FFCP PHASE1:Hg19::chr15:74421477..74421496,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283731 | |EntrezGene=283731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000514871,NR_027073,uc002axc.2_5end | |association_with_transcript=122bp_to_ENST00000514871,NR_027073,uc002axc.2_5end | ||
|cluster_id=chr15:74421477..74421496,- | |||
|description=CAGE_peak_1_at_LOC283731_5end | |description=CAGE_peak_1_at_LOC283731_5end | ||
|id=chr15:74421477..74421496,- | |id=chr15:74421477..74421496,- | ||
|ontology_enrichment_celltype=CL:0000133!2.17e-07!59;CL:0000708!4.60e-07!3 | |ontology_enrichment_celltype=CL:0000133!2.17e-07!59;CL:0000708!4.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.61e-21;2!CL:0000242;1.61e-21;2!CL:0000540;9.85e-16;6!CL:0000404;9.85e-16;6!CL:0002319;4.53e-13;25!CL:0000306;8.52e-11;4!CL:0002222;8.52e-11;4!CL:0002224;8.52e-11;4!CL:0000312;3.60e-09;5!CL:0000240;8.80e-08;6!CL:0000311;8.80e-08;6!CL:0000079;8.80e-08;6!CL:0000237;8.80e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.53e-21,2;CL:0000540,8.70e-16,6;CL:0000031,8.70e-16,6;CL:0000404,8.70e-16,6;CL:0002319,4.49e-13,25;CL:0000047,5.51e-12,8;CL:0000306,6.99e-11,4;CL:0002222,6.99e-11,4;CL:0002224,6.99e-11,4;CL:0000133,1.30e-09,59;CL:0000312,3.53e-09,5;CL:0000240,8.66e-08,6;CL:0000311,8.66e-08,6;CL:0000079,8.66e-08,6;CL:0000237,8.66e-08,6;CL:0000036,8.66e-08,6;CL:0000357,8.66e-08,6;CL:0000114,8.66e-08,6;CL:0000221,9.44e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.29e-20;2!CL:0000031;9.85e-16;6!CL:0000357;8.80e-08;6!CL:0000114;8.80e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.70e-36!32;UBERON:0000073!1.36e-34!94;UBERON:0001016!1.36e-34!94;UBERON:0002780!1.81e-34!41;UBERON:0001890!1.81e-34!41;UBERON:0006240!1.81e-34!41;UBERON:0001893!5.71e-34!34;UBERON:0002020!1.00e-33!34;UBERON:0003528!1.00e-33!34;UBERON:0001017!1.06e-33!82;UBERON:0002616!1.49e-33!59;UBERON:0003080!1.82e-33!42;UBERON:0005743!2.03e-33!86;UBERON:0002791!3.28e-32!33;UBERON:0000955!1.04e-30!69;UBERON:0006238!1.04e-30!69;UBERON:0001049!1.64e-30!57;UBERON:0005068!1.64e-30!57;UBERON:0006241!1.64e-30!57;UBERON:0007135!1.64e-30!57;UBERON:0003056!1.94e-30!61;UBERON:0003075!4.39e-28!86;UBERON:0007284!4.39e-28!86;UBERON:0002346!6.33e-28!90;UBERON:0000956!1.33e-26!25;UBERON:0000203!1.33e-26!25;UBERON:0000924!2.46e-25!173;UBERON:0006601!2.46e-25!173;UBERON:0004121!4.13e-25!169;UBERON:0002619!1.20e-24!22;UBERON:0001950!4.52e-24!20;UBERON:0000033!2.01e-22!123;UBERON:0000153!5.79e-22!129;UBERON:0007811!5.79e-22!129;UBERON:0007023!2.09e-15!115;UBERON:0001871!7.33e-13!7;UBERON:0002420!4.21e-12!9;UBERON:0007245!4.21e-12!9;UBERON:0010009!4.21e-12!9;UBERON:0010011!4.21e-12!9;UBERON:0000454!4.21e-12!9;UBERON:0000369!4.90e-10!4;UBERON:0002435!4.90e-10!4;UBERON:0000204!4.90e-10!4;UBERON:0010082!4.90e-10!4;UBERON:0000200!1.28e-08!6;UBERON:0002308!1.49e-08!9;UBERON:0000125!1.49e-08!9;UBERON:0000064!2.55e-08!219;UBERON:0009663!3.13e-08!7;UBERON:0005383!4.64e-08!3;UBERON:0005382!4.64e-08!3;UBERON:0002021!6.02e-08!5;UBERON:0000349!6.58e-08!5;UBERON:0000119!3.40e-07!312;UBERON:0003210!4.