FFCP PHASE1:Hg19::chr20:6033140..6033181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=267bp_to_AB527789_5end | |association_with_transcript=267bp_to_AB527789_5end | ||
|cluster_id=chr20:6033140..6033181,- | |||
|description=CAGE_peak_1_at_AB527789_5end | |description=CAGE_peak_1_at_AB527789_5end | ||
|id=chr20:6033140..6033181,- | |id=chr20:6033140..6033181,- | ||
|ontology_enrichment_celltype=CL:1000497!6.62e-14!18;CL:0002518!6.62e-14!18;CL:1000449!7.08e-12!16;CL:0000066!1.94e-10!254;CL:1000507!6.94e-10!12;CL:1000494!6.94e-10!12;CL:0002681!1.03e-08!13;CL:0002584!1.03e-08!13 | |ontology_enrichment_celltype=CL:1000497!6.62e-14!18;CL:0002518!6.62e-14!18;CL:1000449!7.08e-12!16;CL:0000066!1.94e-10!254;CL:1000507!6.94e-10!12;CL:1000494!6.94e-10!12;CL:0002681!1.03e-08!13;CL:0002584!1.03e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000497;5.73e-41;17!CL:0002518;5.73e-41;17!CL:1000449;3.86e-35;15!CL:1000507;3.76e-32;10!CL:1000494;3.76e-32;10!CL:0002681;6.77e-26;12!CL:0002584;6.77e-26;12!CL:1000746;1.64e-11;7!CL:1000612;1.64e-11;7!CL:0000239;3.78e-11;3!CL:1000615;3.78e-11;3!CL:0002306;3.78e-11;3!CL:1000415;5.25e-08;2!CL:0000650;2.27e-07;2!CL:1000500;2.27e-07;2!CL:1000618;2.27e-07;2!CL:1001318;2.27e-07;2!CL:0002173;2.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.58e-41,17;CL:0002518,3.58e-41,17;CL:1000449,2.64e-35,15;CL:1000507,2.88e-32,10;CL:1000494,2.88e-32,10;CL:0002681,4.96e-26,12;CL:0002584,4.96e-26,12;CL:0000066,1.45e-13,253;CL:1000746,1.23e-11,7;CL:1000612,1.23e-11,7;CL:0000239,5.49e-11,3;CL:1000615,5.49e-11,3;CL:0002306,5.49e-11,3;CL:1000415,4.07e-08,2;CL:0000650,1.78e-07,2;CL:1000500,1.78e-07,2;CL:1000618,1.78e-07,2;CL:1001318,1.78e-07,2;CL:0002173,1.78e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-13!57;UBERON:0005068!2.17e-13!57;UBERON:0006241!2.17e-13!57;UBERON:0007135!2.17e-13!57;UBERON:0000025!3.95e-13!194;UBERON:0006555!1.32e-12!17;UBERON:0005103!1.32e-12!17;UBERON:0000083!1.32e-12!17;UBERON:0009201!1.32e-12!17;UBERON:0004819!1.32e-12!17;UBERON:0006553!1.32e-12!17;UBERON:0003074!1.32e-12!17;UBERON:0003060!1.32e-12!17;UBERON:0001869!2.97e-12!32;UBERON:0000489!5.08e-12!32;UBERON:0002020!5.21e-12!34;UBERON:0003528!5.21e-12!34;UBERON:0004211!7.08e-12!16;UBERON:0001285!7.08e-12!16;UBERON:0007684!7.08e-12!16;UBERON:0003220!7.08e-12!16;UBERON:0004208!7.08e-12!16;UBERON:0002616!1.10e-11!59;UBERON:0000080!1.28e-11!18;UBERON:0002120!1.28e-11!18;UBERON:0004875!1.28e-11!18;UBERON:0005721!1.28e-11!18;UBERON:0005754!1.28e-11!18;UBERON:0007297!1.28e-11!18;UBERON:0000058!1.33e-11!26;UBERON:0002113!2.52e-11!27;UBERON:0003918!2.52e-11!27;UBERON:0005095!2.52e-11!27;UBERON:0007687!2.52e-11!27;UBERON:0004111!2.71e-11!241;UBERON:0002780!2.93e-11!41;UBERON:0001890!2.93e-11!41;UBERON:0006240!2.93e-11!41;UBERON:0001893!4.07e-11!34;UBERON:0003075!5.52e-11!86;UBERON:0007284!5.52e-11!86;UBERON:0003080!8.42e-11!42;UBERON:0000481!1.22e-10!347;UBERON:0002791!1.47e-10!33;UBERON:0000483!2.29e-10!309;UBERON:0005743!3.00e-10!86;UBERON:0005172!3.71e-10!55;UBERON:0005173!3.71e-10!55;UBERON:0000475!4.43e-10!365;UBERON:0001017!4.55e-10!82;UBERON:0000119!5.24e-10!312;UBERON:0004876!5.86e-10!20;UBERON:0002346!6.07e-10!90;UBERON:0009773!6.94e-10!12;UBERON:0001231!6.94e-10!12;UBERON:0004810!6.94e-10!12;UBERON:0000955!8.69e-10!69;UBERON:0006238!8.69e-10!69;UBERON:0000466!2.17e-09!126;UBERON:0000064!2.18e-09!219;UBERON:0003887!2.98e-09!21;UBERON:0000073!3.12e-09!94;UBERON:0001016!3.12e-09!94;UBERON:0006554!3.17e-09!44;UBERON:0005177!5.23e-09!107;UBERON:0002417!7.15e-09!61;UBERON:0000916!7.15e-09!61;UBERON:0001008!7.52e-09!45;UBERON:0003064!9.75e-09!37;UBERON:0003056!9.75e-09!61;UBERON:0001225!1.03e-08!13;UBERON:0008987!1.03e-08!13;UBERON:0001950!1.21e-08!20;UBERON:0000477!1.92e-08!286;UBERON:0002619!1.92e-08!22;UBERON:0003886!1.96e-08!63;UBERON:0000062!2.87e-08!511;UBERON:0007023!3.24e-08!115;UBERON:0000033!3.33e-08!123;UBERON:0002420!4.08e-08!9;UBERON:0007245!4.08e-08!9;UBERON:0010009!4.08e-08!9;UBERON:0010011!4.08e-08!9;UBERON:0000454!4.08e-08!9;UBERON:0001851!5.85e-08!16;UBERON:0000464!1.05e-07!104;UBERON:0002308!2.20e-07!9;UBERON:0000125!2.20e-07!9;UBERON:0000353!2.73e-07!17;UBERON:0002553!3.08e-07!70;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0000956!6.24e-07!25;UBERON:0000203!6.24e-07!25 