FFCP PHASE1:Hg19::chr2:191184571..191184593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26275 | |EntrezGene=26275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4908 | |HGNC=4908 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc002uru.2,uc002urv.2_5end | |association_with_transcript=-12bp_to_uc002uru.2,uc002urv.2_5end | ||
|cluster_id=chr2:191184571..191184593,- | |||
|description=CAGE_peak_3_at_HIBCH_5end | |description=CAGE_peak_3_at_HIBCH_5end | ||
|id=chr2:191184571..191184593,- | |id=chr2:191184571..191184593,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-24!115;UBERON:0000073!7.80e-16!94;UBERON:0001016!7.80e-16!94;UBERON:0001049!2.02e-15!57;UBERON:0005068!2.02e-15!57;UBERON:0006241!2.02e-15!57;UBERON:0007135!2.02e-15!57;UBERON:0001017!1.65e-14!82;UBERON:0005743!1.87e-14!86;UBERON:0002616!5.44e-14!59;UBERON:0002780!1.94e-13!41;UBERON:0001890!1.94e-13!41;UBERON:0006240!1.94e-13!41;UBERON:0003080!2.09e-13!42;UBERON:0000955!8.02e-13!69;UBERON:0006238!8.02e-13!69;UBERON:0002346!6.91e-11!90;UBERON:0003075!1.06e-10!86;UBERON:0007284!1.06e-10!86;UBERON:0002020!7.24e-10!34;UBERON:0003528!7.24e-10!34;UBERON:0001893!9.65e-10!34;UBERON:0002791!2.18e-09!33;UBERON:0001869!1.11e-08!32;UBERON:0000924!1.10e-07!173;UBERON:0006601!1.10e-07!173;UBERON:0004121!1.89e-07!169;UBERON:0002619!2.19e-07!22;UBERON:0003056!3.20e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.10e-10;41!UBERON:0001890;2.10e-10;41!UBERON:0000073;1.32e-09;53!UBERON:0002616;1.32e-09;53!UBERON:0003528;5.58e-09;34!UBERON:0002020;5.58e-09;34!UBERON:0001893;2.01e-08;34!UBERON:0002791;2.44e-08;32!UBERON:0001869;3.77e-08;32!UBERON:0002619;1.02e-07;22!UBERON:0007023;5.44e-07;114!UBERON:0001017;5.44e-07;75!UBERON:0000955;6.84e-07;68!UBERON:0001016;9.23e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.87e-24,114;UBERON:0001016,3.21e-16,89;UBERON:0001049,9.55e-16,56;UBERON:0005068,9.55e-16,56;UBERON:0006241,9.55e-16,56;UBERON:0007135,9.55e-16,56;UBERON:0001017,8.01e-15,81;UBERON:0000073,3.67e-14,53;UBERON:0002616,3.67e-14,53;UBERON:0002780,7.23e-14,41;UBERON:0001890,7.23e-14,41;UBERON:0003080,7.23e-14,41;UBERON:0006240,7.23e-14,41;UBERON:0000955,3.48e-13,68;UBERON:0006238,3.48e-13,68;UBERON:0011216,1.17e-11,223;UBERON:0002346,7.71e-11,86;UBERON:0003075,1.18e-10,82;UBERON:0007284,1.18e-10,82;UBERON:0003528,3.33e-10,34;UBERON:0002020,3.33e-10,34;UBERON:0001893,4.47e-10,34;UBERON:0010314,8.16e-10,132;UBERON:0002791,3.42e-09,32;UBERON:0001869,5.49e-09,32;UBERON:0003056,3.94e-08,61;UBERON:0004121,6.12e-08,171;UBERON:0000924,6.12e-08,171;UBERON:0006601,6.12e-08,171;UBERON:0002619,1.12e-07,22;UBERON:0010371,7.62e-07,104 | |||
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| ||
|short_description=p3@HIBCH | |short_description=p3@HIBCH | ||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p3@HIBCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HIBCH_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_uc002uru.2, uc002urv.2_5end |
EntrezGene: | HIBCH |
HGNC: | 4908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.87e-24 | 114 |
nervous system | 3.21e-16 | 89 |
neural tube | 9.55e-16 | 56 |
neural rod | 9.55e-16 | 56 |
future spinal cord | 9.55e-16 | 56 |
neural keel | 9.55e-16 | 56 |
central nervous system | 8.01e-15 | 81 |
regional part of nervous system | 3.67e-14 | 53 |
regional part of brain | 3.67e-14 | 53 |
regional part of forebrain | 7.23e-14 | 41 |
forebrain | 7.23e-14 | 41 |
anterior neural tube | 7.23e-14 | 41 |
future forebrain | 7.23e-14 | 41 |
brain | 3.48e-13 | 68 |
future brain | 3.48e-13 | 68 |
organ system subdivision | 1.17e-11 | 223 |
neurectoderm | 7.71e-11 | 86 |
neural plate | 1.18e-10 | 82 |
presumptive neural plate | 1.18e-10 | 82 |
brain grey matter | 3.33e-10 | 34 |
gray matter | 3.33e-10 | 34 |
telencephalon | 4.47e-10 | 34 |
structure with developmental contribution from neural crest | 8.16e-10 | 132 |
regional part of telencephalon | 3.42e-09 | 32 |
cerebral hemisphere | 5.49e-09 | 32 |
pre-chordal neural plate | 3.94e-08 | 61 |
ectoderm-derived structure | 6.12e-08 | 171 |
ectoderm | 6.12e-08 | 171 |
presumptive ectoderm | 6.12e-08 | 171 |
regional part of cerebral cortex | 1.12e-07 | 22 |
ecto-epithelium | 7.62e-07 | 104 |