751808,-!p2@IRX2!1.16!13.31!IRX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.10!16.64!ZBTB16;;chr8:55370487..55370503,+!p1@SOX17!1.10!11.65!SOX17;;chr15:96869255..96869291,+!p6@NR2F2!1.04!18.31!NR2F2;;chr10:8095593..8095625,+!p3@GATA3!1.04!11.65!GATA3;;chr2:45236540..45236577,-!p1@SIX2!1.04!9.99!SIX2;;chr17:46671108..46671147,-!p1@HOXB5!1.04!9.99!HOXB5;;chr11:47236584..47236679,+!p1@DDB2!0.98!94.87!DDB2;;chr16:86600426..86600441,+!p1@FOXC2!0.98!21.64!FOXC2;;chr16:67881588..67881612,-!p2@CENPT!0.98!11.65!CENPT;;chr2:231084820..231084836,-!p5@SP110!0.98!9.99!SP110;;chr6:1389789..1389821,+!p1@FOXF2!0.97!11.65!FOXF2;;chr3:111314230..111314241,-!p2@ZBED2!0.97!8.32!ZBED2;;chr10:8100691..8100732,+!p5@GATA3!0.97!8.32!GATA3;;chr11:46299443..46299459,+!p4@CREB3L1!0.97!8.32!CREB3L1;;chr19:46806868..46806883,+!p3@HIF3A!0.97!8.32!HIF3A;;chr16:67881647..67881663,-!p3@CENPT!0.97!8.32!CENPT;;chr16:86612320..86612394,+!p1@FOXL1!0.97!8.32!FOXL1;;chr20:39317868..39317884,-!p1@MAFB!0.96!99.86!MAFB;;chr2:46524897..46524911,+!p2@EPAS1!0.96!23.30!EPAS1;;chr1:59249732..59249749,-!p2@JUN!0.94!96.53!JUN;;chr6:10412392..10412409,-!p4@TFAP2A!0.92!8.32!TFAP2A;;chr9:110252035..110252057,-!p1@KLF4!0.91!119.83!KLF4;;chr6:10412576..10412599,-!p5@TFAP2A!0.88!6.66!TFAP2A;;chr6:10415484..10415508,-!p3@TFAP2A!0.88!6.66!TFAP2A;;chr7:27142290..27142310,-!p1@HOXA2!0.88!6.66!HOXA2;;chr20:18038521..18038571,-!p1@OVOL2!0.88!6.66!OVOL2;;chr4:57522598..57522664,-!p3@HOPX!0.88!6.66!HOPX;;chr12:54447637..54447659,+!p4@HOXC4!0.88!6.66!HOXC4;;chr17:46675558..46675577,-!p2@HOXB6!0.88!6.66!HOXB6;;chr19:7584815..7584829,+!p2@ZNF358!0.85!8.32!ZNF358;;chr1:38512457..38512474,-!p1@POU3F1!0.85!6.66!POU3F1;;chr18:22932080..22932170,-!p1@ZNF521!0.84!26.63!ZNF521;;chr11:113930291..113930339,+!p2@ZBTB16!0.84!9.99!ZBTB16;;chr15:96869511..96869525,+!p16@NR2F2!0.84!6.66!NR2F2;;chr10:77161504..77161530,-!p1@ZNF503!0.83!83.22!ZNF503;;chr19:45261550..45261641,+!p6@BCL3!0.83!9.99!BCL3;;chr10:77161650..77161661,-!p4@ZNF503!0.83!8.32!ZNF503;;chr15:96869222..96869251,+!p18@NR2F2!0.82!6.66!NR2F2;;chr20:42295745..42295765,+!p1@MYBL2!0.81!96.53!MYBL2;;chr12:66218836..66218888,+!p1@HMGA2!0.81!54.92!HMGA2;;chr5:72744594..72744609,-!p1@FOXD1!0.81!26.63!FOXD1;;chr19:7580944..7581031,+!p1@ZNF358!0.80!174.76!ZNF358;;chr17:41622925..41622976,-!p3@ETV4!0.80!8.32!ETV4;;chr12:54447599..54447630,+!p3@HOXC4!0.80!6.66!HOXC4;;chr6:85473156..85473210,-!p2@TBX18!0.80!6.66!TBX18;;chr17:7492684..7492778,-!p2@SOX15!0.79!11.65!SOX15;;chr20:55204351..55204377,+!p1@TFAP2C!0.79!6.66!TFAP2C;;chr19:926055..926068,+!p2@ARID3A!0.78!11.65!ARID3A;;chr19:47523058..47523114,+!p1@NPAS1!0.78!4.99!NPAS1;;chr1:209979411..209979433,-!p2@IRF6!0.78!4.99!IRF6;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.78!4.99!ZNF469;;chr6:10413188..10413249,-!p7@TFAP2A!0.78!4.99!TFAP2A;;chr2:16080659..16080685,+!p1@MYCN!0.78!4.99!MYCN;;chr2:19553530..19553547,-!p3@OSR1!0.78!4.99!OSR1;;chr2:19558327..19558334,-!p2@OSR1!0.78!4.99!OSR1;;chr2:45236579..45236596,-!p2@SIX2!0.78!4.99!SIX2;;chr4:299227..299272,-!p1@ZNF732!0.78!4.99!ZNF732;;chr11:113930401..113930422,+!p3@ZBTB16!0.78!4.99!ZBTB16;;chr12:54447219..54447237,+!p6@HOXC4!0.78!4.99!HOXC4;;chr19:17356189..17356221,-!p2@NR2F6!0.77!8.32!NR2F6;;chr6:32095523..32095564,-!p2@ATF6B!0.76!6.66!ATF6B;;chr20:42295713..42295738,+!p2@MYBL2!0.75!29.96!MYBL2;;chr10:77161533..77161546,-!p2@ZNF503!0.75!19.97!ZNF503;;chr3:52001448..52001478,-!p2@PCBP4!0.74!69.90!PCBP4;;chr15:96873861..96873872,+!p9@NR2F2!0.74!9.99!NR2F2;;chr2:46524878..46524891,+!p3@EPAS1!0.74!8.32!EPAS1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.73!43.27!PPP1R13L;;chr3:52001426..52001447,-!p3@PCBP4!0.73!13.31!PCBP4;;chr15:96869292..96869320,+!p15@NR2F2!0.73!6.66!NR2F2;;chr3:24536253..24536328,-!p1@THRB!0.71!8.32!THRB;;chr11:85376097..85376108,-!p2@CREBZF!0.71!8.32!CREBZF;;chr8:145159277..145159282,+!p7@MAF1!0.71!6.66!MAF1;;chr20:306051..306096,+!p3@SOX12!0.70!11.65!SOX12;;chr20:2673383..2673441,+!p1@EBF4!0.70!6.66!EBF4;;chr6:151712764..151712785,-!p4@ZBTB2!0.70!6.66!ZBTB2;;chr6:33285505..33285529,-!p1@ZBTB22!0.69!29.96!ZBTB22;;chr17:38465413..38465438,+!p5@RARA!0.69!6.66!RARA;;chr16:29818160..29818188,+!p6@MAZ!0.68!19.97!MAZ;;chr5:174151553..174151610,+!p1@MSX2!0.68!6.66!MSX2;;chr19:47922750..47922795,-!p1@MEIS3!0.68!6.66!MEIS3;;chr1:149858461..149858479,+!p1@BOLA1!0.67!1667.68!BOLA1;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.67!6.66!MEIS3P1;;chr6:21594391..21594431,+!p9@SOX4!0.67!4.99!SOX4;;chr16:3185125..3185173,+!p1@ZNF213!0.66!9.99!ZNF213;;chr9:110251836..110251887,-!p4@KLF4!0.66!4.99!KLF4;;chr4:81118647..81118666,+!p1@PRDM8!0.66!4.99!PRDM8;;chr17:3571863..3571881,-!p1@TAX1BP3!0.65!292.93!TAX1BP3;;chr1:59249707..59249727,-!p1@JUN!0.65!171.43!JUN;;chr6:34204921..34204939,+!p3@HMGA1!0.65!121.50!HMGA1;;chr5:176738887..176738934,-!p1@MXD3!0.65!26.63!MXD3;;chr19:36545128..36545203,-!p1@THAP8!0.65!18.31!THAP8;;chr10:77161133..77161176,-!p3@ZNF503!0.65!8.32!ZNF503;;chr4:2263809..2263854,-!p1@MXD4!0.64!153.12!MXD4;;chr19:59031131..59031193,-!p1@ZBTB45!0.64!51.59!ZBTB45;;chr12:53625966..53626012,-!p2@RARG!0.64!9.99!RARG;;chr5:178368186..178368238,+!p1@ZNF454!0.64!6.66!ZNF454;;chr6:10415263..10415274,-!p8@TFAP2A!0.64!3.33!TFAP2A;;chr6:29648890..29648944,-!p1@ZFP57!0.64!3.33!ZFP57;;chr6:391743..391759,+!p1@IRF4!0.64!3.33!IRF4;;chr7:101917447..101917479,+!p4@CUX1!0.64!3.33!CUX1;;chr7:1577899..1577943,+!p3@MAFK!0.64!3.33!MAFK;;chr10:8097295..8097320,+!p6@GATA3!0.64!3.33!GATA3;;chr11:125034586..125034604,+!p3@PKNOX2!0.64!3.33!PKNOX2;;chr11:46333883..46333900,+!p8@CREB3L1!0.64!3.33!CREB3L1;;chr12:3068634..3068656,+!p5@TEAD4!0.64!3.33!TEAD4;;chr14:37131058..37131139,+!p1@PAX9!0.64!3.33!PAX9;;chr19:7584204..7584218,+!p9@ZNF358!0.64!3.33!ZNF358;;chr1:201979743..201979762,+!p1@ELF3!0.64!3.33!ELF3;;chr20:18038486..18038520,-!p2@OVOL2!0.64!3.33!OVOL2;;chr16:67881534..67881549,-!p4@CENPT!0.64!3.33!CENPT;;chr16:86600870..86600921,+!p2@FOXC2!0.64!3.33!FOXC2;;chr22:24093154..24093183,-!p2@ZNF70!0.64!3.33!ZNF70;;chr2:66666432..66666462,+!p7@MEIS1!0.64!3.33!MEIS1;;chr3:138665937..138665968,-!p1@FOXL2!0.64!3.33!FOXL2;;chr3:138665969..138665993,-!p2@FOXL2!0.64!3.33!FOXL2;;chr3:24536332..24536358,-!p2@THRB!0.64!3.33!THRB;;chr3:71631217..71631234,-!p33@FOXP1!0.64!3.33!FOXP1;;chr4:149363494..149363543,-!p1@NR3C2!0.64!3.33!NR3C2;;chr4:149365827..149365870,-!p5@NR3C2!0.64!3.33!NR3C2;;chrX:56258900..56258917,+!p4@KLF8!0.64!3.33!KLF8;;chr9:132427883..132427951,+!p2@PRRX2!0.64!3.33!PRRX2;;chr16:67867749..67867852,-!p1@CENPT!0.63!88.21!CENPT;;chr14:62162285..62162296,+!p3@HIF1A!0.63!19.97!HIF1A;;chr12:66218255..66218304,+!p3@HMGA2!0.63!9.99!HMGA2;;chr3:12329397..12329433,+!p2@PPARG!0.63!8.32!PPARG;;chr2:46524506..46524514,+!p5@EPAS1!0.63!6.66!EPAS1;;chr2:174830540..174830563,-!p8@SP3!0.63!4.99!SP3;;chr13:73633131..73633149,+!p1@KLF5!0.62!39.94!KLF5;;chr9:117150254..117150271,-!p1@AKNA!0.62!9.99!AKNA;;chr12:66218212..66218244,+!p5@HMGA2!0.62!4.99!HMGA2;;chr12:80085255..80085284,-!p9@PAWR!0.62!4.99!PAWR;;chr12:66218598..66218645,+!p2@HMGA2!0.61!16.64!HMGA2;;chr7:6655225..6655279,+!p1@ENST00000457543!0.61!4.99!ZNF853;;chrX:106960285..106960299,-!p1@TSC22D3!0.60!96.53!TSC22D3;;chr16:29817841..29817865,+!p1@MAZ!0.60!78.22!MAZ;;chr1:249132410..249132456,+!p1@ZNF672!0.60!26.63!ZNF672;;chr2:28616358..28616380,+!p3@FOSL2!0.60!18.31!FOSL2;;chr20:45142154..45142227,-!p1@ZNF334!0.60!6.66!ZNF334;;chr17:41622765..41622821,-!p2@ETV4!0.60!4.99!ETV4;;chr12:3068196..3068232,+!p9@TEAD4!0.60!3.33!TEAD4;;chr16:29817789..29817838,+!p2@MAZ!0.59!48.27!MAZ;;chr11:46722560..46722595,+!p1@ZNF408!0.59!18.31!ZNF408;;chr1:8939265..8939367,-!p5@ENO1!0.59!6.66!ENO1;;chr19:56671612..56671626,+!p4@ZNF444!0.59!4.99!ZNF444;;chr6:144329531..144329546,-!p5@PLAGL1!0.59!4.99!PLAGL1;;chr22:21356378..21356422,-!p2@THAP7!0.58!29.96!THAP7;;chr10:51572408..51572454,+!p3@NCOA4!0.58!19.97!NCOA4;;chr19:926001..926046,+!p1@ARID3A!0.58!11.65!ARID3A;;chr1:249132484..249132505,+!p4@ZNF672!0.58!9.99!ZNF672;;chr16:31085058..31085078,-!p2@ZNF668!0.58!6.66!ZNF668;;chr16:3185051..3185068,+!p3@ZNF213!0.58!4.99!ZNF213;;chr19:44124019..44124030,-!p2@ZNF428!0.58!3.33!ZNF428;;chr3:12330560..12330579,+!p1@PPARG!0.58!3.33!PPARG;;chr3:71631382..71631413,-!p20@FOXP1!0.58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|fonse_cell_line=
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 66: Line 42:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Placental%2520Epithelial%2520Cells%252c%2520donor2.CNhs11386.11355-117H5.hg38.nobarcode.ctss.bed.gz
|id=FF:11355-117H5
|is_a=EFO:0002091;;FF:0000136
|is_obsolete=
|library_id=CNhs11386
|library_id_phase_based=2:CNhs11386
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11355
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.CGTACG.11355
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11355
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10006.CGTACG.11355
|name=Placental Epithelial Cells, donor2
|namespace=FANTOM5
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|rna_box=117
|rna_catalog_number=CA230-R10f
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=2544
|rna_od260/230=
|rna_od260/280=
|rna_position=H5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117H5
|rna_weight_ug=10
|rnaseq_library_id=SRhi10006.CGTACG
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=placental epithelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.69254218638554e-223!GO:0005737;cytoplasm;1.46327378915446e-187!GO:0043226;organelle;1.11983417833617e-142!GO:0043229;intracellular organelle;3.07802902039044e-142!GO:0044444;cytoplasmic part;1.04384697171368e-137!GO:0044422;organelle part;2.90634314875486e-137!GO:0044446;intracellular organelle part;7.37491685196444e-136!GO:0043231;intracellular membrane-bound organelle;4.13550852232955e-135!GO:0043227;membrane-bound organelle;7.68638905873572e-135!GO:0032991;macromolecular complex;1.21464265196879e-84!GO:0030529;ribonucleoprotein complex;5.31745343264313e-71!GO:0005515;protein binding;1.35332135652791e-67!GO:0005739;mitochondrion;2.64400177253474e-65!GO:0044237;cellular metabolic process;2.00690310806791e-59!GO:0044238;primary metabolic process;8.32675152925763e-59!GO:0043233;organelle lumen;3.09990810901789e-57!GO:0031974;membrane-enclosed lumen;3.09990810901789e-57!GO:0031090;organelle membrane;3.4152291744159e-52!GO:0044428;nuclear part;2.72111766522928e-51!GO:0043170;macromolecule metabolic process;1.45110660242775e-48!GO:0003723;RNA binding;5.51251669785253e-47!GO:0005840;ribosome;2.26902813959955e-46!GO:0009058;biosynthetic process;1.31281816928159e-45!GO:0019538;protein metabolic process;4.96732753340353e-45!GO:0043234;protein complex;1.3156283622736e-43!GO:0044429;mitochondrial part;1.5221284123513e-43!GO:0006412;translation;8.38115630298719e-43!GO:0003735;structural constituent of ribosome;1.50175930183171e-41!GO:0016043;cellular component organization and biogenesis;5.67605742474353e-41!GO:0044260;cellular macromolecule metabolic process;1.97151446730352e-39!GO:0044249;cellular biosynthetic process;8.87894520566768e-39!GO:0044267;cellular protein metabolic process;1.14067902079601e-38!GO:0009059;macromolecule biosynthetic process;3.41677659724971e-37!GO:0006396;RNA processing;2.01108753995623e-36!GO:0031967;organelle envelope;2.65257538246504e-36!GO:0031975;envelope;5.64415177724687e-36!GO:0033279;ribosomal subunit;1.3452772290886e-35!GO:0005829;cytosol;2.5479986404977e-35!GO:0043228;non-membrane-bound organelle;4.30030317225446e-35!GO:0043232;intracellular non-membrane-bound organelle;4.30030317225446e-35!GO:0005634;nucleus;1.34700992521378e-34!GO:0033036;macromolecule localization;5.15269447603089e-33!GO:0015031;protein transport;1.24391014726437e-32!GO:0008104;protein localization;3.33665994308564e-31!GO:0045184;establishment of protein localization;4.28456831225298e-31!GO:0031981;nuclear lumen;1.20205007742699e-30!GO:0065003;macromolecular complex assembly;1.78537996158239e-29!GO:0006996;organelle organization and biogenesis;1.95908281284916e-29!GO:0005740;mitochondrial envelope;2.06116314119329e-29!GO:0031966;mitochondrial membrane;1.39534584475789e-27!GO:0019866;organelle inner membrane;3.55040630272355e-27!GO:0016071;mRNA metabolic process;3.84706639140452e-27!GO:0046907;intracellular transport;4.51718557867604e-27!GO:0022607;cellular component assembly;3.24774855448608e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.64497187624551e-26!GO:0005743;mitochondrial inner membrane;1.03568416254788e-25!GO:0008380;RNA splicing;3.05988533012154e-25!GO:0006397;mRNA processing;5.90297582041749e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.0797822099283e-23!GO:0006259;DNA metabolic process;9.41154269567338e-23!GO:0005783;endoplasmic reticulum;3.15124300943544e-22!GO:0006886;intracellular protein transport;8.77034104470663e-22!GO:0044445;cytosolic part;5.17222486644642e-21!GO:0044455;mitochondrial membrane part;5.67275288711917e-21!GO:0012505;endomembrane system;5.77800587796565e-21!GO:0043283;biopolymer metabolic process;6.82268014135045e-21!GO:0006119;oxidative phosphorylation;1.37756478610761e-20!GO:0007049;cell cycle;8.8881037845368e-20!GO:0005681;spliceosome;5.83633965694246e-19!GO:0015934;large ribosomal subunit;6.24588473643639e-19!GO:0044432;endoplasmic reticulum part;8.96028834379495e-19!GO:0051649;establishment of cellular localization;3.69745492427874e-18!GO:0048770;pigment granule;6.94320886513269e-18!GO:0042470;melanosome;6.94320886513269e-18!GO:0051641;cellular localization;7.35141557252882e-18!GO:0016462;pyrophosphatase activity;9.72249465745576e-18!GO:0015935;small ribosomal subunit;1.02326743428846e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.06266244568508e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.09348832553954e-17!GO:0031980;mitochondrial lumen;1.8371715945827e-17!GO:0005759;mitochondrial matrix;1.8371715945827e-17!GO:0006457;protein folding;3.98439838327439e-17!GO:0005654;nucleoplasm;7.06698239761302e-17!GO:0022402;cell cycle process;1.20301513969571e-16!GO:0016874;ligase activity;2.17959500995973e-16!GO:0017111;nucleoside-triphosphatase activity;2.98954933482783e-16!GO:0005746;mitochondrial respiratory chain;3.75736001156198e-16!GO:0000278;mitotic cell cycle;6.89857490955938e-16!GO:0051186;cofactor metabolic process;1.14568080164796e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.09926160104802e-15!GO:0005730;nucleolus;9.88659784918297e-15!GO:0005794;Golgi apparatus;1.72824699203997e-14!GO:0010467;gene expression;1.87120180649222e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.47021354365027e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.81084064425916e-14!GO:0044451;nucleoplasm part;6.27895228128771e-14!GO:0022618;protein-RNA complex assembly;7.67055396264017e-14!GO:0050136;NADH dehydrogenase (quinone) activity;7.67055396264017e-14!GO:0003954;NADH dehydrogenase