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FFCP PHASE1:Mm9::chr6:39675486..39675503,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109880
|EntrezGene=109880
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P28028
|UniProt=P28028
|association_with_transcript=-24bp_to_ENSMUST00000002487,NM_139294,uc009bme.1_5end
|association_with_transcript=-24bp_to_ENSMUST00000002487,NM_139294,uc009bme.1_5end
|cluster_id=chr6:39675486..39675503,-
|description=CAGE_peak_3_at_Braf_5end
|description=CAGE_peak_3_at_Braf_5end
|id=chr6:39675486..39675503,-
|id=chr6:39675486..39675503,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.99e-11!52;UBERON:0005068!3.99e-11!52;UBERON:0006241!3.99e-11!52;UBERON:0007135!3.99e-11!52;UBERON:0002020!5.77e-11!34;UBERON:0000955!1.15e-09!50;UBERON:0006238!1.15e-09!50;UBERON:0002791!2.39e-09!29;UBERON:0003528!2.39e-09!29;UBERON:0001893!2.39e-09!29;UBERON:0002616!2.93e-09!49;UBERON:0000033!8.75e-09!63;UBERON:0004121!9.08e-09!102;UBERON:0000924!9.08e-09!102;UBERON:0006601!9.08e-09!102;UBERON:0002346!2.15e-08!71;UBERON:0003075!2.15e-08!71;UBERON:0007284!2.15e-08!71;UBERON:0001017!3.12e-08!73;UBERON:0005743!3.12e-08!73;UBERON:0003080!8.07e-08!40;UBERON:0000073!8.62e-08!75;UBERON:0001016!8.62e-08!75;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10;UBERON:0002780!1.69e-07!39;UBERON:0001890!1.69e-07!39;UBERON:0006240!1.69e-07!39;UBERON:0000956!2.33e-07!21;UBERON:0001869!2.33e-07!21;UBERON:0000203!2.33e-07!21;UBERON:0004111!6.45e-07!122;UBERON:0002619!6.61e-07!17
|ontology_enrichment_uberon=UBERON:0001049!3.99e-11!52;UBERON:0005068!3.99e-11!52;UBERON:0006241!3.99e-11!52;UBERON:0007135!3.99e-11!52;UBERON:0002020!5.77e-11!34;UBERON:0000955!1.15e-09!50;UBERON:0006238!1.15e-09!50;UBERON:0002791!2.39e-09!29;UBERON:0003528!2.39e-09!29;UBERON:0001893!2.39e-09!29;UBERON:0002616!2.93e-09!49;UBERON:0000033!8.75e-09!63;UBERON:0004121!9.08e-09!102;UBERON:0000924!9.08e-09!102;UBERON:0006601!9.08e-09!102;UBERON:0002346!2.15e-08!71;UBERON:0003075!2.15e-08!71;UBERON:0007284!2.15e-08!71;UBERON:0001017!3.12e-08!73;UBERON:0005743!3.12e-08!73;UBERON:0003080!8.07e-08!40;UBERON:0000073!8.62e-08!75;UBERON:0001016!8.62e-08!75;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10;UBERON:0002780!1.69e-07!39;UBERON:0001890!1.69e-07!39;UBERON:0006240!1.69e-07!39;UBERON:0000956!2.33e-07!21;UBERON:0001869!2.33e-07!21;UBERON:0000203!2.33e-07!21;UBERON:0004111!6.45e-07!122;UBERON:0002619!6.61e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.10e-15,54;UBERON:0001049,1.60e-15,52;UBERON:0005068,1.60e-15,52;UBERON:0006241,1.60e-15,52;UBERON:0007135,1.60e-15,52;UBERON:0002020,1.95e-15,34;UBERON:0000955,3.74e-13,47;UBERON:0006238,3.74e-13,47;UBERON:0003528,3.85e-13,29;UBERON:0002791,3.85e-13,29;UBERON:0001893,3.85e-13,29;UBERON:0010371,7.08e-13,73;UBERON:0002616,1.43e-12,46;UBERON:0001017,1.69e-11,73;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0003080,3.58e-11,40;UBERON:0001016,8.59e-11,75;UBERON:0002780,1.04e-10,39;UBERON:0001890,1.04e-10,39;UBERON:0006240,1.04e-10,39;UBERON:0004121,3.09e-10,95;UBERON:0000924,3.09e-10,95;UBERON:0006601,3.09e-10,95;UBERON:0002021,3.97e-10,10;UBERON:0000411,3.97e-10,10;UBERON:0001950,3.97e-10,10;UBERON:0000956,1.17e-09,21;UBERON:0001869,1.17e-09,21;UBERON:0000203,1.17e-09,21;UBERON:0002619,6.90e-09,17;UBERON:0003056,1.54e-08,49;UBERON:0004111,3.81e-08,122;UBERON:0010314,8.43e-08,92;UBERON:0000025,7.81e-07,114