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.29e-20;2!UBERON:0005383;4.42e-14;3!UBERON:0005382;4.42e-14;3!UBERON:0000369;8.52e-11;4!UBERON:0002435;8.52e-11;4!UBERON:0010077;8.52e-11;4!UBERON:0005389;8.52e-11;4!UBERON:0000484;8.52e-11;4!UBERON:0000965;8.52e-11;4!UBERON:0001803;8.52e-11;4!UBERON:0000204;8.52e-11;4!UBERON:0002021;6.31e-09;5!UBERON:0007625;1.27e-08;11!UBERON:0010371;1.08e-07;31!UBERON:0002791;1.16e-07;32!UBERON:0001869;1.16e-07;32!UBERON:0001801;7.05e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,8.62e-21,2;UBERON:0010122,8.62e-21,2;UBERON:0005383,3.39e-14,3;UBERON:0005382,3.39e-14,3;UBERON:0004121,2.47e-12,171;UBERON:0000924,2.47e-12,171;UBERON:0006601,2.47e-12,171;UBERON:0001016,1.42e-11,89;UBERON:0000369,6.99e-11,4;UBERON:0002435,6.99e-11,4;UBERON:0010077,6.99e-11,4;UBERON:0005389,6.99e-11,4;UBERON:0000484,6.99e-11,4;UBERON:0002546,6.99e-11,4;UBERON:0000965,6.99e-11,4;UBERON:0001803,6.99e-11,4;UBERON:0000204,6.99e-11,4;UBERON:0010082,6.99e-11,4;UBERON:0003073,6.99e-11,4;UBERON:0005426,6.99e-11,4;UBERON:0001017,1.20e-10,81;UBERON:0010371,7.95e-10,104;UBERON:0003056,2.77e-09,61;UBERON:0002021,6.44e-09,5;UBERON:0007625,1.29e-08,11;UBERON:0003075,1.87e-08,82;UBERON:0007284,1.87e-08,82;UBERON:0002346,5.20e-08,86;UBERON:0002791,1.87e-07,32;UBERON:0001869,1.87e-07,32;UBERON:0003528,5.09e-07,34;UBERON:0002020,5.09e-07,34;UBERON:0001893,5.09e-07,34;UBERON:0001801,7.13e-07,14 | |||
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| ||
|short_description=p1@LOC283731 | |short_description=p1@LOC283731 | ||
}} | }} |
Latest revision as of 00:18, 19 September 2015
Short description: | p1@LOC283731 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283731_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000514871, NR_027073, uc002axc.2_5end |
EntrezGene: | LOC283731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.53e-21 | 2 |
neuron | 8.70e-16 | 6 |
neuroblast | 8.70e-16 | 6 |
electrically signaling cell | 8.70e-16 | 6 |
neural cell | 4.49e-13 | 25 |
neuronal stem cell | 5.51e-12 | 8 |
crystallin accumulating cell | 6.99e-11 | 4 |
vertebrate lens cell | 6.99e-11 | 4 |
lens epithelial cell | 6.99e-11 | 4 |
neurectodermal cell | 1.30e-09 | 59 |
keratinocyte | 3.53e-09 | 5 |
stratified squamous epithelial cell | 8.66e-08 | 6 |
keratin accumulating cell | 8.66e-08 | 6 |
stratified epithelial cell | 8.66e-08 | 6 |
keratinizing barrier epithelial cell | 8.66e-08 | 6 |
epithelial fate stem cell | 8.66e-08 | 6 |
stratified epithelial stem cell | 8.66e-08 | 6 |
surface ectodermal cell | 8.66e-08 | 6 |
ectodermal cell | 9.44e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 8.62e-21 | 2 |
future caudate nucleus | 8.62e-21 | 2 |
caudate-putamen | 3.39e-14 | 3 |
dorsal striatum | 3.39e-14 | 3 |
ectoderm-derived structure | 2.47e-12 | 171 |
ectoderm | 2.47e-12 | 171 |
presumptive ectoderm | 2.47e-12 | 171 |
nervous system | 1.42e-11 | 89 |
corpus striatum | 6.99e-11 | 4 |
striatum | 6.99e-11 | 4 |
cuboidal epithelium | 6.99e-11 | 4 |
transparent eye structure | 6.99e-11 | 4 |
simple cuboidal epithelium | 6.99e-11 | 4 |
cranial placode | 6.99e-11 | 4 |
lens of camera-type eye | 6.99e-11 | 4 |
epithelium of lens | 6.99e-11 | 4 |
ventral part of telencephalon | 6.99e-11 | 4 |
future corpus striatum | 6.99e-11 | 4 |
lens placode | 6.99e-11 | 4 |
lens vesicle | 6.99e-11 | 4 |
central nervous system | 1.20e-10 | 81 |
ecto-epithelium | 7.95e-10 | 104 |
pre-chordal neural plate | 2.77e-09 | 61 |
occipital lobe | 6.44e-09 | 5 |
pigment epithelium of eye | 1.29e-08 | 11 |
neural plate | 1.87e-08 | 82 |
presumptive neural plate | 1.87e-08 | 82 |
neurectoderm | 5.20e-08 | 86 |
regional part of telencephalon | 1.87e-07 | 32 |
cerebral hemisphere | 1.87e-07 | 32 |
brain grey matter | 5.09e-07 | 34 |
gray matter | 5.09e-07 | 34 |
telencephalon | 5.09e-07 | 34 |
anterior segment of eyeball | 7.13e-07 | 14 |