activity;7.67055396264017e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.67055396264017e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.77238761185521e-14!GO:0005761;mitochondrial ribosome;1.35020835216904e-13!GO:0000313;organellar ribosome;1.35020835216904e-13!GO:0000166;nucleotide binding;1.40942987689504e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.67384261185075e-13!GO:0005789;endoplasmic reticulum membrane;3.25323497288197e-13!GO:0006512;ubiquitin cycle;4.05277319302179e-13!GO:0043285;biopolymer catabolic process;6.91243335305674e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.58323114708414e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.13808751942061e-12!GO:0006974;response to DNA damage stimulus;1.52538397884787e-12!GO:0006732;coenzyme metabolic process;2.58217909030116e-12!GO:0030964;NADH dehydrogenase complex (quinone);5.01984731713491e-12!GO:0045271;respiratory chain complex I;5.01984731713491e-12!GO:0005747;mitochondrial respiratory chain complex I;5.01984731713491e-12!GO:0006605;protein targeting;7.00761804450842e-12!GO:0009057;macromolecule catabolic process;1.35814586237327e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.35814586237327e-11!GO:0042773;ATP synthesis coupled electron transport;1.35814586237327e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.66054547635246e-11!GO:0000074;regulation of progression through cell cycle;2.18153399073409e-11!GO:0051726;regulation of cell cycle;2.33214851368264e-11!GO:0008134;transcription factor binding;2.84932815936024e-11!GO:0007067;mitosis;3.74101085117613e-11!GO:0043412;biopolymer modification;3.81909091619919e-11!GO:0022403;cell cycle phase;3.9478396295546e-11!GO:0005694;chromosome;4.08470229061202e-11!GO:0044265;cellular macromolecule catabolic process;4.11532141704606e-11!GO:0000087;M phase of mitotic cell cycle;4.4652424677662e-11!GO:0044248;cellular catabolic process;5.48875942095055e-11!GO:0030163;protein catabolic process;5.53601637252705e-11!GO:0008135;translation factor activity, nucleic acid binding;6.63617150416677e-11!GO:0051082;unfolded protein binding;8.0210241308607e-11!GO:0009055;electron carrier activity;9.82318132137517e-11!GO:0048193;Golgi vesicle transport;1.21570894663449e-10!GO:0009259;ribonucleotide metabolic process;1.25129028342099e-10!GO:0044427;chromosomal part;1.31221238685023e-10!GO:0016192;vesicle-mediated transport;1.36523662122211e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.70605388185757e-10!GO:0042254;ribosome biogenesis and assembly;1.98656848723912e-10!GO:0006511;ubiquitin-dependent protein catabolic process;2.25923638451755e-10!GO:0019941;modification-dependent protein catabolic process;2.63807438484039e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.63807438484039e-10!GO:0009150;purine ribonucleotide metabolic process;2.79230981783455e-10!GO:0044257;cellular protein catabolic process;2.93246057470972e-10!GO:0032553;ribonucleotide binding;3.64579430709268e-10!GO:0032555;purine ribonucleotide binding;3.64579430709268e-10!GO:0009719;response to endogenous stimulus;4.09333869133504e-10!GO:0006464;protein modification process;4.675704905614e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;4.675704905614e-10!GO:0000375;RNA splicing, via transesterification reactions;4.675704905614e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.675704905614e-10!GO:0006163;purine nucleotide metabolic process;5.10389333341555e-10!GO:0051276;chromosome organization and biogenesis;5.49227570342069e-10!GO:0042623;ATPase activity, coupled;5.9266322331064e-10!GO:0017076;purine nucleotide binding;7.23819918578278e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.45433999866573e-10!GO:0009260;ribonucleotide biosynthetic process;7.65200901257225e-10!GO:0016887;ATPase activity;7.65200901257225e-10!GO:0006281;DNA repair;8.11267827882708e-10!GO:0009199;ribonucleoside triphosphate metabolic process;1.05251603226066e-09!GO:0006333;chromatin assembly or disassembly;1.16939497855396e-09!GO:0065004;protein-DNA complex assembly;1.42641208771978e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.42641208771978e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.42641208771978e-09!GO:0006164;purine nucleotide biosynthetic process;1.52337185737033e-09!GO:0006446;regulation of translational initiation;1.70974680237591e-09!GO:0009141;nucleoside triphosphate metabolic process;1.73106562327112e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.91011316953275e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.95340053174896e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.95340053174896e-09!GO:0006399;tRNA metabolic process;2.36023320822895e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.72120686795299e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.72120686795299e-09!GO:0016491;oxidoreductase activity;3.56310631817489e-09!GO:0005524;ATP binding;3.60825553024234e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.9416166886629e-09!GO:0005793;ER-Golgi intermediate compartment;4.42174391449844e-09!GO:0006413;translational initiation;5.57224881388742e-09!GO:0006323;DNA packaging;5.91889815999528e-09!GO:0000785;chromatin;6.04692383973521e-09!GO:0032559;adenyl ribonucleotide binding;6.14719061795266e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.88483555657414e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.88212348823195e-09!GO:0006334;nucleosome assembly;9.65151443493237e-09!GO:0012501;programmed cell death;1.1879242254068e-08!GO:0006915;apoptosis;1.23758455335403e-08!GO:0006461;protein complex assembly;1.52091899312741e-08!GO:0030554;adenyl nucleotide binding;1.72249359921451e-08!GO:0031497;chromatin assembly;2.43612357613106e-08!GO:0051301;cell division;2.51634928831071e-08!GO:0005635;nuclear envelope;2.8741020304753e-08!GO:0015986;ATP synthesis coupled proton transport;2.8741020304753e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.8741020304753e-08!GO:0003743;translation initiation factor activity;2.89460187587043e-08!GO:0008639;small protein conjugating enzyme activity;3.04720729705023e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.63099296093871e-08!GO:0006260;DNA replication;4.74783695120732e-08!GO:0051188;cofactor biosynthetic process;4.86371732342274e-08!GO:0005788;endoplasmic reticulum lumen;6.00568573923528e-08!GO:0019787;small conjugating protein ligase activity;6.19323477007056e-08!GO:0004842;ubiquitin-protein ligase activity;6.92470893642252e-08!GO:0008565;protein transporter activity;8.18608065659041e-08!GO:0008219;cell death;1.00476085001675e-07!GO:0016265;death;1.00476085001675e-07!GO:0009117;nucleotide metabolic process;1.10321771065125e-07!GO:0000279;M phase;1.13636813532066e-07!GO:0031965;nuclear membrane;1.31237200909441e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.46838279261076e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.46838279261076e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.46838279261076e-07!GO:0019829;cation-transporting ATPase activity;1.52170876613173e-07!GO:0005773;vacuole;1.66073853837968e-07!GO:0046034;ATP metabolic process;1.66985284507521e-07!GO:0016604;nuclear body;2.24700404802827e-07!GO:0006754;ATP biosynthetic process;2.26929461115079e-07!GO:0006753;nucleoside phosphate metabolic process;2.26929461115079e-07!GO:0043687;post-translational protein modification;2.47680277017216e-07!GO:0003712;transcription cofactor activity;2.6613437649512e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.6801662359618e-07!GO:0009056;catabolic process;2.85694238544258e-07!GO:0048475;coated