FFCP PHASE1:Hg19::chr10:73848333..73848352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_uc010qjs.1_5end | |association_with_transcript=19bp_to_uc010qjs.1_5end | ||
|cluster_id=chr10:73848333..73848352,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_3_at_SPOCK2_5end | |description=CAGE_peak_3_at_SPOCK2_5end | ||
|id=chr10:73848333..73848352,- | |id=chr10:73848333..73848352,- | ||
|ontology_enrichment_celltype=CL:0000791!1.42e-15!18;CL:0000789!1.42e-15!18;CL:0002420!1.42e-15!18;CL:0002419!1.42e-15!18;CL:0000790!1.42e-15!18;CL:0000738!4.97e-15!140;CL:0000542!8.98e-14!53;CL:0000051!8.98e-14!53;CL:0000838!2.03e-13!52;CL:0002087!4.10e-12!119;CL:0000084!1.06e-11!25;CL:0000827!1.06e-11!25;CL:0000625!3.92e-10!11;CL:0002031!3.53e-09!124;CL:0000037!3.58e-08!172;CL:0000566!3.58e-08!172;CL:0000988!1.60e-07!182 | |ontology_enrichment_celltype=CL:0000791!1.42e-15!18;CL:0000789!1.42e-15!18;CL:0002420!1.42e-15!18;CL:0002419!1.42e-15!18;CL:0000790!1.42e-15!18;CL:0000738!4.97e-15!140;CL:0000542!8.98e-14!53;CL:0000051!8.98e-14!53;CL:0000838!2.03e-13!52;CL:0002087!4.10e-12!119;CL:0000084!1.06e-11!25;CL:0000827!1.06e-11!25;CL:0000625!3.92e-10!11;CL:0002031!3.53e-09!124;CL:0000037!3.58e-08!172;CL:0000566!3.58e-08!172;CL:0000988!1.60e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.69e-19;18!CL:0000789;3.69e-19;18!CL:0002419;3.69e-19;18!CL:0000084;3.72e-13;25!CL:0000625;2.44e-12;11!CL:0000542;2.97e-09;53!CL:0000624;8.30e-08;6!CL:0000236;3.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.66e-19,18;CL:0000789,3.66e-19,18;CL:0002420,3.66e-19,18;CL:0002419,3.66e-19,18;CL:0000790,3.66e-19,18;CL:0000542,1.11e-14,53;CL:0000051,1.11e-14,53;CL:0000838,3.00e-14,52;CL:0000084,3.70e-13,25;CL:0000827,3.70e-13,25;CL:0000625,2.51e-12,11;CL:0000738,5.40e-11,136;CL:0002087,3.84e-09,115;CL:0000624,8.19e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.69e-19;18!CL:0000051;2.97e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.87e-47!115;UBERON:0001049!1.21e-29!57;UBERON:0005068!1.21e-29!57;UBERON:0006241!1.21e-29!57;UBERON:0007135!1.21e-29!57;UBERON:0002616!1.34e-24!59;UBERON:0001017!4.92e-24!82;UBERON:0003080!1.77e-23!42;UBERON:0002780!3.32e-23!41;UBERON:0001890!3.32e-23!41;UBERON:0006240!3.32e-23!41;UBERON:0005743!1.36e-22!86;UBERON:0002020!1.50e-20!34;UBERON:0003528!1.50e-20!34;UBERON:0000955!1.50e-20!69;UBERON:0006238!1.50e-20!69;UBERON:0001893!2.23e-20!34;UBERON:0000073!5.12e-20!94;UBERON:0001016!5.12e-20!94;UBERON:0002791!8.93e-20!33;UBERON:0001869!9.62e-20!32;UBERON:0003075!8.94e-18!86;UBERON:0007284!8.94e-18!86;UBERON:0002346!6.47e-17!90;UBERON:0000956!3.38e-15!25;UBERON:0000203!3.38e-15!25;UBERON:0002619!6.94e-15!22;UBERON:0001950!8.21e-14!20;UBERON:0003056!3.40e-13!61;UBERON:0000153!2.23e-09!129;UBERON:0007811!2.23e-09!129;UBERON:0000033!1.67e-07!123;UBERON:0003076!2.27e-07!15;UBERON:0003057!2.27e-07!15;UBERON:0002420!5.30e-07!9;UBERON:0007245!5.30e-07!9;UBERON:0010