FF:11609-120I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005741 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008320;DRR009192;DRZ000617;DRZ002002;DRZ011967;DRZ013352 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005389,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0010317,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000255,CL:0000306,CL:0002222,CL:0002224 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000085 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
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FP90!0.23!14.38!ZFP90;;chr18:53255415..53255491,-!p1@TCF4!0.23!12.40!TCF4;;chr10:114710098..114710130,+!p2@TCF7L2!0.23!11.01!TCF7L2;;chr11:65479702..65479731,+!p1@KAT5!0.23!9.27!KAT5;;chr8:28243661..28243709,-!p1@ZNF395!0.23!8.23!ZNF395;;chr19:56152437..56152467,+!p3@ZNF580!0.23!7.19!ZNF580;;chr2:60780753..60780800,-!p1@BCL11A!0.23!6.84!BCL11A;;chr17:16557128..16557174,-!p1@ZNF624!0.23!6.26!ZNF624;;chr19:11959532..11959593,+!p1@ZNF439!0.23!5.22!ZNF439;;chr17:41277372..41277418,-!p1@BRCA1!0.23!4.87!BRCA1;;chr12:104531854..104531893,-!p2@NFYB!0.23!4.87!NFYB;;chr19:37960240..37960299,+!p1@ZNF570!0.23!4.75!ZNF570;;chr19:44455368..44455396,+!p1@ZNF221!0.23!4.52!ZNF221;;chr7:150945754..150945789,-!p2@SMARCD3!0.23!3.94!SMARCD3;;chr7:42276822..42276895,-!p2@GLI3!0.23!3.83!GLI3;;chr3:187463220..187463232,-!p3@BCL6!0.23!3.83!BCL6;;chr19:20188776..20188826,+!p1@ZNF90!0.23!3.36!ZNF90;;chr2:42795651..42795676,+!p3@MTA3!0.23!3.25!MTA3;;chr19:53662295..53662319,-!p1@ZNF347!0.23!3.13!ZNF347;;chr3:12329358..12329393,+!p3@PPARG!0.23!3.01!PPARG;;chr9:32550839..32550962,-!p3@TOPORS!0.23!3.01!TOPORS;;chr3:114819124..114819200,-!p3@ZBTB20!0.23!2.78!ZBTB20;;chr4:57774018..57774040,+!p3@REST!0.23!2.78!REST;;chr7:99102592..99102620,+!p3@ZKSCAN5!0.23!2.55!ZKSCAN5;;chr4:38665703..38665713,+!p5@KLF3!0.23!2.20!KLF3;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.23!2.20!ZNF699;;chr12:57400227..57400245,-!p2@ZBTB39!0.23!2.20!ZBTB39;;chr19:21265028..21265052,+!p2@ZNF714!0.23!1.97!ZNF714;;chr19:17356436..17356481,-!p3@NR2F6!0.23!1.85!NR2F6;;chr18:74072572..74072588,-!p2@ZNF516!0.23!1.62!ZNF516;;chr12:50479101..50479108,+!p3@SMARCD1!0.23!1.62!SMARCD1;;chr14:105886300..105886316,+!p2@MTA1!0.23!1.62!MTA1;;chr3:40547505..40547545,+!p2@ZNF620!0.23!1.62!ZNF620;;chr12:51566592..51566617,-!p3@TFCP2!0.23!1.51!TFCP2;;chr15:57211634..57211657,+!p5@TCF12!0.23!1.51!TCF12;;chr19:53496806..53496848,-!p2@ZNF702P!0.23!1.51!ZNF702P;;chr1:33004996..33005017,+!p3@ZBTB8A!0.23!1.28!ZBTB8A;;chr6:45390343..45390388,+!p10@RUNX2!0.23!1.28!RUNX2;;chr15:96869114..96869160,+!p11@NR2F2!0.23!1.28!NR2F2;;chr1:164528297..164528309,+!p9@PBX1!0.23!1.16!PBX1;;chr12:125003087..125003141,-!p4@NCOR2!0.23!1.16!NCOR2;;chr17:41622834..41622883,-!p6@ETV4!0.23!1.04!ETV4;;chr1:114301755..114301796,-!p3@PHTF1!0.23!0.93!PHTF1;;chr3:170076223..170076242,+!p6@SKIL!0.23!0.93!SKIL;;chr10:44144219..44144230,-!p5@ZNF32!0.23!0.81!ZNF32;;chr11:16629261..16629284,-!p1@SOX6!0.23!0.70!SOX6;;chr11:31832539..31832548,-!p16@PAX6!0.23!0.70!PAX6;;chr12:103352326..103352351,+!p3@ASCL1!0.23!0.70!ASCL1;;chr12:109747023..109747033,-!p3@FOXN4!0.23!0.70!FOXN4;;chr12:24715342..24715354,-!p4@SOX5!0.23!0.70!SOX5;;chr12:96588425..96588432,+!p8@ELK3!0.23!0.70!ELK3;;chr14:69263043..69263069,-!p8@ZFP36L1!0.23!0.70!ZFP36L1;;chr2:100721881..100721904,-!p6@AFF3!0.23!0.70!AFF3;;chr2:145275982..145276003,-!p7@ZEB2!0.23!0.70!ZEB2;;chr2:16080635..16080650,+!p4@MYCN!0.23!0.70!MYCN;;chr2:208030614..208030625,-!p9@KLF7!0.23!0.70!KLF7;;chr2:25475185..25475196,-!p15@DNMT3A!0.23!0.70!DNMT3A;;chr2:85980868..85980880,+!p12@ATOH8!0.23!0.70!ATOH8;;chr3:71355138..71355149,-!p41@FOXP1!0.23!0.70!FOXP1;;chr4:109088940..109089037,-!p4@LEF1!0.23!0