FFCP PHASE1:Hg19::chr11:18034430..18034507,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:18034430..18034507,-
|short_description=p2@SERGEF
|description=CAGE_peak_2_at_SERGEF_5end
|association_with_transcript=0bp_to_ENST00000527494,ENST00000529...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26297 | |EntrezGene=26297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17499 | |HGNC=17499 | ||
|UniProt=E9PL52, | |TSSclassifier=strong | ||
|UniProt=E9PL52,E9PMV6,E9PR50,E9PIV0,B4DFC0,E9PS70 | |||
|association_with_transcript=0bp_to_ENST00000527494,ENST00000529728,ENST00000530613,ENST00000530925,ENST00000532212,ENST00000532265,ENST00000532389,ENST00000533328,uc001mno.1,uc010rcz.1_5end | |||
|cluster_id=chr11:18034430..18034507,- | |||
|description=CAGE_peak_2_at_SERGEF_5end | |||
|id=chr11:18034430..18034507,- | |||
|ontology_enrichment_celltype=CL:0000542!1.45e-07!53;CL:0000051!1.45e-07!53;CL:0000838!2.81e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.39e-07,53;CL:0000051,1.39e-07,53;CL:0000838,2.71e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.55e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.26e-32!86;UBERON:0001017!1.20e-31!82;UBERON:0000073!1.44e-31!94;UBERON:0001016!1.44e-31!94;UBERON:0000955!6.94e-30!69;UBERON:0006238!6.94e-30!69;UBERON:0007023!5.47e-29!115;UBERON:0001049!1.44e-28!57;UBERON:0005068!1.44e-28!57;UBERON:0006241!1.44e-28!57;UBERON:0007135!1.44e-28!57;UBERON:0002616!1.58e-27!59;UBERON:0003080!2.39e-23!42;UBERON:0002780!3.34e-23!41;UBERON:0001890!3.34e-23!41;UBERON:0006240!3.34e-23!41;UBERON:0003075!3.76e-22!86;UBERON:0007284!3.76e-22!86;UBERON:0002346!9.15e-22!90;UBERON:0000153!2.14e-20!129;UBERON:0007811!2.14e-20!129;UBERON:0001893!2.36e-20!34;UBERON:0002020!2.89e-20!34;UBERON:0003528!2.89e-20!34;UBERON:0003056!9.11e-20!61;UBERON:0002791!1.13e-19!33;UBERON:0000033!1.24e-19!123;UBERON:0001869!1.85e-19!32;UBERON:0000924!2.32e-16!173;UBERON:0006601!2.32e-16!173;UBERON:0004121!2.40e-16!169;UBERON:0000956!1.52e-15!25;UBERON:0000203!1.52e-15!25;UBERON:0002619!8.20e-15!22;UBERON:0001950!1.26e-13!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.13e-18;32!UBERON:0001893;6.42e-18;34!UBERON:0003528;7.62e-18;34!UBERON:0002020;7.62e-18;34!UBERON:0002791;8.25e-18;32!UBERON:0002780;3.04e-17;41!UBERON:0001890;3.04e-17;41!UBERON:0000073;1.79e-16;53!UBERON:0002616;1.79e-16;53!UBERON:0000956;7.20e-16;25!UBERON:0000203;7.20e-16;25!UBERON:0002619;4.19e-15;22!UBERON:0001950;7.17e-14;20!UBERON:0001017;2.03e-13;75!UBERON:0000955;2.54e-13;68!UBERON:0001016;2.95e-12;83!UBERON:0007023;2.73e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.51e-31,81;UBERON:0001016,1.96e-30,89;UBERON:0000955,8.50e-30,68;UBERON:0006238,8.50e-30,68;UBERON:0001049,1.67e-28,56;UBERON:0005068,1.67e-28,56;UBERON:0006241,1.67e-28,56;UBERON:0007135,1.67e-28,56;UBERON:0007023,2.92e-28,114;UBERON:0000073,1.72e-27,53;UBERON:0002616,1.72e-27,53;UBERON:0002780,2.74e-23,41;UBERON:0001890,2.74e-23,41;UBERON:0003080,2.74e-23,41;UBERON:0006240,2.74e-23,41;UBERON:0003075,1.90e-22,82;UBERON:0007284,1.90e-22,82;UBERON:0002346,5.10e-22,86;UBERON:0001893,1.98e-20,34;UBERON:0003528,2.44e-20,34;UBERON:0002020,2.44e-20,34;UBERON:0001869,1.57e-19,32;UBERON:0002791,2.66e-19,32;UBERON:0003056,5.62e-19,61;UBERON:0004121,1.75e-17,171;UBERON:0000924,1.75e-17,171;UBERON:0006601,1.75e-17,171;UBERON:0011216,6.78e-16,223;UBERON:0000956,1.33e-15,25;UBERON:0000203,1.33e-15,25;UBERON:0010371,2.98e-15,104;UBERON:0002619,7.26e-15,22;UBERON:0001950,1.13e-13,20;UBERON:0010314,7.67e-13,132 | |||
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| ||
|short_description=p2@SERGEF | |||
}} | }} |
Latest revision as of 01:34, 17 September 2015
Short description: | p2@SERGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERGEF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527494, ENST00000529728, ENST00000530613, ENST00000530925, ENST00000532212, ENST00000532265, ENST00000532389, ENST00000533328, uc001mno.1, uc010rcz.1_5end |
EntrezGene: | SERGEF |
HGNC: | 17499 |
UniProt: | E9PL52E9PMV6E9PR50E9PIV0B4DFC0E9PS70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.39e-07 | 53 |
common lymphoid progenitor | 1.39e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.71e-07 | 52 |