membrane;3.04659642072822e-07!GO:0030117;membrane coat;3.04659642072822e-07!GO:0043038;amino acid activation;3.13468613248493e-07!GO:0006418;tRNA aminoacylation for protein translation;3.13468613248493e-07!GO:0043039;tRNA aminoacylation;3.13468613248493e-07!GO:0006364;rRNA processing;3.54104091123673e-07!GO:0031988;membrane-bound vesicle;3.59730024206351e-07!GO:0005768;endosome;4.06384312204384e-07!GO:0007005;mitochondrion organization and biogenesis;4.18565616752509e-07!GO:0016072;rRNA metabolic process;4.30106965539503e-07!GO:0044453;nuclear membrane part;4.96096325757077e-07!GO:0030532;small nuclear ribonucleoprotein complex;6.18080900129634e-07!GO:0009060;aerobic respiration;7.30643922778855e-07!GO:0016881;acid-amino acid ligase activity;7.96333725021283e-07!GO:0030120;vesicle coat;8.34083298212325e-07!GO:0030662;coated vesicle membrane;8.34083298212325e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.05707497770401e-06!GO:0044431;Golgi apparatus part;1.08622816252269e-06!GO:0031982;vesicle;1.10909580427821e-06!GO:0008654;phospholipid biosynthetic process;1.22834308681773e-06!GO:0006091;generation of precursor metabolites and energy;1.24379836097986e-06!GO:0016740;transferase activity;1.36792564742425e-06!GO:0031410;cytoplasmic vesicle;1.44571956433902e-06!GO:0006913;nucleocytoplasmic transport;1.55796913329519e-06!GO:0015630;microtubule cytoskeleton;1.78235778100201e-06!GO:0017038;protein import;2.03730583635197e-06!GO:0051329;interphase of mitotic cell cycle;2.60318244067612e-06!GO:0051169;nuclear transport;2.63148669412629e-06!GO:0016607;nuclear speck;2.64976418798934e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.98444300861142e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.44223256302751e-06!GO:0045333;cellular respiration;3.60577405040659e-06!GO:0009108;coenzyme biosynthetic process;4.19945358033186e-06!GO:0045259;proton-transporting ATP synthase complex;4.19945358033186e-06!GO:0006752;group transfer coenzyme metabolic process;4.27377218314204e-06!GO:0051325;interphase;4.47939855840975e-06!GO:0000323;lytic vacuole;5.26513386687478e-06!GO:0005764;lysosome;5.26513386687478e-06!GO:0051246;regulation of protein metabolic process;7.30331871776663e-06!GO:0032446;protein modification by small protein conjugation;9.39619094391175e-06!GO:0045786;negative regulation of progression through cell cycle;1.07619250196065e-05!GO:0065002;intracellular protein transport across a membrane;1.23317827225933e-05!GO:0005762;mitochondrial large ribosomal subunit;1.30816339453173e-05!GO:0000315;organellar large ribosomal subunit;1.30816339453173e-05!GO:0046474;glycerophospholipid biosynthetic process;1.36730422965286e-05!GO:0031252;leading edge;1.4472756699355e-05!GO:0016787;hydrolase activity;1.45211419659049e-05!GO:0048523;negative regulation of cellular process;1.52086709013712e-05!GO:0016567;protein ubiquitination;1.52683898250642e-05!GO:0000786;nucleosome;1.95869681550877e-05!GO:0044440;endosomal part;1.95869681550877e-05!GO:0010008;endosome membrane;1.95869681550877e-05!GO:0006099;tricarboxylic acid cycle;2.00678555910219e-05!GO:0046356;acetyl-CoA catabolic process;2.00678555910219e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.18758279337202e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.26057811840261e-05!GO:0003924;GTPase activity;2.38074567563071e-05!GO:0051187;cofactor catabolic process;2.39242155452189e-05!GO:0006084;acetyl-CoA metabolic process;2.8699824458692e-05!GO:0005839;proteasome core complex (sensu Eukaryota);3.07819747967878e-05!GO:0009109;coenzyme catabolic process;3.31326726864691e-05!GO:0000139;Golgi membrane;3.65362136026612e-05!GO:0065009;regulation of a molecular function;3.72546256153561e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.8729649388555e-05!GO:0005643;nuclear pore;4.09054118083985e-05!GO:0008026;ATP-dependent helicase activity;4.20223515607307e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.4203993547232e-05!GO:0006082;organic acid metabolic process;4.47155393578799e-05!GO:0016853;isomerase activity;4.7379574149021e-05!GO:0003697;single-stranded DNA binding;5.13357436771954e-05!GO:0006916;anti-apoptosis;5.36853415045645e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;5.47242242822813e-05!GO:0005770;late endosome;5.59854662202027e-05!GO:0019752;carboxylic acid metabolic process;5.60375522021124e-05!GO:0043566;structure-specific DNA binding;6.65765029435484e-05!GO:0042981;regulation of apoptosis;8.00994039623155e-05!GO:0004386;helicase activity;9.05397571493921e-05!GO:0043067;regulation of programmed cell death;0.000100516774680195!GO:0008610;lipid biosynthetic process;0.000102672883645571!GO:0045454;cell redox homeostasis;0.000108173497711889!GO:0030867;rough endoplasmic reticulum membrane;0.000109488261255781!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000110734697165063!GO:0016126;sterol biosynthetic process;0.000114610881441953!GO:0009165;nucleotide biosynthetic process;0.000116405937357127!GO:0046930;pore complex;0.000119933946463027!GO:0043623;cellular protein complex assembly;0.000122086571741484!GO:0000151;ubiquitin ligase complex;0.000123369501165726!GO:0005905;coated pit;0.000132558614247805!GO:0016779;nucleotidyltransferase activity;0.000133320712780286!GO:0048519;negative regulation of biological process;0.000140152659170621!GO:0051789;response to protein stimulus;0.000140152659170621!GO:0006986;response to unfolded protein;0.000140152659170621!GO:0004298;threonine endopeptidase activity;0.000146644145993283!GO:0016859;cis-trans isomerase activity;0.000156520486438503!GO:0043069;negative regulation of programmed cell death;0.000158234783849106!GO:0046489;phosphoinositide biosynthetic process;0.000185420253160293!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000187724930393906!GO:0043066;negative regulation of apoptosis;0.000195377867154238!GO:0005819;spindle;0.000195757834567864!GO:0033116;ER-Golgi intermediate compartment membrane;0.000212860259168936!GO:0005798;Golgi-associated vesicle;0.000215395380229695!GO:0006613;cotranslational protein targeting to membrane;0.000223902049621025!GO:0019899;enzyme binding;0.000224150071010164!GO:0003713;transcription coactivator activity;0.000229359075691911!GO:0006366;transcription from RNA polymerase II promoter;0.000246943435229686!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000248187833424625!GO:0015399;primary active transmembrane transporter activity;0.000248187833424625!GO:0042802;identical protein binding;0.000282706363394005!GO:0015980;energy derivation by oxidation of organic compounds;0.000288254717118491!GO:0006979;response to oxidative stress;0.000314472898335584!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000323988655427555!GO:0003676;nucleic acid binding;0.000324888827529203!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000334379780369169!