.70!LEF1;;chr4:109089901..109089930,-!p3@LEF1!0.23!0.70!LEF1;;chr19:50922187..50922204,+!p1@SPIB!0.23!0.70!SPIB;;chr1:214161600..214161606,+!p7@PROX1!0.23!0.70!PROX1;;chr15:57511589..57511608,+!p4@TCF12!0.23!0.70!TCF12;;chr15:90294087..90294115,-!p1@MESP1!0.23!0.70!MESP1;;chr16:79633867..79633872,-!p16@MAF!0.23!0.70!MAF;;chr16:79634447..79634462,-!p8@MAF!0.23!0.70!MAF;;chr17:41622982..41623001,-!p11@ETV4!0.23!0.70!ETV4;;chr19:12595565..12595576,-!p3@ZNF709!0.23!0.70!ZNF709;;chr19:19976620..19976631,+!p4@ZNF253!0.23!0.70!ZNF253;;chr5:124082548..124082571,-!p9@ZNF608!0.23!0.70!ZNF608;;chr5:92923160..92923166,+!p23@NR2F1!0.23!0.70!NR2F1;;chr6:21597499..21597513,+!p16@SOX4!0.23!0.70!SOX4;;chr6:45390137..45390148,+!p12@RUNX2!0.23!0.70!RUNX2;;chr6:45390399..45390418,+!p15@RUNX2!0.23!0.70!RUNX2;;chr6:99282461..99282472,+!p7@POU3F2!0.23!0.70!POU3F2;;chr7:14026063..14026091,-!p10@ETV1!0.23!0.70!ETV1;;chr8:86089472..86089483,+!p9@E2F5!0.23!0.70!E2F5;;chr9:2159850..2159880,+!p14@SMARCA2!0.23!0.70!SMARCA2;;chr9:126777702..126777716,+!p5@LHX2!0.23!0.70!LHX2;;chrX:84498946..84498955,+!p4@ZNF711!0.23!0.70!ZNF711;;chr9:126777688..126777700,+!p6@LHX2!0.23!0.70!LHX2;;chrX:84498924..84498935,+!p5@ZNF711!0.23!0.70!ZNF711;;chr12:53845879..53845894,+!p1@PCBP2!0.22!1059.95!PCBP2;;chr1:8938709..8938720,-!p3@ENO1!0.22!73.27!ENO1;;chr16:30798492..30798535,-!p1@ZNF629!0.22!23.30!ZNF629;;chr19:17356697..17356762,-!p1@NR2F6!0.22!19.94!NR2F6;;chr19:9731872..9731915,-!p1@ZNF561!0.22!18.78!ZNF561;;chr6:43139153..43139232,+!p1@SRF!0.22!13.80!SRF;;chr14:55493763..55493824,-!p1@WDHD1!0.22!10.55!WDHD1;;chr1:227751231..227751273,+!p1@ZNF678!0.22!8.93!ZNF678;;chr4:146859927..146860055,-!p1@ZNF827!0.22!8.35!ZNF827;;chr19:52643169..52643199,-!p1@ZNF616!0.22!8.12!ZNF616;;chr19:36545128..36545203,-!p1@THAP8!0.22!6.26!THAP8;;chr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| |expression_enrichment_score=chr9:77112244..77112262,+!p1@RORB!2.44!303.04!RORB;;chr3:181429704..181429722,+!p1@SOX2!2.24!170.88!SOX2;;chr4:8873545..8873583,-!p1@HMX1!2.01!100.86!HMX1;;chr18:56940611..56940660,-!p1@RAX!2.00!98.66!RAX;;chr11:31839488..31839515,-!p3@PAX6!1.92!81.96!PAX6;;chr1:2461692..2461710,-!p1@HES5!1.87!73.15!HES5;;chr12:103351444..103351461,+!p1@ASCL1!1.85!70.25!ASCL1;;chr2:45168834..45168847,+!p2@SIX3!1.83!65.85!SIX3;;chr2:45169193..45169219,+!p3@SIX3!1.76!57.04!SIX3;;chr3:181429741..181429767,+!p2@SOX2!1.74!54.37!SOX2;;chr2:45168875..45168916,+!p1@SIX3!1.71!49.85!SIX3;;chr13:72441315..72441454,-!p1@DACH1!1.62!78.83!DACH1;;chr13:100634031..100634045,+!p1@ZIC2!1.62!40.34!ZIC2;;chr9:126774018..126774055,+!p1@LHX2!1.59!38.26!LHX2;;chr11:31832658..31832681,-!p1@PAX6!1.59!37.56!PAX6;;chr14:29235961..29236008,+!p1@FOXG1!1.56!35.24!FOXG1;;chr1:214161272..214161322,+!p1@PROX1!1.55!48.00!PROX1;;chrX:139587228..139587234,-!p1@SOX3!1.55!34.08!SOX3;;chr3:147127177..147127194,+!p2@ZIC1!1.54!33.97!ZIC1;;chr14:60975883..60975911,+!p1@SIX6!1.54!33.62!SIX6;;chr1:197886461..197886558,+!p1@LHX9!1.53!32.81!LHX9;;chr3:62358596..62358618,-!p3@FEZF2!1.50!30.95!FEZF2;;chr3:147127142..147127168,+!p1@ZIC1!1.43!25.97!ZIC1;;chr6:45296048..45296082,+!p1@RUNX2!1.41!28.52!RUNX2;;chr2:5832508..5832524,+!p1@SOX11!1.41!24.81!SOX11;;chr4:8873531..8873542,-!p4@HMX1!1.39!23.77!HMX1;;chr8:80679993..80680011,-!p1@HEY1!1.38!32.81!HEY1;;chr14:29236269..29236285,+!p3@FOXG1!1.38!22.72!FOXG1;;chr11:31832862..31832884,-!p2@PAX6!1.35!21.33!PAX6;;chr7:35293685..35293718,-!p1@TBX20!1.35!21.33!TBX20;;chrX:136648279..136648295,+!p1@ZIC3!1.33!20.40!ZIC3;;chr14:74706150..74706155,+!p1@VSX2!1.29!18.66!VSX2;;chr5:92918919..92918942,+!p1@NR2F1!1.28!78.48!NR2F1;;chr16:79634624..79634642,-!p1@MAF!1.28!69.33!MAF;;chrX:136648643..136648711,+!p2@ZIC3!1.28!18.09!ZIC3;;chr18:56940663