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,3.48900583986214,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.589405839739707,1.45718115317017,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.386521706326594,1.09098448236334,1.14721838155602,0.121973706129595,0.397589304964456,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,2.33678033231916,0.171567810298526,0.109750285408626,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.992425680696705,0,0,0,0.985326475791887,2.0251139823042,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0.871533458600294,2.19940580600526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,2.90062679019893,0.802025881213139,0,0.114814448164607,0,0,3.15839729035188,1.77135275340154,3.13739907670742,7.30696123266303,2.74434235121477,0,0,2.37507507712353,1.54227252690289,2.70946437543853,1.50506932156456,3.05851527654046,4.98645605357235,2.0148727924996,0,0,0,0.328014645699706,0,0.206082023295445,0,0.165018999841176,1.72279661398852,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.562677665642051,0,0,0.211125408127993,0,0,0.503865495708552,0,0.123084805461069,0,8.44762500784872,0.179021174675609,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0.520874984799877,2.65722415744152,5.42683973814336,0,0.110579259931225,0.591095237907095,1.09692698576986,0,0,0,0,0,0,2.28159481036217,0.31900115973192,0.183195186803725,0,0,0,0.332423363800313,0,0,0,0,0.953619473882272,1.05499032264014,3.59112177950125,7.49171278599886,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,3.13070500632772,0,0.520679215005393,0,1.04471047896483,0.52418000472609,0,0,0,0,0,0,0,0,0,0.189932387867636,6.6487470129833,2.96587634930675,0.213452994739353,0,0.576361668616424,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0.687481272035051,0,0.199679000498991,0,0,0.335917362433631,0,0,0.551482276150566,0.494495150286999,0.337017719270924,0,0,0,0.136203406111576,0.964518890790115,0.962776056180637,0,0,0,1.03274246318642,0,1.65491985328316,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0,1.9221734262185,0.157204305099666,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0.886068179966986,0.854183854313742,0.751145584238999,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.751288044986092,1.90402606084398,0.406870733204662,0,0.751873899297419,0,0,0,0,0,0,0,1.28664954824955,0,0.453411851024545,0.463044948647668,0,0,2.47041157728778,1.75427239662966,0.706756583783524,0.38582807654183,1.18259708457151,0,0,0,1.10606748921385,0,0,0,0,0,2.74705760366215,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,2.63339822895484,0,0.159633859057151,0.82046545696302,0.252071696221718,0.276629009856872,0.807378228159255,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,2.34454203369928,0,0,3.252833896775,0.337687923091973,0,0,0.634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.475788130837822,0.263091094251396,0.236387681767936,0,0.078493092850514,3.92788974790005,5.0448989396482,0,3.45484145949794,1.43325506366115,0.0714765441766563,0,18.1336623574275,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,1.78968690876468,0,0.487671699929078,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,4.37792246343353,0,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0.436350690340377,1.5870805215462,0,0,0,0,0.327796715891087,0.126698501011437,0.203977659483963,0,0,0.250707539292375,0.227336094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| ||
|short_description=p1@AB527789 | |short_description=p1@AB527789 | ||
}} | }} |
Latest revision as of 16:03, 28 July 2015
Short description: | p1@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB527789_5end |
Coexpression cluster: | NA |
Association with transcript: | 267bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.58e-41 | 17 |
kidney epithelial cell | 3.58e-41 | 17 |
epithelial cell of nephron | 2.64e-35 | 15 |
kidney tubule cell | 2.88e-32 | 10 |
nephron tubule epithelial cell | 2.88e-32 | 10 |
kidney cortical cell | 4.96e-26 | 12 |
renal cortical epithelial cell | 4.96e-26 | 12 |
epithelial cell | 1.45e-13 | 253 |
glomerular cell | 1.23e-11 | 7 |
kidney corpuscule cell | 1.23e-11 | 7 |
brush border epithelial cell | 5.49e-11 | 3 |
kidney cortex tubule cell | 5.49e-11 | 3 |
epithelial cell of proximal tubule | 5.49e-11 | 3 |
epithelial cell of gall bladder | 4.07e-08 | 2 |
mesangial cell | 1.78e-07 | 2 |
kidney interstitial cell | 1.78e-07 | 2 |
juxtaglomerular complex cell | 1.78e-07 | 2 |
renal interstitial pericyte | 1.78e-07 | 2 |
extraglomerular mesangial cell | 1.78e-07 | 2 |
Ontology term | p-value | n |
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