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.000344405848504408!GO:0007010;cytoskeleton organization and biogenesis;0.000345489006015896!GO:0016563;transcription activator activity;0.000345894261825745!GO:0031968;organelle outer membrane;0.000364575699964427!GO:0019867;outer membrane;0.000368511056219048!GO:0003724;RNA helicase activity;0.000400789862180637!GO:0000245;spliceosome assembly;0.000414116752641072!GO:0016049;cell growth;0.00041487931411627!GO:0005791;rough endoplasmic reticulum;0.000482386114513993!GO:0008361;regulation of cell size;0.000497062153909221!GO:0001558;regulation of cell growth;0.000500815996610902!GO:0000314;organellar small ribosomal subunit;0.000500815996610902!GO:0005763;mitochondrial small ribosomal subunit;0.000500815996610902!GO:0006650;glycerophospholipid metabolic process;0.000504212331615515!GO:0043021;ribonucleoprotein binding;0.000518342431250625!GO:0016568;chromatin modification;0.00052346660542164!GO:0006818;hydrogen transport;0.000537416895787225!GO:0008250;oligosaccharyl transferase complex;0.000550474251117382!GO:0005813;centrosome;0.000628866178619001!GO:0019843;rRNA binding;0.000633854321294842!GO:0006793;phosphorus metabolic process;0.000651738940405855!GO:0006796;phosphate metabolic process;0.000651738940405855!GO:0015992;proton transport;0.000693951415241435!GO:0046467;membrane lipid biosynthetic process;0.000730010066662883!GO:0003899;DNA-directed RNA polymerase activity;0.000806975472323509!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000876078732408751!GO:0005048;signal sequence binding;0.000900791437987241!GO:0051920;peroxiredoxin activity;0.000903886619391894!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000921402974310669!GO:0030659;cytoplasmic vesicle membrane;0.00092753141455309!GO:0005667;transcription factor complex;0.00093026763949719!GO:0030118;clathrin coat;0.000936146857537945!GO:0004576;oligosaccharyl transferase activity;0.000960025514542691!GO:0051170;nuclear import;0.000977368969640878!GO:0003714;transcription corepressor activity;0.00101082098431324!GO:0043492;ATPase activity, coupled to movement of substances;0.00101793788564617!GO:0030176;integral to endoplasmic reticulum membrane;0.00102556400984051!GO:0008092;cytoskeletal protein binding;0.00108621950334436!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115569641847549!GO:0005741;mitochondrial outer membrane;0.00115687389521355!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00117636326640318!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00117774845268362!GO:0030133;transport vesicle;0.00131685706830016!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00133376079967966!GO:0030132;clathrin coat of coated pit;0.00136472912589185!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00137404306316993!GO:0006695;cholesterol biosynthetic process;0.00138409249640663!GO:0031324;negative regulation of cellular metabolic process;0.00141013044249339!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00142795161890689!GO:0003684;damaged DNA binding;0.00144773307655347!GO:0006606;protein import into nucleus;0.0014764982018424!GO:0051427;hormone receptor binding;0.00150591194950081!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00150591194950081!GO:0005525;GTP binding;0.0015071971358004!GO:0043284;biopolymer biosynthetic process;0.00152492217422543!GO:0016310;phosphorylation;0.00153620726828708!GO:0050790;regulation of catalytic activity;0.00154960383484448!GO:0006506;GPI anchor biosynthetic process;0.00155223842986563!GO:0043681;protein import into mitochondrion;0.00155604439095639!GO:0007051;spindle organization and biogenesis;0.00163902269088209!GO:0051252;regulation of RNA metabolic process;0.00164206536903341!GO:0050657;nucleic acid transport;0.00166334069436269!GO:0051236;establishment of RNA localization;0.00166334069436269!GO:0050658;RNA transport;0.00166334069436269!GO:0006261;DNA-dependent DNA replication;0.00172558912615843!GO:0044262;cellular carbohydrate metabolic process;0.00174639966804043!GO:0005815;microtubule organizing center;0.00175885532802054!GO:0005774;vacuolar membrane;0.00176877620010612!GO:0008033;tRNA processing;0.00184068176846309!GO:0007006;mitochondrial membrane organization and biogenesis;0.00184641761597745!GO:0006612;protein targeting to membrane;0.00188468060835864!GO:0006414;translational elongation;0.00194221838515517!GO:0000075;cell cycle checkpoint;0.00194221838515517!GO:0007040;lysosome organization and biogenesis;0.00194343878498344!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00195111219841245!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00195111219841245!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00195111219841245!GO:0007088;regulation of mitosis;0.00198718216196781!GO:0009892;negative regulation of metabolic process;0.00205355488793111!GO:0006403;RNA localization;0.00207277239082904!GO:0005885;Arp2/3 protein complex;0.00209739966624494!GO:0008186;RNA-dependent ATPase activity;0.00213117147111846!GO:0030119;AP-type membrane coat adaptor complex;0.00216259695599304!GO:0018196;peptidyl-asparagine modification;0.00234803922483142!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00234803922483142!GO:0007050;cell cycle arrest;0.00247011037368351!GO:0005769;early endosome;0.00262063702623256!GO:0035257;nuclear hormone receptor binding;0.00274079630784719!GO:0006520;amino acid metabolic process;0.00287469965236407!GO:0030384;phosphoinositide metabolic process;0.00296593169529413!GO:0043488;regulation of mRNA stability;0.00300845728674401!GO:0043487;regulation of RNA stability;0.00300845728674401!GO:0006497;protein amino acid lipidation;0.00300845728674401!GO:0030663;COPI coated vesicle membrane;0.00305867366790987!GO:0030126;COPI vesicle coat;0.00305867366790987!GO:0005874;microtubule;0.00312383855506468!GO:0030036;actin cytoskeleton organization and biogenesis;0.00317455819490658!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00318596895586616!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00322573502840331!GO:0030131;clathrin adaptor complex;0.00325730072920617!GO:0042158;lipoprotein biosynthetic process;0.00352439716949468!GO:0006839;mitochondrial transport;0.00352621970601868!GO:0046870;cadmium ion binding;0.00355153743035073!GO:0016044;membrane organization and biogenesis;0.00358240259226258!GO:0044433;cytoplasmic vesicle part;0.00359655666896733!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00363088543891863!GO:0046483;heterocycle metabolic process;0.00376754654930862!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00381449704425034!GO:0044437;vacuolar part;0.00397627189165014!GO:0016564;transcription repressor activity;0.00402502878151492!GO:0048487;beta-tubulin binding;0.00408772763762017!GO:0006289;nucleotide-excision repair;0.00420975959584288!GO:0000049;tRNA binding;0.00432610829713969!GO:0048471;perinuclear region of cytoplasm;0.00441113154849759!GO:0048037;cofactor binding;0.00445702837592927!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00469048351010863!GO:0030027;lamellipodium;0.00481455201205766!GO:0007033;vacuole organization and biogenesis;0.00481455201205766!GO:0004004;ATP-dependent RNA helicase activity;0.00485332780968375!GO:0045936;negative regulation of phosphate metabolic process;0.00485753934023481!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00487477869921221!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00487477869921221!GO:0006505;GPI anchor metabolic process;0.00489797335359249!GO:0051101;regulation of DNA binding;0.00499593295742854!GO:0030137;COPI-coated vesicle;0.00530286075434193!GO:0001726;ruffle;0.00582490834624991!GO:0016125;sterol metabolic process;0.00623319107549871!GO:0003682;chromatin binding;0.00643013535357547!GO:0040008;regulation of growth;0.00646663135549616!GO:0022890;inorganic cation transmembrane transporter activity;0.00646663135549616!GO:0015631;tubulin binding;0.00683477233168802!GO:0050662;coenzyme binding;0.00685934936463191!GO:0048522;positive regulation of cellular process;0.00685934936463191!GO:0008094;DNA-dependent ATPase activity;0.00693360956039443!GO:0051098;regulation of binding;0.0069486655121172!GO:0017166;vinculin binding;0.00701414733699254!GO:0016408;C-acyltransferase activity;0.0071973757182861!GO:0006807;nitrogen compound metabolic process;0.00749835736803721!GO:0005869;dynactin complex;0.00751950608122005!GO:0016070;RNA metabolic process;0.0076340456251534!GO:0030029;actin filament-based process;0.0076340456251534!GO:0000775;chromosome, pericentric region;0.00781118831575083!