..56940691,-!p2@RAX!1.27!17.62!RAX;;chr19:48325184..48325211,+!p1@CRX!1.26!17.39!CRX;;chr9:126774058..126774081,+!p3@LHX2!1.26!17.27!LHX2;;chr3:62358748..62358751,-!p7@FEZF2!1.26!17.16!FEZF2;;chr12:66218255..66218304,+!p3@HMGA2!1.23!42.31!HMGA2;;chr2:63277948..63277974,+!p1@OTX1!1.23!16.00!OTX1;;chr9:126773880..126773895,+!p2@LHX2!1.22!15.53!LHX2;;chr2:45169233..45169244,+!p10@SIX3!1.22!15.42!SIX3;;chr14:29234581..29234601,+!p2@FOXG1!1.21!15.19!FOXG1;;chr2:45169143..45169167,+!p5@SIX3!1.20!14.72!SIX3;;chr14:60975858..60975869,+!p2@SIX6!1.19!14.61!SIX6;;chr2:45169179..45169190,+!p8@SIX3!1.18!14.14!SIX3;;chr2:182545234..182545252,-!p1@NEUROD1!1.17!13.80!NEUROD1;;chr16:79633894..79633954,-!p3@MAF!1.15!25.16!MAF;;chr2:88752207..88752218,-!p1@FOXI3!1.15!12.98!FOXI3;;chr17:59477233..59477263,+!p1@TBX2!1.13!38.95!TBX2;;chr13:100623375..100623425,-!p1@ZIC5!1.12!12.29!ZIC5;;chr12:66218183..66218209,+!p4@HMGA2!1.10!22.26!HMGA2;;chr10:104001259..104001274,-!p1@PITX3!1.10!11.71!PITX3;;chr11:31832807..31832823,-!p4@PAX6!1.10!11.71!PAX6;;chr11:31839453..31839462,-!p9@PAX6!1.09!11.36!PAX6;;chr17:70117153..70117174,+!p1@SOX9!1.08!114.89!SOX9;;chr11:63684602..63684664,-!p1@RCOR2!1.08!22.14!RCOR2;;chr12:66218212..66218244,+!p5@HMGA2!1.07!15.53!HMGA2;;chr5:92918956..92918969,+!p4@NR2F1!1.07!11.94!NR2F1;;chr13:72441074..72441172,-!p2@DACH1!1.07!10.78!DACH1;;chr2:45168856..45168867,+!p7@SIX3!1.07!10.67!SIX3;;chr2:239148671..239148686,-!p1@HES6!1.06!38.72!HES6;;chr8:60031682..60031710,-!p2@TOX!1.06!17.16!TOX;;chr6:34204672..34204692,+!p1@HMGA1!1.04!1120.70!HMGA1;;chr17:59477197..59477212,+!p2@TBX2!1.04!17.27!TBX2;;chr12:66218598..66218645,+!p2@HMGA2!1.03!45.33!HMGA2;;chr2:71127699..71127744,+!p1@VAX2!1.03!20.17!VAX2;;chr3:147111231..147111281,+!p3@ZIC1!1.03!9.62!ZIC1;;chr8:60031619..60031676,-!p1@TOX!1.02!20.64!TOX;;chr19:46800289..46800327,+!p2@HIF3A!1.02!9.39!HIF3A;;chr19:49864746..49864780,-!p2@TEAD2!1.01!12.75!TEAD2;;chr3:25470156..25470227,+!p2@RARB!1.01!9.27!RARB;;chr13:100638100..100638115,+!p4@ZIC2!1.01!9.27!ZIC2;;chr5:124082322..124082364,-!p1@ZNF608!1.00!23.42!ZNF608;;chr2:16080659..16080685,+!p1@MYCN!1.00!9.04!MYCN;;chr3:147139053..147139112,+!p5@ZIC1!1.00!9.04!ZIC1;;chr11:31825588..31825613,-!p8@PAX6!1.00!9.04!PAX6;;chr14:24553835..24553850,-!p1@NRL!1.00!8.93!NRL;;chr14:60975644..60975673,+!p3@SIX6!0.99!8.81!SIX6;;chr3:62359214..62359232,-!p1@FEZF2!0.99!8.69!FEZF2;;chr1:151032922..151032951,+!p2@MLLT11!0.98!14.38!MLLT11;;chr19:53496768..53496799,-!p1@ZNF702P!0.98!13.33!ZNF702P;;chr20:20348740..20348757,+!p1@INSM1!0.98!8.46!INSM1;;chr14:57277178..57277203,-!p1@OTX2!0.98!8.46!OTX2;;chr11:31832610..31832639,-!p5@PAX6!0.97!8.23!PAX6;;chr12:54779511..54779577,-!p5@ZNF385A!0.96!8.12!ZNF385A;;chr1:151032860..151032918,+!p1@MLLT11!0.95!98.19!MLLT11;;chr6:21597765..21597779,+!p2@SOX4!0.95!65.96!SOX4;;chr8:80680024..80680046,-!p2@HEY1!0.95!9.04!HEY1;;chrX:136648297..136648319,+!p3@ZIC3!0.95!7.88!ZIC3;;chr8:60031809..60031835,-!p4@TOX!0.94!9.85!TOX;;chr5:124082279..124082319,-!p3@ZNF608!0.94!9.39!ZNF608;;chr11:31832581..31832601,-!p7@PAX6!0.94!7.77!PAX6;;chr14:29237009..29237049,+!p4@FOXG1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FP90!0.23!14.38!ZFP90;;chr18:53255415..53255491,-!p1@TCF4!0.23!12.40!TCF4;;chr10:114710098..114710130,+!p2@TCF7L2!0.23!11.01!TCF7L2;;chr11:65479702..65479731,+!p1@KAT5!0.23!9.27!KAT5;;chr8:28243661..28243709,-!p1@ZNF395!0.23!8.23!ZNF395;;chr19:56152437..56152467,+!p3@ZNF580!0.23!7.19!ZNF580;;chr2:60780753..60780800,-!p1@BCL11A!0.23!6.84!BCL11A;;chr17:16557128..16557174,-!p1@ZNF624!0.23!6.26!ZNF624;;chr19:11959532..11959593,+!p1@ZNF439!0.23!5.22!ZNF439;;chr17:41277372..41277418,-!p1@BRCA1!0.23!4.87!BRCA1;;chr12:104531854..104531893,-!p2@NFYB!0.23!4.87!NFYB;;chr19