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|phase1_expression=1.12104192973356,0.697950815278722,0.909998478779072,0.60492842261366,0,0.16787927191189,0.934450562382103,0.258246646883153,0.563154888606667,0,0.513653904676515,0.8774937489487,0,0.34968160967599,0.333109761815663,0.202475267389826,0,0.788655413395594,0.548457734422955,0.84877930359606,2.21112554392781,0.695036658406197,0,0,0.45881856213434,1.14846392823004,0.430761996159075,1.07735616342945,0.380046838912748,0.504060259519861,1.10865255327652,0.635030673459631,0.61506478758457,0,0.866554859253824,0.498703936075477,0.204169356262369,0.837063261473815,3.906676722619,1.57057123192139,1.76469446409304,1.36609096991689,1.45653105909346,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.699932108126813,0,0.503347818173209,1.45072428402269,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0.899899717281399,0,2.1314403448383,0.299600110518405,0.384218305321555,1.14058573539325,0.405017814995072,1.68259969081106,1.14260393761521,1.10434270475807,1.22490799214954,1.15014565221884,0.919218786610021,0,2.55374676170375,3.37934373163736,1.31886287730194,1.55528994124096,1.56274011167028,2.79182999001381,0,1.83357897332172,1.47314292736834,1.70846016958924,3.16879057903011,0.681535739998656,0.302286240427142,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0,0.280888840263504,0.511290967734173,0.519572009205738,0,2.11265129665021,0,7.64415719119937,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,0.890652834388949,1.04091196059682,0.304465478312141,0.230615497256059,1.05505848386836,1.52865319276416,0.628332956648377,1.48316980640624,0.578397427679647,0,0.808834249737046,0.441683036920787,0.484875253135222,0,3.51336956413857,3.14170060220183,0,1.1981512450592,0,0.889491589511453,1.49790639404823,3.20250421973039,2.89005009859588,3.99795936442236,5.37002460393694,2.28566849015516,3.40706652442291,1.01839363850316,0.995255764880744,4.0435641349388,1.05220927943237,0,0.459804208866946,0.900310649026746,0.452114453507145,0.95251098811859,0.640568601424249,0.655912071918102,1.29351685369508,0.646703978798527,0.189106080167819,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0,0.199034266818493,0.702213187313235,2.05878325691772,1.70498099637356,1.03562886267751,0,0.720248245844059,0.473489471170421,0.787056926989615,0.308534225774757,0.697601834251224,0.536546802799238,1.63471479314037,0.493679549740441,0.492502392237286,0.648550476366846,0.584799949701329,0.878200461164203,1.74468344388483,3.36463917702604,2.6755199218614,0,0.528901133327089,0.639864751605702,0.232236671860439,0.77320476793256,1.81515172161008,0.889512175379481,0.380451252225118,0,0,1.00534083520108,1.39269530428806,1.55971269695296,0,1.08069024937347,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,1.16371492300575,0.911765658574141,1.3279672796094,1.03327103585722,0.784993639206874,0.740382983530803,0.296452627087149,1.50160595144485,1.37591296579242,0.674586337154561,1.42002084971952,0.964708639009667,0.50925170356284,0.863088412352432,0.324270453550071,0.549122826376163,5.75072826109418,0.372140947668503,0,0.252578877947112,0.717589654087649,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0,0.704070744865506,1.50755631697634,0.952174563544055,1.36593553500459,1.10344600874334,3.10050565508285,1.75400245523236,0.655453258862952,0.345369963731791,1.15719246865209,0,0,0.983528546038072,0.827810238914197,1.44495530989013,2.46144541843627,0.983609672260053,0.504941854408746,0.315508219416257,0,0.861693590931196,0,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,1.92792789853084,0.425820255624806,0.712262414669021,0.977321756121456,0.659880491890142,1.32745138339963,0.485561272