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00782865813698997!GO:0031902;late endosome membrane;0.00790334496998321!GO:0006118;electron transport;0.0086353429867533!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00877099720842299!GO:0015002;heme-copper terminal oxidase activity;0.00877099720842299!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00877099720842299!GO:0004129;cytochrome-c oxidase activity;0.00877099720842299!GO:0032561;guanyl ribonucleotide binding;0.00892625795444835!GO:0019001;guanyl nucleotide binding;0.00892625795444835!GO:0012506;vesicle membrane;0.00916686394152279!GO:0030658;transport vesicle membrane;0.00928960045820616!GO:0007243;protein kinase cascade;0.00957285554863362!GO:0004177;aminopeptidase activity;0.00979682419556999!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00986608397191542!GO:0000082;G1/S transition of mitotic cell cycle;0.00986608397191542!GO:0006626;protein targeting to mitochondrion;0.0100544346345274!GO:0051128;regulation of cellular component organization and biogenesis;0.0108477011188364!GO:0030145;manganese ion binding;0.0111544110875815!GO:0005684;U2-dependent spliceosome;0.0111847410025626!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0112114267477075!GO:0006383;transcription from RNA polymerase III promoter;0.0114654101405022!GO:0051287;NAD binding;0.0115073766677392!GO:0005856;cytoskeleton;0.0122967812078369!GO:0008637;apoptotic mitochondrial changes;0.0125857087727526!GO:0008632;apoptotic program;0.0126130540858546!GO:0006778;porphyrin metabolic process;0.0126130540858546!GO:0033013;tetrapyrrole metabolic process;0.0126130540858546!GO:0006509;membrane protein ectodomain proteolysis;0.0127201082561496!GO:0033619;membrane protein proteolysis;0.0127201082561496!GO:0042326;negative regulation of phosphorylation;0.0127395847106118!GO:0008022;protein C-terminus binding;0.0129395577679356!GO:0006595;polyamine metabolic process;0.0132692383488574!GO:0003746;translation elongation factor activity;0.0137904801677063!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0143295499073781!GO:0044452;nucleolar part;0.0147220325159192!GO:0003690;double-stranded DNA binding;0.0151375493678081!GO:0005765;lysosomal membrane;0.0155447690168262!GO:0051168;nuclear export;0.015621362522277!GO:0051028;mRNA transport;0.0157798633144448!GO:0006644;phospholipid metabolic process;0.0157812793296654!GO:0016363;nuclear matrix;0.0158751560084072!GO:0030125;clathrin vesicle coat;0.0159615932942596!GO:0030665;clathrin coated vesicle membrane;0.0159615932942596!GO:0006284;base-excision repair;0.0162118878707144!GO:0031072;heat shock protein binding;0.0167679802885621!GO:0009308;amine metabolic process;0.0169494828828916!GO:0008180;signalosome;0.0173547425149911!GO:0006643;membrane lipid metabolic process;0.0173895040990394!GO:0030880;RNA polymerase complex;0.0176166468365856!GO:0043154;negative regulation of caspase activity;0.0182876418115089!GO:0046426;negative regulation of JAK-STAT cascade;0.0182876418115089!GO:0048500;signal recognition particle;0.0183876002499268!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0188742502636954!GO:0000030;mannosyltransferase activity;0.0191381346474526!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0192372560117752!GO:0010257;NADH dehydrogenase complex assembly;0.0192372560117752!GO:0033108;mitochondrial respiratory chain complex assembly;0.0192372560117752!GO:0006519;amino acid and derivative metabolic process;0.019318504713913!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0193898340836769!GO:0030660;Golgi-associated vesicle membrane;0.0201312512785571!GO:0016741;transferase activity, transferring one-carbon groups;0.0201346354763097!GO:0008168;methyltransferase activity;0.0201555276255065!GO:0003711;transcription elongation regulator activity;0.0203285166551254!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0206439329301196!GO:0006779;porphyrin biosynthetic process;0.0207766893675738!GO:0033014;tetrapyrrole biosynthetic process;0.0207766893675738!GO:0009967;positive regulation of signal transduction;0.0212004828944857!GO:0001836;release of cytochrome c from mitochondria;0.0212004828944857!GO:0031301;integral to organelle membrane;0.0215016788223162!GO:0035035;histone acetyltransferase binding;0.0215016788223162!GO:0006740;NADPH regeneration;0.022713520954134!GO:0006098;pentose-phosphate shunt;0.022713520954134!GO:0006767;water-soluble vitamin metabolic process;0.0228844061952593!GO:0031529;ruffle organization and biogenesis;0.0230506579947023!GO:0008286;insulin receptor signaling pathway;0.0243095452934751!GO:0005581;collagen;0.0243392429179884!GO:0001527;microfibril;0.0244756192696882!GO:0003729;mRNA binding;0.024520205157712!GO:0006352;transcription initiation;0.0246782908254191!GO:0000209;protein polyubiquitination;0.0247359474480528!GO:0046039;GTP metabolic process;0.0249414652718881!GO:0006183;GTP biosynthetic process;0.0249414652718881!GO:0009303;rRNA transcription;0.0251527694709689!GO:0051338;regulation of transferase activity;0.0256389553181701!GO:0006066;alcohol metabolic process;0.0257334661407769!GO:0031272;regulation of pseudopodium formation;0.0257334661407769!GO:0031269;pseudopodium formation;0.0257334661407769!GO:0031344;regulation of cell projection organization and biogenesis;0.0257334661407769!GO:0031268;pseudopodium organization and biogenesis;0.0257334661407769!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0257334661407769!GO:0031274;positive regulation of pseudopodium formation;0.0257334661407769!GO:0008652;amino acid biosynthetic process;0.0260217400864707!GO:0005637;nuclear inner membrane;0.0260217400864707!GO:0005862;muscle thin filament tropomyosin;0.0260963463386195!GO:0006458;'de novo' protein folding;0.0261926459156835!GO:0051084;'de novo' posttranslational protein folding;0.0261926459156835!GO:0030503;regulation of cell redox homeostasis;0.0262597695764636!GO:0008139;nuclear localization sequence binding;0.0270340721101224!GO:0030057;desmosome;0.0270340721101224!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0270340721101224!GO:0044255;cellular lipid metabolic process;0.0270805008326719!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0282476698766292!GO:0005832;chaperonin-containing T-complex;0.0282552067048658!GO:0007265;Ras protein signal transduction;0.029566225016359!GO:0051540;metal cluster binding;0.0297414369159794!GO:0051536;iron-sulfur cluster binding;0.0297414369159794!