:37960240..37960299,+!p1@ZNF570!0.23!4.75!ZNF570;;chr19:44455368..44455396,+!p1@ZNF221!0.23!4.52!ZNF221;;chr7:150945754..150945789,-!p2@SMARCD3!0.23!3.94!SMARCD3;;chr7:42276822..42276895,-!p2@GLI3!0.23!3.83!GLI3;;chr3:187463220..187463232,-!p3@BCL6!0.23!3.83!BCL6;;chr19:20188776..20188826,+!p1@ZNF90!0.23!3.36!ZNF90;;chr2:42795651..42795676,+!p3@MTA3!0.23!3.25!MTA3;;chr19:53662295..53662319,-!p1@ZNF347!0.23!3.13!ZNF347;;chr3:12329358..12329393,+!p3@PPARG!0.23!3.01!PPARG;;chr9:32550839..32550962,-!p3@TOPORS!0.23!3.01!TOPORS;;chr3:114819124..114819200,-!p3@ZBTB20!0.23!2.78!ZBTB20;;chr4:57774018..57774040,+!p3@REST!0.23!2.78!REST;;chr7:99102592..99102620,+!p3@ZKSCAN5!0.23!2.55!ZKSCAN5;;chr4:38665703..38665713,+!p5@KLF3!0.23!2.20!KLF3;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.23!2.20!ZNF699;;chr12:57400227..57400245,-!p2@ZBTB39!0.23!2.20!ZBTB39;;chr19:21265028..21265052,+!p2@ZNF714!0.23!1.97!ZNF714;;chr19:17356436..17356481,-!p3@NR2F6!0.23!1.85!NR2F6;;chr18:74072572..74072588,-!p2@ZNF516!0.23!1.62!ZNF516;;chr12:50479101..50479108,+!p3@SMARCD1!0.23!1.62!SMARCD1;;chr14:105886300..105886316,+!p2@MTA1!0.23!1.62!MTA1;;chr3:40547505..40547545,+!p2@ZNF620!0.23!1.62!ZNF620;;chr12:51566592..51566617,-!p3@TFCP2!0.23!1.51!TFCP2;;chr15:57211634..57211657,+!p5@TCF12!0.23!1.51!TCF12;;chr19:53496806..53496848,-!p2@ZNF702P!0.23!1.51!ZNF702P;;chr1:33004996..33005017,+!p3@ZBTB8A!0.23!1.28!ZBTB8A;;chr6:45390343..45390388,+!p10@RUNX2!0.23!1.28!RUNX2;;chr15:96869114..96869160,+!p11@NR2F2!0.23!1.28!NR2F2;;chr1:164528297..164528309,+!p9@PBX1!0.23!1.16!PBX1;;chr12:125003087..125003141,-!p4@NCOR2!0.23!1.16!NCOR2;;chr17:41622834..41622883,-!p6@ETV4!0.23!1.04!ETV4;;chr1:114301755..114301796,-!p3@PHTF1!0.23!0.93!PHTF1;;chr3:170076223..170076242,+!p6@SKIL!0.23!0.93!SKIL;;chr10:44144219..44144230,-!p5@ZNF32!0.23!0.81!ZNF32;;chr11:16629261..16629284,-!p1@SOX6!0.23!0.70!SOX6;;chr11:31832539..31832548,-!p16@PAX6!0.23!0.70!PAX6;;chr12:103352326..103352351,+!p3@ASCL1!0.23!0.70!ASCL1;;chr12:109747023..109747033,-!p3@FOXN4!0.23!0.70!FOXN4;;chr12:24715342..24715354,-!p4@SOX5!0.23!0.70!SOX5;;chr12:96588425..96588432,+!p8@ELK3!0.23!0.70!ELK3;;chr14:69263043..69263069,-!p8@ZFP36L1!0.23!0.70!ZFP36L1;;chr2:100721881..100721904,-!p6@AFF3!0.23!0.70!AFF3;;chr2:145275982..145276003,-!p7@ZEB2!0.23!0.70!ZEB2;;chr2:16080635..16080650,+!p4@MYCN!0.23!0.70!MYCN;;chr2:208030614..208030625,-!p9@KLF7!0.23!0.70!KLF7;;chr2:25475185..25475196,-!p15@DNMT3A!0.23!0.70!DNMT3A;;chr2:85980868..85980880,+!p12@ATOH8!0.23!0.70!ATOH8;;chr3:71355138..71355149,-!p41@FOXP1!0.23!0.70!FOXP1;;chr4:109088940..109089037,-!p4@LEF1!0.23!0.70!LEF1;;chr4:109089901..109089930,-!p3@LEF1!0.23!0.70!LEF1;;chr19:50922187..50922204,+!p1@SPIB!0.23!0.70!SPIB;;chr1:214161600..214161606,+!p7@PROX1!0.23!0.70!PROX1;;chr15:57511589..57511608,+!p4@TCF12!0.23!0.70!TCF12;;chr15:90294087..90294115,-!p1@MESP1!0.23!0.70!MESP1;;chr16:79633867..79633872,-!p16@MAF!0.23!0.70!MAF;;chr16:79634447..79634462,-!p8@MAF!0.23!0.70!MAF;;chr17:41622982..41623001,-!p11@ETV4!0.23!0.70!ETV4;;chr19:12595565..12595576,-!p3@ZNF709!0.23!0.70!ZNF709;;chr19:19976620..19976631,+!p4@ZNF253!0.23!0.70!ZNF253;;chr5:124082548..124082571,-!p9@ZNF608!0.23!0.70!ZNF608;;chr5:92923160..92923166,+!p23@NR2F1!0.23!0.70!NR2F1;;chr6:21597499..21597513,+!p16@SOX4!0.23!0.70!SOX4;;chr6:45390137..45390148,+!p12@RUNX2!0.23!0.70!RUNX2;;chr6:45390399..45390418,+!p15@RUNX2!0.23!0.70!RUNX2;;chr6:99282461..99282472,+!p7@POU3F2!0.23!0.70!POU3F2;;chr7:14026063..14026091,-!p10@ETV1!0.23!0.70!ETV1;;chr8:86089472..86089483,+!p9@E2F5!0.23!0.70!E2F5;;chr9:2159850..2159880,+!p14@SMARCA2!0.23!0.70!SMARCA2;;chr9:126777702..126777716,+!p5@LHX2!0.23!0.70!LHX2;;chrX:84498946..84498955,+!p4@ZNF711!0.23!0.70!ZNF711;;chr9:126777688..