009!5.30e-07!9;UBERON:0010011!5.30e-07!9;UBERON:0000454!5.30e-07!9;UBERON:0002308!7.97e-07!9;UBERON:0000125!7.97e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!6.87e-47!115;UBERON:0001049!1.21e-29!57;UBERON:0005068!1.21e-29!57;UBERON:0006241!1.21e-29!57;UBERON:0007135!1.21e-29!57;UBERON:0002616!1.34e-24!59;UBERON:0001017!4.92e-24!82;UBERON:0003080!1.77e-23!42;UBERON:0002780!3.32e-23!41;UBERON:0001890!3.32e-23!41;UBERON:0006240!3.32e-23!41;UBERON:0005743!1.36e-22!86;UBERON:0002020!1.50e-20!34;UBERON:0003528!1.50e-20!34;UBERON:0000955!1.50e-20!69;UBERON:0006238!1.50e-20!69;UBERON:0001893!2.23e-20!34;UBERON:0000073!5.12e-20!94;UBERON:0001016!5.12e-20!94;UBERON:0002791!8.93e-20!33;UBERON:0001869!9.62e-20!32;UBERON:0003075!8.94e-18!86;UBERON:0007284!8.94e-18!86;UBERON:0002346!6.47e-17!90;UBERON:0000956!3.38e-15!25;UBERON:0000203!3.38e-15!25;UBERON:0002619!6.94e-15!22;UBERON:0001950!8.21e-14!20;UBERON:0003056!3.40e-13!61;UBERON:0000153!2.23e-09!129;UBERON:0007811!2.23e-09!129;UBERON:0000033!1.67e-07!123;UBERON:0003076!2.27e-07!15;UBERON:0003057!2.27e-07!15;UBERON:0002420!5.30e-07!9;UBERON:0007245!5.30e-07!9;UBERON:0010009!5.30e-07!9;UBERON:0010011!5.30e-07!9;UBERON:0000454!5.30e-07!9;UBERON:0002308!7.97e-07!9;UBERON:0000125!7.97e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.46e-20;32!UBERON:0003528;8.54e-20;34!UBERON:0002020;8.54e-20;34!UBERON:0002791;8.55e-20;32!UBERON:0001893;9.74e-20;34!UBERON:0002780;1.38e-18;41!UBERON:0001890;1.38e-18;41!UBERON:0002619;2.71e-18;22!UBERON:0000073;1.37e-17;53!UBERON:0002616;1.37e-17;53!UBERON:0001950;5.99e-17;20!UBERON:0000956;1.77e-16;25!UBERON:0000203;1.77e-16;25!UBERON:0007023;1.87e-12;114!UBERON:0001017;2.51e-11;75!UBERON:0000955;3.47e-11;68!UBERON:0001016;1.99e-09;83!UBERON:0002420;2.05e-08;9!UBERON:0007245;2.05e-08;9!UBERON:0010009;2.05e-08;9!UBERON:0010011;2.05e-08;9!UBERON:0000454;2.05e-08;9!UBERON:0000125;3.44e-08;9!UBERON:0002308;3.44e-08;9!UBERON:0000178;4.88e-08;15!UBERON:0000179;4.88e-08;15!UBERON:0000463;4.88e-08;15!UBERON:0004732;5.42e-07;13!UBERON:0009663;8.46e-07;7 | |||
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| ||
|short_description=p3@SPOCK2 | |short_description=p3@SPOCK2 | ||
}} | }} |
Latest revision as of 05:02, 19 September 2015
Short description: | p3@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 19bp_to_uc010qjs.1_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.66e-19 | 18 |
alpha-beta T cell | 3.66e-19 | 18 |
immature T cell | 3.66e-19 | 18 |
mature T cell | 3.66e-19 | 18 |
immature alpha-beta T cell | 3.66e-19 | 18 |
lymphocyte | 1.11e-14 | 53 |
common lymphoid progenitor | 1.11e-14 | 53 |
lymphoid lineage restricted progenitor cell | 3.00e-14 | 52 |
T cell | 3.70e-13 | 25 |
pro-T cell | 3.70e-13 | 25 |
CD8-positive, alpha-beta T cell | 2.51e-12 | 11 |
leukocyte | 5.40e-11 | 136 |
nongranular leukocyte | 3.84e-09 | 115 |
CD4-positive, alpha-beta T cell | 8.19e-08 | 6 |