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0297414369159794!GO:0000059;protein import into nucleus, docking;0.0299761370221809!GO:0051539;4 iron, 4 sulfur cluster binding;0.0299827044151933!GO:0006354;RNA elongation;0.0302872731303096!GO:0042168;heme metabolic process;0.030694541581569!GO:0030833;regulation of actin filament polymerization;0.0321030982829686!GO:0016407;acetyltransferase activity;0.0321030982829686!GO:0003923;GPI-anchor transamidase activity;0.0321133537537178!GO:0016255;attachment of GPI anchor to protein;0.0321133537537178!GO:0042765;GPI-anchor transamidase complex;0.0321133537537178!GO:0007052;mitotic spindle organization and biogenesis;0.0325132990796249!GO:0006891;intra-Golgi vesicle-mediated transport;0.0329454310299237!GO:0044438;microbody part;0.0329454310299237!GO:0044439;peroxisomal part;0.0329454310299237!GO:0016197;endosome transport;0.033576702655268!GO:0032508;DNA duplex unwinding;0.0340390089710716!GO:0032392;DNA geometric change;0.0340390089710716!GO:0032507;maintenance of cellular protein localization;0.0343437197003914!GO:0045737;positive regulation of cyclin-dependent protein kinase activity;0.0348835633980472!GO:0031418;L-ascorbic acid binding;0.0349099907885842!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0349397095208931!GO:0000428;DNA-directed RNA polymerase complex;0.0349397095208931!GO:0009116;nucleoside metabolic process;0.0356981671631072!GO:0006268;DNA unwinding during replication;0.0367073157500515!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0373841138253092!GO:0000086;G2/M transition of mitotic cell cycle;0.0374010951583625!GO:0051087;chaperone binding;0.0374948073360587!GO:0048518;positive regulation of biological process;0.0374948073360587!GO:0006302;double-strand break repair;0.0374948073360587!GO:0035258;steroid hormone receptor binding;0.0374948073360587!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0374948073360587!GO:0045047;protein targeting to ER;0.0374948073360587!GO:0005657;replication fork;0.0379295748056814!GO:0031903;microbody membrane;0.0381455376835221!GO:0005778;peroxisomal membrane;0.0381455376835221!GO:0043022;ribosome binding;0.038556143826199!GO:0030911;TPR domain binding;0.0387523513372127!GO:0006402;mRNA catabolic process;0.0387816487073737!GO:0040029;regulation of gene expression, epigenetic;0.0389078182208558!GO:0007093;mitotic cell cycle checkpoint;0.0390857085322813!GO:0030127;COPII vesicle coat;0.0391427700301833!GO:0012507;ER to Golgi transport vesicle membrane;0.0391427700301833!GO:0009147;pyrimidine nucleoside triphosphate metabolic process;0.0403718130024607!GO:0006338;chromatin remodeling;0.0404778659359582!GO:0045806;negative regulation of endocytosis;0.0405624735614608!GO:0008312;7S RNA binding;0.0405624735614608!GO:0000096;sulfur amino acid metabolic process;0.0407409756774697!GO:0003678;DNA helicase activity;0.0408375652608092!GO:0006376;mRNA splice site selection;0.0409661718450395!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0409661718450395!GO:0031124;mRNA 3'-end processing;0.0410686675716274!GO:0016272;prefoldin complex;0.0412374030159635!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0413774853439134!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0413774853439134!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0413774853439134!GO:0004860;protein kinase inhibitor activity;0.0419624590321586!GO:0008629;induction of apoptosis by intracellular signals;0.0430963582701291!GO:0033673;negative regulation of kinase activity;0.0437035639020479!GO:0006469;negative regulation of protein kinase activity;0.0437035639020479!GO:0031543;peptidyl-proline dioxygenase activity;0.0446583495286137!GO:0006220;pyrimidine nucleotide metabolic process;0.0446583495286137!GO:0030031;cell projection biogenesis;0.0446583495286137!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0448161989038578!GO:0051348;negative regulation of transferase activity;0.0450185590130792!GO:0006914;autophagy;0.0451177499753171!GO:0043549;regulation of kinase activity;0.0451834299711725!GO:0005784;translocon complex;0.0459804287312297!GO:0050811;GABA receptor binding;0.0460195488156604!GO:0007264;small GTPase mediated signal transduction;0.0461736217836363!GO:0005092;GDP-dissociation inhibitor activity;0.0464415841864519!GO:0030521;androgen receptor signaling pathway;0.0464415841864519!GO:0008154;actin polymerization and/or depolymerization;0.0464978726452172!GO:0030134;ER to Golgi transport vesicle;0.0466265949833068!GO:0006749;glutathione metabolic process;0.0468630112149297!GO:0030041;actin filament polymerization;0.0470852123035992!GO:0030128;clathrin coat of endocytic vesicle;0.0475446033329798!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0475446033329798!GO:0030122;AP-2 adaptor complex;0.0475446033329798!GO:0048468;cell development;0.0481559633738214!GO:0009119;ribonucleoside metabolic process;0.0485906085406173!GO:0006783;heme biosynthetic process;0.0489226701983272!GO:0006611;protein export from nucleus;0.0493527370590514!GO:0051085;chaperone cofactor-dependent protein folding;0.0493923814329238!GO:0008426;protein kinase C inhibitor activity;0.0494060276386356!GO:0006401;RNA catabolic process;0.0497936691897889!GO:0008538;proteasome activator activity;0.049987806678411
|sample_id=11355
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=placenta
|top_motifs=PPARG:2.19231858905;ZNF423:2.08624415923;HOX{A5,B5}:1.91220491355;TP53:1.8460401299;GLI1..3:1.6608590143;ZNF148:1.54841478896;NKX2-1,4:1.47104256114;TBX4,5:1.41906028904;ESR1:1.4001511294;TFAP4:1.35478213264;ZIC1..3:1.33521409985;TFAP2{A,C}:1.31286450483;GCM1,2:1.30814969512;PAX5:1.29203646827;TEAD1:1.25856321455;MTF1:1.1532216989;SNAI1..3:1.09763567676;NKX2-3_NKX2-5:1.06227467739;TBP:1.02341077143;HAND1,2:1.02226924237;EP300:0.92981315117;FOXM1:0.877218290959;ZNF384:0.819003743898;RXRA_VDR{dimer}:0.778079148165;AR:0.737100805775;XCPE1{core}:0.720464098415;HMX1:0.700062371001;SP1:0.697674297327;ZNF238:0.694707977744;POU3F1..4:0.66776888609;CDC5L:0.652377901199;ZEB1:0.643335168379;TFCP2:0.615581958772;RORA:0.590655007952;NR6A1:0.584928579259;SOX17:0.550585515448;EBF1:0.527681161464;HSF1,2:0.520952780595;STAT5{A,B}:0.508599084651;NR3C1:0.497609695005;TAL1_TCF{3,4,12}:0.447395785875;GZF1:0.446264886456;UFEwm:0.424666521436;ONECUT1,2:0.39252104889;HES1:0.372671119135;RXR{A,B,G}:0.368711148253;bHLH_family:0.338079213721;FOXL1:0.333794326125;FOS_FOS{B,L1}_JUN{B,D}:0.306530476911;HOXA9_MEIS1:0.300155674769;MAZ:0.299807643637;POU6F1:0.288190467925;LHX3,4:0.286423747167;POU2F1..3:0.280743070381;PBX1:0.273540752275;NR5A1,2:0.273075048292;HOX{A6,A7,B6,B7}:0.255517573512;TLX1..3_NFIC{dimer}:0.23776599106;SOX{8,9,10}:0.236951375698;RREB1:0.226858917452;FOXQ1:0.226387996719;KLF4:0.224818220033;MYOD1:0.223962018877;BACH2:0.214577195168;GTF2A1,2:0.201274550148;SMAD1..7,9:0.189089371643;IKZF1:0.187651788712;GFI1:0.162159607466;NKX2-2,8:0.144872424902;E2F1..5:0.142999205643;ALX4:0.105629555646;HIC1:0.0787373671663;HIF1A:0.0731676919902;NFIL3:0.0704837958508;HLF:0.0679600365203;FOSL2:0.0584905042271;EN1,2:0.0574136669345;NFY{A,B,C}:0.0529743055139;SPZ1:0.0477222398608;ZNF143:0.045532118663;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0342629866513;ZBTB6:0.0271884853067;YY1:-0.0275259463031;NFE2:-0.0370117328581;GTF2I:-0.0393641574213;LEF1_TCF7_TCF7L1,2:-0.0408405978338;MAFB:-0.0679534912985;DBP:-0.085684983764;ATF2:-0.10713577903;HNF1A:-0.116039368979;SOX5:-0.118352330161;HMGA1,2:-0.158192935044;GATA6:-0.161261924612;ADNP_IRX_SIX_ZHX:-0.174547075422;XBP1:-0.193849006973;HNF4A_NR2F1,2:-0.19452802129;CEBPA,B_DDIT3:-0.205036718791;FOX{F1,F2,J1}:-0.214702036028;NFE2L2:-0.226810625583;SRF:-0.23122042057;JUN:-0.233410203126;NHLH1,2:-0.237366794447;MYB:-0.258387519419;HOX{A4,D4}:-0.287422301474;TOPORS:-0.290544438216;ESRRA:-0.334336190116;OCT4_SOX2{dimer}:-0.354318172613;ARID5B:-0.361029364734;PAX8:-0.36886834395;NANOG:-0.372520859038;NFKB1_REL_RELA:-0.395941918365;RUNX1..3:-0.398448028805;PRRX1,2:-0.40132543765;ATF6