126777700,+!p6@LHX2!0.23!0.70!LHX2;;chrX:84498924..84498935,+!p5@ZNF711!0.23!0.70!ZNF711;;chr12:53845879..53845894,+!p1@PCBP2!0.22!1059.95!PCBP2;;chr1:8938709..8938720,-!p3@ENO1!0.22!73.27!ENO1;;chr16:30798492..30798535,-!p1@ZNF629!0.22!23.30!ZNF629;;chr19:17356697..17356762,-!p1@NR2F6!0.22!19.94!NR2F6;;chr19:9731872..9731915,-!p1@ZNF561!0.22!18.78!ZNF561;;chr6:43139153..43139232,+!p1@SRF!0.22!13.80!SRF;;chr14:55493763..55493824,-!p1@WDHD1!0.22!10.55!WDHD1;;chr1:227751231..227751273,+!p1@ZNF678!0.22!8.93!ZNF678;;chr4:146859927..146860055,-!p1@ZNF827!0.22!8.35!ZNF827;;chr19:52643169..52643199,-!p1@ZNF616!0.22!8.12!ZNF616;;chr19:36545128..36545203,-!p1@THAP8!0.22!6.26!THAP8;;chr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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002224;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001801 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 36: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor2.CNhs12568.11609-120I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11609-120I7 | |id=FF:11609-120I7 | ||
|is_a=EFO:0002091;;FF:0000085 | |is_a=EFO:0002091;;FF:0000085 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12568 | |||
|library_id_phase_based=2:CNhs12568 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11609 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11609 | |||
|name=Lens Epithelial Cells, donor2 | |name=Lens Epithelial Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 44: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12568,LSID917,release011,COMPLETED | |profile_hcage=CNhs12568,LSID917,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number=SC6555 | |rna_catalog_number=SC6555 | ||
| Line 59: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 80: | Line 100: | ||
|top_motifs=NANOG:2.85379555922;PAX1,9:2.69123322933;SOX2:2.42607685551;T:2.21164932884;RBPJ:1.98299030759;NKX2-1,4:1.86608885439;GFI1:1.76234102644;ZIC1..3:1.75114056344;OCT4_SOX2{dimer}:1.63681701236;LHX3,4:1.5390403069;SOX{8,9,10}:1.48925696968;SOX17:1.45319473946;SP1:1.42537245533;VSX1,2:1.37526683105;NFY{A,B,C}:1.32036375753;GTF2A1,2:1.28414176308;PBX1:1.26928381328;FOXM1:1.24820076219;PATZ1:1.24041229649;ALX1:1.22951991181;TFDP1:1.22337065542;PAX5:1.22044082635;MZF1:1.19984268064;POU5F1:1.19766270917;MAZ:1.09659522;EBF1:1.08160720978;ZFP161:1.0739074322;PRRX1,2:1.0623779868;NKX2-3_NKX2-5:1.05683105506;HOX{A6,A7,B6,B7}:1.04640027335;MTE{core}:1.03040005565;LEF1_TCF7_TCF7L1,2:1.02841346592;ONECUT1,2:1.0261508476;HOX{A4,D4}:0.994024298258;GFI1B:0.979369352607;RREB1:0.97103180807;RORA:0.958334006181;ADNP_IRX_SIX_ZHX:0.929783943466;NHLH1,2:0.914019350568;STAT1,3:0.909053422209;CDX1,2,4:0.896447973127;NKX6-1,2:0.890677141452;GTF2I:0.880013770336;RFX1:0.853306208;CUX2:0.785246550716;LMO2:0.745366901872;TLX1..3_NFIC{dimer}:0.73780963632;DBP:0.698854574735;CRX:0.692874417409;XCPE1{core}:0.690552124828;RFX2..5_RFXANK_RFXAP:0.606704315497;ZBTB6:0.603073147472;POU1F1:0.594108780458;EVI1:0.58623985621;EGR1..3:0.584880484443;HIC1:0.577309865676;NRF1:0.556785093254;ZNF384:0.553085044443;CDC5L:0.550053154031;ZNF143:0.472502825056;JUN:0.47224625028;TFAP2B:0.453634069304;EP300:0.431632516153;TFAP4:0.413514763997;AHR_ARNT_ARNT2:0.413482980231;MED-1{core}:0.385077789771;MYFfamily:0.382849228825;PAX6:0.38075512186;E2F1..5:0.373049101504;PRDM1:0.367953144976;REST:0.333191363542;HAND1,2:0.292806348401;MYOD1:0.270790988869;GATA4:0.264744645327;SREBF1,2:0.250710355423;TGIF1:0.240871052092;NR3C1:0.234682531581;HNF4A_NR2F1,2:0.206299141057;KLF4:0.201459402801;SMAD1..7,9:0.169278822457;TEAD1:0.168130524084;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.164790030922;PAX8:0.152606746662;NFE2:0.135315180787;NKX3-1:0.121510390276;PAX4:0