309963,0.604647113929502,0.943025398779491,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,2.38307724027652,0.540183282093931,0.517434735131018,0.857348140126369,0.532020700926821,0.356737635204141,0.164549020602121,0,0.469343416127421,0.63549621259146,1.32317038832977,2.30840754118072,0.645857706783622,1.26657142349127,1.55184047204077,1.96969079694074,0.291480836629851,2.78137953015765,0.341741761595705,0.412773735926445,1.29636169158798,0.188368457004691,0.956859594047176,0.228778173206523,2.37969801991397,1.25956307091292,1.10559979043539,0,0.316335993581135,0.813277868507395,0.86404272657441,0.836353184057875,1.31017538247707,0.674321731924103,1.48776220305605,0.785267825952089,1.03691978633434,0.621339313086926,4.50954350947352,1.04661582230785,0.827292452285488,0.777804753376191,0.774958940866387,0,1.05621514781179,1.43224823328345,1.04859344425711,1.93267296660805,4.60848010012585,0,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.596044064343795,0.240390899039938,0.147689527174577,0.302899349844443,0.685861259894999,1.00826185136841,0.584747284438515,0.673482891482306,0.584384510907845,0.680191150845634,0.221985953374065,0.179427713218951,0.335769232728157,1.15913756419314,0.563047426353546,0.549454872801795,1.2862102744744,1.50471631210609,4.51801474093653,4.60325236507177,4.01026859407578,3.09335728218638,2.05524755931193,5.2877572817279,4.72515750162264,2.70192721934532,5.43770890781046,6.73088405277366,0.726511433089237,0.399024873401031,1.02440163452481,0.243106717068294,0.419226325255965,0,0,0.618105171716683,0.962757628775446,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,1.21647789569252,1.09127391015665,1.90517476513229,0.927074607558844,1.15745532278223,1.23625770240992,1.17759136107518,0,0.532427418478012,0.238436189947321,0.872078499793971,1.12931256498397,0.930760686808441,0.548783918618318,0.526139422875686,0.679020569229309,0,1.18635018124174,1.0835493061312,0,0.464810523557898,0.385813221962283,0.999242311751784,1.16965804222704,0.859484216193193,1.3390183244819,0.441182838239031,0.463735671240843
|short_description=p3@Braf
|short_description=p3@Braf
}}
}}

Latest revision as of 04:09, 27 September 2015

Short description:p3@Braf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Braf_5end
Coexpression cluster:NA
Association with transcript: -24bp_to_ENSMUST00000002487, NM_139294, uc009bme.1_5end
EntrezGene:Braf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Braf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.10e-1554
neural tube1.60e-1552
neural rod1.60e-1552
future spinal cord1.60e-1552
neural keel1.60e-1552
gray matter1.95e-1534
brain3.74e-1347
future brain3.74e-1347
brain grey matter3.85e-1329
regional part of telencephalon3.85e-1329
telencephalon3.85e-1329
ecto-epithelium7.08e-1373
regional part of brain1.43e-1246
central nervous system1.69e-1173
neurectoderm2.50e-1164
neural plate2.50e-1164
presumptive neural plate2.50e-1164
anterior neural tube3.58e-1140
nervous system8.59e-1175
regional part of forebrain1.04e-1039
forebrain1.04e-1039
future forebrain1.04e-1039
ectoderm-derived structure3.09e-1095
ectoderm3.09e-1095
presumptive ectoderm3.09e-1095
occipital lobe3.97e-1010
visual cortex3.97e-1010
neocortex3.97e-1010
cerebral cortex1.17e-0921
cerebral hemisphere1.17e-0921
pallium1.17e-0921
regional part of cerebral cortex6.90e-0917
pre-chordal neural plate1.54e-0849
anatomical conduit3.81e-08122
structure with developmental contribution from neural crest8.43e-0892
tube7.81e-07114
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