:-0.402197402404;TEF:-0.411483116969;REST:-0.425733600529;NFE2L1:-0.426726358092;RFX1:-0.4318534621;PAX1,9:-0.434659952604;MYBL2:-0.451342468297;GFI1B:-0.464672986276;NKX3-2:-0.467119783792;MED-1{core}:-0.507776730862;MEF2{A,B,C,D}:-0.534205287719;EVI1:-0.535145424346;AIRE:-0.549430426595;ELK1,4_GABP{A,B1}:-0.561144061088;NR1H4:-0.583431766685;PATZ1:-0.586963311752;SREBF1,2:-0.62545947538;TFAP2B:-0.639695841409;POU1F1:-0.652701788952;FOXO1,3,4:-0.655553906199;LMO2:-0.674196085445;NANOG{mouse}:-0.676487383413;PITX1..3:-0.688829393875;ETS1,2:-0.707682153628;SOX2:-0.708388302746;SPIB:-0.713919282037;PAX2:-0.731864268404;CRX:-0.734700409212;ATF4:-0.772248678639;CUX2:-0.774915770662;NFATC1..3:-0.797957752851;MZF1:-0.826534901903;NRF1:-0.828714683541;MYFfamily:-0.838912388572;ELF1,2,4:-0.852436967285;STAT1,3:-0.855362805688;MTE{core}:-0.874144078037;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.880157690138;GATA4:-0.900401569175;VSX1,2:-0.935908531864;RBPJ:-0.93594845534;PRDM1:-0.938906483146;SPI1:-0.945029830444;PDX1:-0.947511016826;ALX1:-0.948694684301;TFDP1:-0.950260499367;FOX{D1,D2}:-0.954135649275;IRF7:-0.959326155741;STAT2,4,6:-0.99674544739;FOX{I1,J2}:-0.998105347184;PAX6:-1.02652244156;ATF5_CREB3:-1.03388502475;FOXN1:-1.10246092692;BPTF:-1.12052050968;FOXA2:-1.16545376034;IRF1,2:-1.17466582026;FOXP3:-1.19209928288;PAX3,7:-1.23016021077;TGIF1:-1.23094085233;PAX4:-1.23735967756;POU5F1:-1.23789821084;TLX2:-1.24347290036;CDX1,2,4:-1.27882447826;T:-1.2887519161;EGR1..3:-1.29076893803;BREu{core}:-1.29147040651;NKX3-1:-1.36635094974;RFX2..5_RFXANK_RFXAP:-1.37085624848;CREB1:-1.4101999386;NFIX:-1.41761499788;AHR_ARNT_ARNT2:-1.46225740444;FOXD3:-1.52362973787;ZFP161:-1.62796733252;FOXP1:-1.65799263684;DMAP1_NCOR{1,2}_SMARC:-1.67262489997;HBP1_HMGB_SSRP1_UBTF:-1.83227588493;ZBTB16:-1.85138027794;IKZF2:-2.09615119954;NKX6-1,2:-2.13806316023
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11355-117H5;search_select_hide=table117:FF:11355-117H5
}}
}}

Latest revision as of 17:54, 4 June 2020

Name:Placental Epithelial Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11386
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueplacenta
dev stageNA
sexfemale
ageNA
cell typeplacental epithelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2544
catalog numberCA230-R10f
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005834
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11386 CAGE DRX008405 DRR009277
Accession ID Hg19

Library idBAMCTSS
CNhs11386 DRZ000702 DRZ002087
Accession ID Hg38

Library idBAMCTSS
CNhs11386 DRZ012052 DRZ013437
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005834
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10006.CGTACG sRNA-Seq DRX037087 DRR041453
Accession ID Hg19

Library idBAMCTSS
SRhi10006.CGTACG DRZ007095


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.188
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0182
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.426
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.884
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.02
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.269
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.257
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.609
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.672
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.636
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue1.467
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.759
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.331
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.426
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.388
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.426
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.778
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.636
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11386

Jaspar motifP-value
MA0002.20.745
MA0003.10.221
MA0004.10.681
MA0006.10.109
MA0007.10.00265
MA0009.10.382
MA0014.10.556
MA0017.10.766
MA0018.20.00508
MA0019.10.0913
MA0024.10.325
MA0025.10.55
MA0027.10.813
MA0028.10.266
MA0029.10.359
MA0030.10.282
MA0031.10.2
MA0035.20.657
MA0038.10.238
MA0039.20.124
MA0040.10.543
MA0041.10.491
MA0042.10.738
MA0043.10.00195
MA0046.10.571
MA0047.20.915
MA0048.10.729
MA0050.13.64259e-8
MA0051.16.30029e-5
MA0052.10.872
MA0055.10.0687
MA0057.10.624
MA0058.10.746
MA0059.10.267
MA0060.10.274
MA0061.10.93
MA0062.20.00305
MA0065.20.0762
MA0066.10.181
MA0067.10.0254
MA0068.10.0357
MA0069.10.728
MA0070.10.187
MA0071.10.294
MA0072.10.447
MA0073.10.442
MA0074.10.519
MA0076.10.0519
MA0077.10.492
MA0078.10.536
MA0079.20.642
MA0080.21.06908e-8
MA0081.10.00892
MA0083.10.465
MA0084.10.856
MA0087.10.471
MA0088.10.416
MA0090.12.1633e-4
MA0091.10.13
MA0092.10.333
MA0093.10.702
MA0099.29.8035e-5
MA0100.10.134
MA0101.10.0643
MA0102.20.00148
MA0103.10.0128
MA0104.20.611
MA0105.10.346
MA0106.10.0754
MA0107.10.0428
MA0108.20.0164
MA0111.10.921
MA0112.20.00308
MA0113.16.6057e-4
MA0114.10.238
MA0115.10.667
MA0116.10.0439
MA0117.10.58
MA0119.10.28
MA0122.10.729
MA0124.10.474
MA0125.10.89
MA0131.10.252
MA0135.10.743
MA0136.11.81404e-8
MA0137.20.0489
MA0138.20.207
MA0139.10.571
MA0140.10.796
MA0141.10.314
MA0142.10.387
MA0143.10.549
MA0144.10.866
MA0145.10.153
MA0146.10.0361
MA0147.10.905
MA0148.10.988
MA0149.10.5
MA0150.10.953
MA0152.10.811
MA0153.10.355
MA0154.10.0824
MA0155.10.165
MA0156.13.30076e-7
MA0157.10.247
MA0159.10.209
MA0160.10.488
MA0162.10.0557
MA0163.10.0213
MA0164.10.74
MA0258.10.0134
MA0259.10.795



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11386

Novel motifP-value
10.489
100.799
1000.327
1010.861
1020.508
1030.135
1040.606
1050.279
1060.0677
1070.079
1080.55
1090.0108
110.11
1100.099
1110.903
1120.623
1130.151
1140.351
1150.848
1160.326
1170.423
1180.257
1190.182
120.809
1200.12
1210.566
1220.173
1230.319
1240.951
1250.816
1260.532
1270.502
1280.674
1290.184
130.176
1300.0776
1310.476
1320.869
1330.102
1340.349
1350.507
1360.372
1370.323
1380.0578
1390.464
140.685
1400.879
1410.422
1420.573
1430.406
1440.815
1450.734
1460.0636
1470.141
1480.9
1490.0641
150.325
1500.381
1510.461
1520.0587
1530.541
1540.588
1550.305
1560.544
1570.465
1580.917
1590.539
160.0319
1600.0172
1610.186
1620.0561
1630.532
1640.318
1650.772
1660.588
1670.204
1680.356
1690.0662
170.0412
180.0966
190.163
20.215
200.994
210.817
220.0787
230.23
240.805
250.977
260.131
270.326
280.7
290.209
30.706
300.186
310.419
327.49436e-9
330.169
340.44
350.744
360.489
370.168
380.374
390.0899
40.196
400.0056
410.607
420.965
430.236
440.606
450.231
460.272
470.433
480.109
490.26
50.713
500.553
510.259
520.431
530.841
540.431
550.984
560.327
570.361
580.854
590.0526
60.953
600.399
610.867
620.921
630.334
640.155
650.234
660.274
670.0803
680.342
697.42423e-4
70.398
700.231
710.127
720.794
730.0489
740.179
750.203
760.411
770.0201
780.453
790.184
80.181
800.866
810.763
820.351
830.967
840.414
850.355
860.706
870.37
880.412
890.147
90.488
900.162
910.0557
920.994
930.966
940.365
950.185
960.856
970.242
980.434
990.0192



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11386


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0002577 (placental epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001987 (placenta)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000136 (human placental epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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