.108433879197;TBP:0.104550260824;HOX{A5,B5}:0.103289393816;BPTF:0.0944549284775;TFCP2:0.0919179626891;YY1:0.0672646057492;ESRRA:0.0634652297419;FOXP1:0.0567675590263;ZEB1:0.0509786746587;FOXP3:0.040913209617;TAL1_TCF{3,4,12}:0.0277766467251;FOSL2:0.0197647015863;POU3F1..4:0.0031443104297;SOX5:-0.0207010013873;TFAP2{A,C}:-0.0254888846564;RXR{A,B,G}:-0.0294278841389;NFATC1..3:-0.0308515536536;HNF1A:-0.0408607381042;MYBL2:-0.0624116675226;BREu{core}:-0.0695820969786;ELK1,4_GABP{A,B1}:-0.07898932633;NR1H4:-0.0917697439702;HSF1,2:-0.0990700812571;GCM1,2:-0.105768047877;IKZF1:-0.114541942508;HMX1:-0.11498679717;SRF:-0.132490750007;ATF2:-0.134520261736;RUNX1..3:-0.166750020354;TP53:-0.167223105345;MYB:-0.168071710301;MEF2{A,B,C,D}:-0.181177182426;HIF1A:-0.198802928052;FOXQ1:-0.212024996961;FOX{I1,J2}:-0.212309327209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.216127014572;POU2F1..3:-0.222966982376;FOS_FOS{B,L1}_JUN{B,D}:-0.22354404941;BACH2:-0.230905559238;POU6F1:-0.238753864561;SNAI1..3:-0.24614171694;NFIL3:-0.250360427406;ZNF148:-0.250938639974;IKZF2:-0.251735582486;NKX3-2:-0.258432454985;FOXL1:-0.262274733208;ZNF423:-0.262329877031;EN1,2:-0.262861054983;MTF1:-0.302431658961;ZBTB16:-0.319807012335;NR6A1:-0.322071996613;NFKB1_REL_RELA:-0.333113671878;GZF1:-0.336572948695;PDX1:-0.339269870059;UFEwm:-0.342430332332;NR5A1,2:-0.35136356496;NFE2L2:-0.355683476763;STAT5{A,B}:-0.370734622365;NFIX:-0.38087832894;STAT2,4,6:-0.390788722458;FOXN1:-0.397804877038;DMAP1_NCOR{1,2}_SMARC:-0.429914459402;TBX4,5:-0.457050472849;FOXA2:-0.459968967516;PITX1..3:-0.470542258948;IRF1,2:-0.475110331371;GATA6:-0.475773124121;CREB1:-0.506621923487;ATF4:-0.519407427714;IRF7:-0.528538703594;FOXD3:-0.533346525993;GLI1..3:-0.534776490717;TEF:-0.558447421201;XBP1:-0.559236923142;TOPORS:-0.56421218307;ALX4:-0.568243427151;MAFB:-0.576249731904;PAX2:-0.577431119093;CEBPA,B_DDIT3:-0.592951009306;FOX{D1,D2}:-0.606184688103;ARID5B:-0.611354322632;FOXO1,3,4:-0.627206466934;NKX2-2,8:-0.646413024531;SPIB:-0.655653863385;HMGA1,2:-0.666918096143;SPI1:-0.702139523604;AIRE:-0.730718873265;ZNF238:-0.758785528039;HLF:-0.763213233193;ELF1,2,4:-0.767558991038;ESR1:-0.781434172162;FOX{F1,F2,J1}:-0.786605517644;SPZ1:-0.795264397187;HOXA9_MEIS1:-0.798335533871;bHLH_family:-0.853969157008;RXRA_VDR{dimer}:-0.875146778547;ETS1,2:-0.903832894701;NANOG{mouse}:-0.906175283087;PPARG:-0.908548841655;ATF5_CREB3:-0.910294846571;HBP1_HMGB_SSRP1_UBTF:-0.920045315724;ATF6:-0.977585309886;NFE2L1:-1.01067764438;PAX3,7:-1.13824122954;TLX2:-1.1416498694;AR:-1.42860854997;HES1:-1.75643856365 | |top_motifs=NANOG:2.85379555922;PAX1,9:2.69123322933;SOX2:2.42607685551;T:2.21164932884;RBPJ:1.98299030759;NKX2-1,4:1.86608885439;GFI1:1.76234102644;ZIC1..3:1.75114056344;OCT4_SOX2{dimer}:1.63681701236;LHX3,4:1.5390403069;SOX{8,9,10}:1.48925696968;SOX17:1.45319473946;SP1:1.42537245533;VSX1,2:1.37526683105;NFY{A,B,C}:1.32036375753;GTF2A1,2:1.28414176308;PBX1:1.26928381328;FOXM1:1.24820076219;PATZ1:1.24041229649;ALX1:1.22951991181;TFDP1:1.22337065542;PAX5:1.22044082635;MZF1:1.19984268064;POU5F1:1.19766270917;MAZ:1.09659522;EBF1:1.08160720978;ZFP161:1.0739074322;PRRX1,2:1.0623779868;NKX2-3_NKX2-5:1.05683105506;HOX{A6,A7,B6,B7}:1.04640027335;MTE{core}:1.03040005565;LEF1_TCF7_TCF7L1,2:1.02841346592;ONECUT1,2:1.0261508476;HOX{A4,D4}:0.994024298258;GFI1B:0.979369352607;RREB1:0.97103180807;RORA:0.958334006181;ADNP_IRX_SIX_ZHX:0.929783943466;NHLH1,2:0.914019350568;STAT1,3:0.909053422209;CDX1,2,4:0.896447973127;NKX6-1,2:0.890677141452;GTF2I:0.880013770336;RFX1:0.853306208;CUX2:0.785246550716;LMO2:0.745366901872;TLX1..3_NFIC{dimer}:0.73780963632;DBP:0.698854574735;CRX:0.692874417409;XCPE1{core}:0.690552124828;RFX2..5_RFXANK_RFXAP:0.606704315497;ZBTB6:0.603073147472