FFCP PHASE1:Mm9::chr9:102257015..102257029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270190 | |EntrezGene=270190 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CBF3,Q8CA63,B1B1C1 | |UniProt=Q8CBF3,Q8CA63,B1B1C1 | ||
|association_with_transcript=0bp_to_ENSMUST00000035129,ENSMUST00000085169,ENSMUST00000149800,NM_001168296,NM_173447,uc009rfn.2,uc009rfo.2,uc012gzg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000035129,ENSMUST00000085169,ENSMUST00000149800,NM_001168296,NM_173447,uc009rfn.2,uc009rfo.2,uc012gzg.1_5end | ||
|cluster_id=chr9:102257015..102257029,- | |||
|description=CAGE_peak_2_at_Ephb1_5end | |description=CAGE_peak_2_at_Ephb1_5end | ||
|id=chr9:102257015..102257029,- | |id=chr9:102257015..102257029,- | ||
|ontology_enrichment_celltype=CL:0000117!1.74e-14!23;CL:0000337!1.74e-14!23;CL:0000540!1.33e-09!33;CL:0000047!1.33e-09!33;CL:0000031!1.33e-09!33;CL:0000404!1.33e-09!33;CL:0000221!6.46e-07!44;CL:0000133!6.46e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.74e-14!23;CL:0000337!1.74e-14!23;CL:0000540!1.33e-09!33;CL:0000047!1.33e-09!33;CL:0000031!1.33e-09!33;CL:0000404!1.33e-09!33;CL:0000221!6.46e-07!44;CL:0000133!6.46e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.27e-15,23;CL:0000337,3.27e-15,23;CL:0000540,1.51e-08,33;CL:0000047,1.51e-08,33;CL:0000031,1.51e-08,33;CL:0000404,1.51e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.64e-22!52;UBERON:0005068!3.64e-22!52;UBERON:0006241!3.64e-22!52;UBERON:0007135!3.64e-22!52;UBERON:0001017!1.83e-21!73;UBERON:0005743!1.83e-21!73;UBERON:0000033!2.13e-21!63;UBERON:0004121!1.10e-20!102;UBERON:0000924!1.10e-20!102;UBERON:0006601!1.10e-20!102;UBERON:0002346!2.99e-20!71;UBERON:0003075!2.99e-20!71;UBERON:0007284!2.99e-20!71;UBERON:0000955!3.17e-20!50;UBERON:0006238!3.17e-20!50;UBERON:0002616!4.58e-20!49;UBERON:0003056!7.29e-20!49;UBERON:0000073!1.06e-19!75;UBERON:0001016!1.06e-19!75;UBERON:0002020!2.81e-18!34;UBERON:0003080!5.14e-18!40;UBERON:0002780!2.61e-17!39;UBERON:0001890!2.61e-17!39;UBERON:0006240!2.61e-17!39;UBERON:0002791!3.00e-15!29;UBERON:0003528!3.00e-15!29;UBERON:0001893!3.00e-15!29;UBERON:0000956!1.03e-10!21;UBERON:0001869!1.03e-10!21;UBERON:0000203!1.03e-10!21;UBERON:0000468!3.54e-10!333;UBERON:0002619!1.16e-08!17;UBERON:0007811!1.72e-08!86;UBERON:0000153!1.86e-08!94;UBERON:0000025!1.16e-07!114;UBERON:0000922!1.34e-07!328;UBERON:0004111!6.01e-07!122 | |ontology_enrichment_uberon=UBERON:0001049!3.64e-22!52;UBERON:0005068!3.64e-22!52;UBERON:0006241!3.64e-22!52;UBERON:0007135!3.64e-22!52;UBERON:0001017!1.83e-21!73;UBERON:0005743!1.83e-21!73;UBERON:0000033!2.13e-21!63;UBERON:0004121!1.10e-20!102;UBERON:0000924!1.10e-20!102;UBERON:0006601!1.10e-20!102;UBERON:0002346!2.99e-20!71;UBERON:0003075!2.99e-20!71;UBERON:0007284!2.99e-20!71;UBERON:0000955!3.17e-20!50;UBERON:0006238!3.17e-20!50;UBERON:0002616!4.58e-20!49;UBERON:0003056!7.29e-20!49;UBERON:0000073!1.06e-19!75;UBERON:0001016!1.06e-19!75;UBERON:0002020!2.81e-18!34;UBERON:0003080!5.14e-18!40;UBERON:0002780!2.61e-17!39;UBERON:0001890!2.61e-17!39;UBERON:0006240!2.61e-17!39;UBERON:0002791!3.00e-15!29;UBERON:0003528!3.00e-15!29;UBERON:0001893!3.00e-15!29;UBERON:0000956!1.03e-10!21;UBERON:0001869!1.03e-10!21;UBERON:0000203!1.03e-10!21;UBERON:0000468!3.54e-10!333;UBERON:0002619!1.16e-08!17;UBERON:0007811!1.72e-08!86;UBERON:0000153!1.86e-08!94;UBERON:0000025!1.16e-07!114;UBERON:0000922!1.34e-07!328;UBERON:0004111!6.01e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,8.59e-25,73;UBERON:0000073,1.84e-24,54;UBERON:0001049,2.49e-23,52;UBERON:0005068,2.49e-23,52;UBERON:0006241,2.49e-23,52;UBERON:0007135,2.49e-23,52;UBERON:0002346,9.98e-23,64;UBERON:0003075,9.98e-23,64;UBERON:0007284,9.98e-23,64;UBERON:0004121,1.12e-21,95;UBERON:0000924,1.12e-21,95;UBERON:0006601,1.12e-21,95;UBERON:0001017,1.15e-20,73;UBERON:0003056,1.55e-20,49;UBERON:0000955,1.79e-19,47;UBERON:0006238,1.79e-19,47;UBERON:0002616,2.62e-19,46;UBERON:0002020,3.24e-19,34;UBERON:0001016,3.35e-19,75;UBERON:0003080,1.43e-18,40;UBERON:0002780,7.88e-18,39;UBERON:0001890,7.88e-18,39;UBERON:0006240,7.88e-18,39;UBERON:0010314,6.51e-17,92;UBERON:0003528,5.12e-16,29;UBERON:0002791,5.12e-16,29;UBERON:0001893,5.12e-16,29;UBERON:0000956,3.17e-11,21;UBERON:0001869,3.17e-11,21;UBERON:0000203,3.17e-11,21;UBERON:0002619,4.63e-09,17 | |||
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| ||
|short_description=p2@Ephb1 | |short_description=p2@Ephb1 | ||
}} | }} |
Latest revision as of 01:34, 26 September 2015
Short description: | p2@Ephb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ephb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000035129, ENSMUST00000085169, ENSMUST00000149800, NM_001168296, NM_173447, uc009rfn.2, uc009rfo.2, uc012gzg.1_5end |
EntrezGene: | Ephb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.27e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.27e-15 | 23 |
neuron | 1.51e-08 | 33 |
neuronal stem cell | 1.51e-08 | 33 |
neuroblast | 1.51e-08 | 33 |
electrically signaling cell | 1.51e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 8.59e-25 | 73 |
regional part of nervous system | 1.84e-24 | 54 |
neural tube | 2.49e-23 | 52 |
neural rod | 2.49e-23 | 52 |
future spinal cord | 2.49e-23 | 52 |
neural keel | 2.49e-23 | 52 |
neurectoderm | 9.98e-23 | 64 |
neural plate | 9.98e-23 | 64 |
presumptive neural plate | 9.98e-23 | 64 |
ectoderm-derived structure | 1.12e-21 | 95 |
ectoderm | 1.12e-21 | 95 |
presumptive ectoderm | 1.12e-21 | 95 |
central nervous system | 1.15e-20 | 73 |
pre-chordal neural plate | 1.55e-20 | 49 |
brain | 1.79e-19 | 47 |
future brain | 1.79e-19 | 47 |
regional part of brain | 2.62e-19 | 46 |
gray matter | 3.24e-19 | 34 |
nervous system | 3.35e-19 | 75 |
anterior neural tube | 1.43e-18 | 40 |
regional part of forebrain | 7.88e-18 | 39 |
forebrain | 7.88e-18 | 39 |
future forebrain | 7.88e-18 | 39 |
structure with developmental contribution from neural crest | 6.51e-17 | 92 |
brain grey matter | 5.12e-16 | 29 |
regional part of telencephalon | 5.12e-16 | 29 |
telencephalon | 5.12e-16 | 29 |
cerebral cortex | 3.17e-11 | 21 |
cerebral hemisphere | 3.17e-11 | 21 |
pallium | 3.17e-11 | 21 |
regional part of cerebral cortex | 4.63e-09 | 17 |