FFCP PHASE1:Hg19::chr11:111944716..111944774,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120379 | |EntrezGene=120379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25210 | |HGNC=25210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000532211,uc001pmq.3_5end | |association_with_transcript=-12bp_to_ENST00000532211,uc001pmq.3_5end | ||
|cluster_id=chr11:111944716..111944774,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_PIH1D2_5end | |description=CAGE_peak_1_at_PIH1D2_5end | ||
|id=chr11:111944716..111944774,- | |id=chr11:111944716..111944774,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.84e-12!143;DOID:305!1.17e-11!106;DOID:14566!2.09e-11!239;DOID:162!5.71e-11!235 | |ontology_enrichment_disease=DOID:0050687!5.84e-12!143;DOID:305!1.17e-11!106;DOID:14566!2.09e-11!239;DOID:162!5.71e-11!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.22e-09,106;DOID:0050687,6.21e-09,143;DOID:14566,9.28e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.49e-15!173;UBERON:0006601!1.49e-15!173;UBERON:0004121!6.75e-15!169;UBERON:0000073!6.41e-13!94;UBERON:0001016!6.41e-13!94;UBERON:0000033!6.60e-12!123;UBERON:0000153!6.68e-12!129;UBERON:0007811!6.68e-12!129;UBERON:0005743!2.10e-11!86;UBERON:0001017!6.41e-11!82;UBERON:0000475!1.23e-10!365;UBERON:0001049!3.11e-10!57;UBERON:0005068!3.11e-10!57;UBERON:0006241!3.11e-10!57;UBERON:0007135!3.11e-10!57;UBERON:0000955!4.98e-10!69;UBERON:0006238!4.98e-10!69;UBERON:0000481!1.23e-09!347;UBERON:0003080!2.06e-09!42;UBERON:0002346!2.33e-09!90;UBERON:0002780!2.53e-09!41;UBERON:0001890!2.53e-09!41;UBERON:0006240!2.53e-09!41;UBERON:0002616!2.85e-09!59;UBERON:0003075!8.89e-09!86;UBERON:0007284!8.89e-09!86;UBERON:0003056!3.25e-08!61;UBERON:0000477!9.01e-08!286;UBERON:0000062!1.59e-07!511;UBERON:0002020!4.39e-07!34;UBERON:0003528!4.39e-07!34;UBERON:0001893!8.09e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.08e-08;41!UBERON:0001890;6.08e-08;41!UBERON:0000073;2.02e-07;53!UBERON:0002616;2.02e-07;53!UBERON:0003528;9.83e-07;34!UBERON:0002020;9.83e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.62e-15,171;UBERON:0000924,5.62e-15,171;UBERON:0006601,5.62e-15,171;UBERON:0001016,1.36e-13,89;UBERON:0001017,3.55e-12,81;UBERON:0001049,5.79e-12,56;UBERON:0005068,5.79e-12,56;UBERON:0006241,5.79e-12,56;UBERON:0007135,5.79e-12,56;UBERON:0011216,6.76e-12,223;UBERON:0000073,2.30e-11,53;UBERON:0002616,2.30e-11,53;UBERON:0000955,4.72e-11,68;UBERON:0006238,4.72e-11,68;UBERON:0002780,4.94e-11,41;UBERON:0001890,4.94e-11,41;UBERON:0003080,4.94e-11,41;UBERON:0006240,4.94e-11,41;UBERON:0002346,1.25e-10,86;UBERON:0010371,2.30e-10,104;UBERON:0003075,4.09e-10,82;UBERON:0007284,4.09e-10,82;UBERON:0003056,5.53e-10,61;UBERON:0010314,1.24e-09,132;UBERON:0003528,2.31e-08,34;UBERON:0002020,2.31e-08,34;UBERON:0001893,4.82e-08,34;UBERON:0001869,1.38e-07,32;UBERON:0002791,2.76e-07,32;UBERON:0007023,3.46e-07,114 | |||
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| ||
|short_description=p1@PIH1D2 | |short_description=p1@PIH1D2 | ||
}} | }} |
Latest revision as of 04:50, 25 September 2015
Short description: | p1@PIH1D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIH1D2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -12bp_to_ENST00000532211, uc001pmq.3_5end |
EntrezGene: | PIH1D2 |
HGNC: | 25210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.62e-15 | 171 |
ectoderm | 5.62e-15 | 171 |
presumptive ectoderm | 5.62e-15 | 171 |
nervous system | 1.36e-13 | 89 |
central nervous system | 3.55e-12 | 81 |
neural tube | 5.79e-12 | 56 |
neural rod | 5.79e-12 | 56 |
future spinal cord | 5.79e-12 | 56 |
neural keel | 5.79e-12 | 56 |
organ system subdivision | 6.76e-12 | 223 |
regional part of nervous system | 2.30e-11 | 53 |
regional part of brain | 2.30e-11 | 53 |
brain | 4.72e-11 | 68 |
future brain | 4.72e-11 | 68 |
regional part of forebrain | 4.94e-11 | 41 |
forebrain | 4.94e-11 | 41 |
anterior neural tube | 4.94e-11 | 41 |
future forebrain | 4.94e-11 | 41 |
neurectoderm | 1.25e-10 | 86 |
ecto-epithelium | 2.30e-10 | 104 |
neural plate | 4.09e-10 | 82 |
presumptive neural plate | 4.09e-10 | 82 |
pre-chordal neural plate | 5.53e-10 | 61 |
structure with developmental contribution from neural crest | 1.24e-09 | 132 |
brain grey matter | 2.31e-08 | 34 |
gray matter | 2.31e-08 | 34 |
telencephalon | 4.82e-08 | 34 |
cerebral hemisphere | 1.38e-07 | 32 |
regional part of telencephalon | 2.76e-07 | 32 |
adult organism | 3.46e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.22e-09 | 106 |
cell type cancer | 6.21e-09 | 143 |
disease of cellular proliferation | 9.28e-07 | 239 |