;POU1F1:0.594108780458;EVI1:0.58623985621;EGR1..3:0.584880484443;HIC1:0.577309865676;NRF1:0.556785093254;ZNF384:0.553085044443;CDC5L:0.550053154031;ZNF143:0.472502825056;JUN:0.47224625028;TFAP2B:0.453634069304;EP300:0.431632516153;TFAP4:0.413514763997;AHR_ARNT_ARNT2:0.413482980231;MED-1{core}:0.385077789771;MYFfamily:0.382849228825;PAX6:0.38075512186;E2F1..5:0.373049101504;PRDM1:0.367953144976;REST:0.333191363542;HAND1,2:0.292806348401;MYOD1:0.270790988869;GATA4:0.264744645327;SREBF1,2:0.250710355423;TGIF1:0.240871052092;NR3C1:0.234682531581;HNF4A_NR2F1,2:0.206299141057;KLF4:0.201459402801;SMAD1..7,9:0.169278822457;TEAD1:0.168130524084;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.164790030922;PAX8:0.152606746662;NFE2:0.135315180787;NKX3-1:0.121510390276;PAX4:0.108433879197;TBP:0.104550260824;HOX{A5,B5}:0.103289393816;BPTF:0.0944549284775;TFCP2:0.0919179626891;YY1:0.0672646057492;ESRRA:0.0634652297419;FOXP1:0.0567675590263;ZEB1:0.0509786746587;FOXP3:0.040913209617;TAL1_TCF{3,4,12}:0.0277766467251;FOSL2:0.0197647015863;POU3F1..4:0.0031443104297;SOX5:-0.0207010013873;TFAP2{A,C}:-0.0254888846564;RXR{A,B,G}:-0.0294278841389;NFATC1..3:-0.0308515536536;HNF1A:-0.0408607381042;MYBL2:-0.0624116675226;BREu{core}:-0.0695820969786;ELK1,4_GABP{A,B1}:-0.07898932633;NR1H4:-0.0917697439702;HSF1,2:-0.0990700812571;GCM1,2:-0.105768047877;IKZF1:-0.114541942508;HMX1:-0.11498679717;SRF:-0.132490750007;ATF2:-0.134520261736;RUNX1..3:-0.166750020354;TP53:-0.167223105345;MYB:-0.168071710301;MEF2{A,B,C,D}:-0.181177182426;HIF1A:-0.198802928052;FOXQ1:-0.212024996961;FOX{I1,J2}:-0.212309327209;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.216127014572;POU2F1..3:-0.222966982376;FOS_FOS{B,L1}_JUN{B,D}:-0.22354404941;BACH2:-0.230905559238;POU6F1:-0.238753864561;SNAI1..3:-0.24614171694;NFIL3:-0.250360427406;ZNF148:-0.250938639974;IKZF2:-0.251735582486;NKX3-2:-0.258432454985;FOXL1:-0.262274733208;ZNF423:-0.262329877031;EN1,2:-0.262861054983;MTF1:-0.302431658961;ZBTB16:-0.319807012335;NR6A1:-0.322071996613;NFKB1_REL_RELA:-0.333113671878;GZF1:-0.336572948695;PDX1:-0.339269870059;UFEwm:-0.342430332332;NR5A1,2:-0.35136356496;NFE2L2:-0.355683476763;STAT5{A,B}:-0.370734622365;NFIX:-0.38087832894;STAT2,4,6:-0.390788722458;FOXN1:-0.397804877038;DMAP1_NCOR{1,2}_SMARC:-0.429914459402;TBX4,5:-0.457050472849;FOXA2:-0.459968967516;PITX1..3:-0.470542258948;IRF1,2:-0.475110331371;GATA6:-0.475773124121;CREB1:-0.506621923487;ATF4:-0.519407427714;IRF7:-0.528538703594;FOXD3:-0.533346525993;GLI1..3:-0.534776490717;TEF:-0.558447421201;XBP1:-0.559236923142;TOPORS:-0.56421218307;ALX4:-0.568243427151;MAFB:-0.576249731904;PAX2:-0.577431119093;CEBPA,B_DDIT3:-0.592951009306;FOX{D1,D2}:-0.606184688103;ARID5B:-0.611354322632;FOXO1,3,4:-0.627206466934;NKX2-2,8:-0.646413024531;SPIB:-0.655653863385;HMGA1,2:-0.666918096143;SPI1:-0.702139523604;AIRE:-0.730718873265;ZNF238:-0.758785528039;HLF:-0.763213233193;ELF1,2,4:-0.767558991038;ESR1:-0.781434172162;FOX{F1,F2,J1}:-0.786605517644;SPZ1:-0.795264397187;HOXA9_MEIS1:-0.798335533871;bHLH_family:-0.853969157008;RXRA_VDR{dimer}:-0.875146778547;ETS1,2:-0.903832894701;NANOG{mouse}:-0.906175283087;PPARG:-0.908548841655;ATF5_CREB3:-0.910294846571;HBP1_HMGB_SSRP1_UBTF:-0.920045315724;ATF6:-0.977585309886;NFE2L1:-1.01067764438;PAX3,7:-1.13824122954;TLX2:-1.1416498694;AR:-1.42860854997;HES1:-1.75643856365 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11609-120I7;search_select_hide=table117:FF:11609-120I7 | |||
}} | }} | ||
Latest revision as of 18:11, 4 June 2020
| Name: | Lens Epithelial Cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12568 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12568
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12568
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0252 |
| 10 | 10 | 0.0111 |
| 100 | 100 | 0.893 |
| 101 | 101 | 0.524 |
| 102 | 102 | 0.964 |
| 103 | 103 | 0.152 |
| 104 | 104 | 0.662 |
| 105 | 105 | 0.47 |
| 106 | 106 | 0.0365 |
| 107 | 107 | 0.978 |
| 108 | 108 | 0.337 |
| 109 | 109 | 0.0307 |
| 11 | 11 | 0.0296 |
| 110 | 110 | 0.249 |
| 111 | 111 | 0.0207 |
| 112 | 112 | 0.0523 |
| 113 | 113 | 0.715 |
| 114 | 114 | 0.0102 |
| 115 | 115 | 0.0845 |
| 116 | 116 | 0.577 |
| 117 | 117 | 0.0152 |
| 118 | 118 | 0.178 |
| 119 | 119 | 0.242 |
| 12 | 12 | 0.67 |
| 120 | 120 | 0.292 |
| 121 | 121 | 0.711 |
| 122 | 122 | 0.739 |
| 123 | 123 | 0.0359 |
| 124 | 124 | 0.694 |
| 125 | 125 | 0.964 |
| 126 | 126 | 0.324 |
| 127 | 127 | 0.616 |
| 128 | 128 | 0.293 |
| 129 | 129 | 0.261 |
| 13 | 13 | 0.161 |
| 130 | 130 | 0.0681 |
| 131 | 131 | 0.478 |
| 132 | 132 | 0.938 |
| 133 | 133 | 0.863 |
| 134 | 134 | 0.808 |
| 135 | 135 | 0.401 |
| 136 | 136 | 0.571 |
| 137 | 137 | 0.0843 |
| 138 | 138 | 0.235 |
| 139 | 139 | 0.0025 |
| 14 | 14 | 0.84 |
| 140 | 140 | 0.442 |
| 141 | 141 | 0.216 |
| 142 | 142 | 0.0988 |
| 143 | 143 | 0.0321 |
| 144 | 144 | 0.731 |
| 145 | 145 | 0.788 |
| 146 | 146 | 0.876 |
| 147 | 147 | 0.864 |
| 148 | 148 | 0.00687 |
| 149 | 149 | 0.111 |
| 15 | 15 | 0.0719 |
| 150 | 150 | 0.392 |
| 151 | 151 | 0.311 |
| 152 | 152 | 0.12 |
| 153 | 153 | 0.419 |
| 154 | 154 | 0.604 |
| 155 | 155 | 0.0253 |
| 156 | 156 | 0.25 |
| 157 | 157 | 0.622 |
| 158 | 158 | 0.334 |
| 159 | 159 | 0.446 |
| 16 | 16 | 0.0999 |
| 160 | 160 | 0.203 |
| 161 | 161 | 0.452 |
| 162 | 162 | 0.232 |
| 163 | 163 | 0.867 |
| 164 | 164 | 0.00292 |
| 165 | 165 | 0.586 |
| 166 | 166 | 0.294 |
| 167 | 167 | 0.217 |
| 168 | 168 | 0.496 |
| 169 | 169 | 0.00389 |
| 17 | 17 | 0.0746 |
| 18 | 18 | 0.0764 |
| 19 | 19 | 0.307 |
| 2 | 2 | 0.696 |
| 20 | 20 | 0.664 |
| 21 | 21 | 0.293 |
| 22 | 22 | 0.362 |
| 23 | 23 | 0.21 |
| 24 | 24 | 0.59 |
| 25 | 25 | 0.348 |
| 26 | 26 | 0.0802 |
| 27 | 27 | 0.537 |
| 28 | 28 | 0.825 |
| 29 | 29 | 0.0283 |
| 3 | 3 | 0.0343 |
| 30 | 30 | 0.397 |
| 31 | 31 | 0.892 |
| 32 | 32 | 0.077 |
| 33 | 33 | 0.275 |
| 34 | 34 | 0.836 |
| 35 | 35 | 0.279 |
| 36 | 36 | 0.106 |
| 37 | 37 | 0.0729 |
| 38 | 38 | 0.163 |
| 39 | 39 | 0.744 |
| 4 | 4 | 0.755 |
| 40 | 40 | 0.49 |
| 41 | 41 | 0.293 |
| 42 | 42 | 0.232 |
| 43 | 43 | 0.135 |
| 44 | 44 | 0.151 |
| 45 | 45 | 0.936 |
| 46 | 46 | 0.0641 |
| 47 | 47 | 0.051 |
| 48 | 48 | 0.104 |
| 49 | 49 | 0.106 |
| 5 | 5 | 0.193 |
| 50 | 50 | 0.889 |
| 51 | 51 | 0.471 |
| 52 | 52 | 0.751 |
| 53 | 53 | 0.606 |
| 54 | 54 | 0.393 |
| 55 | 55 | 0.0741 |
| 56 | 56 | 0.616 |
| 57 | 57 | 0.366 |
| 58 | 58 | 0.0992 |
| 59 | 59 | 0.0978 |
| 6 | 6 | 0.51 |
| 60 | 60 | 0.0724 |
| 61 | 61 | 0.119 |
| 62 | 62 | 0.0445 |
| 63 | 63 | 0.162 |
| 64 | 64 | 0.287 |
| 65 | 65 | 0.107 |
| 66 | 66 | 0.714 |
| 67 | 67 | 0.682 |
| 68 | 68 | 0.463 |
| 69 | 69 | 0.37 |
| 7 | 7 | 0.243 |
| 70 | 70 | 0.00826 |
| 71 | 71 | 0.0142 |
| 72 | 72 | 0.398 |
| 73 | 73 | 0.0402 |
| 74 | 74 | 0.204 |
| 75 | 75 | 0.00993 |
| 76 | 76 | 0.142 |
| 77 | 77 | 0.234 |
| 78 | 78 | 0.149 |
| 79 | 79 | 0.159 |
| 8 | 8 | 0.147 |
| 80 | 80 | 0.7 |
| 81 | 81 | 0.221 |
| 82 | 82 | 0.0512 |
| 83 | 83 | 0.636 |
| 84 | 84 | 0.627 |
| 85 | 85 | 0.0929 |
| 86 | 86 | 0.0712 |
| 87 | 87 | 0.128 |
| 88 | 88 | 0.765 |
| 89 | 89 | 0.347 |
| 9 | 9 | 0.455 |
| 90 | 90 | 0.486 |
| 91 | 91 | 0.602 |
| 92 | 92 | 0.12 |
| 93 | 93 | 0.0541 |
| 94 | 94 | 0.0624 |
| 95 | 95 | 0.0259 |
| 96 | 96 | 0.541 |
| 97 | 97 | 0.717 |
| 98 | 98 | 0.229 |
| 99 | 99 | 0.871 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12568
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000085 (human lens epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
