FFCP PHASE1:Hg19::chr12:93835665..93835750,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:93835665..93835750,-
|short_description=p1@UBE2N
|description=CAGE_peak_1_at_UBE2N_5end
|association_with_transcript=0bp_to_ENST00000549490,ENST0000055065...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7334 | |EntrezGene=7334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12492 | |HGNC=12492 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZ29,F8VV71,F8VSD4 | |UniProt=F8VZ29,F8VV71,F8VSD4 | ||
|association_with_transcript=0bp_to_ENST00000549490,ENST00000550657,ENST00000552442_5end | |||
|cluster_id=chr12:93835665..93835750,- | |||
|description=CAGE_peak_1_at_UBE2N_5end | |||
|id=chr12:93835665..93835750,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!6.01e-10!51;DOID:0060083!6.01e-10!51;DOID:1240!1.73e-08!39;DOID:8692!3.14e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.16e-07;31!DOID:2531;4.37e-07;51!DOID:0060083;4.37e-07;51!DOID:1240;4.54e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.01e-10,51;DOID:0060083,6.01e-10,51;DOID:1240,1.73e-08,39;DOID:8692,3.14e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001869!8.47e-12!32;UBERON:0002020!7.26e-11!34;UBERON:0003528!7.26e-11!34;UBERON:0001893!3.19e-10!34;UBERON:0000956!4.83e-10!25;UBERON:0000203!4.83e-10!25;UBERON:0002780!6.16e-10!41;UBERON:0001890!6.16e-10!41;UBERON:0006240!6.16e-10!41;UBERON:0002791!8.01e-10!33;UBERON:0003080!1.17e-09!42;UBERON:0001017!1.30e-09!82;UBERON:0001049!2.14e-09!57;UBERON:0005068!2.14e-09!57;UBERON:0006241!2.14e-09!57;UBERON:0007135!2.14e-09!57;UBERON:0002619!8.16e-09!22;UBERON:0002616!8.88e-09!59;UBERON:0005743!1.61e-08!86;UBERON:0000073!1.62e-08!94;UBERON:0001016!1.62e-08!94;UBERON:0001950!2.80e-08!20;UBERON:0003056!4.42e-08!61;UBERON:0000955!1.82e-07!69;UBERON:0006238!1.82e-07!69;UBERON:0003075!7.29e-07!86;UBERON:0007284!7.29e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.15e-11;32!UBERON:0003528;4.20e-10;34!UBERON:0002020;4.20e-10;34!UBERON:0000956;4.73e-10;25!UBERON:0000203;4.73e-10;25!UBERON:0002791;5.59e-10;32!UBERON:0001893;2.07e-09;34!UBERON:0002619;8.05e-09;22!UBERON:0001950;2.71e-08;20!UBERON:0002780;3.57e-07;41!UBERON:0001890;3.57e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.47e-12,32;UBERON:0003528,7.26e-11,34;UBERON:0002020,7.26e-11,34;UBERON:0002791,1.28e-10,32;UBERON:0001893,3.19e-10,34;UBERON:0000956,4.83e-10,25;UBERON:0000203,4.83e-10,25;UBERON:0000073,5.37e-10,53;UBERON:0002616,5.37e-10,53;UBERON:0002780,6.16e-10,41;UBERON:0001890,6.16e-10,41;UBERON:0003080,6.16e-10,41;UBERON:0006240,6.16e-10,41;UBERON:0001017,9.09e-10,81;UBERON:0001016,1.10e-09,89;UBERON:0001049,1.32e-09,56;UBERON:0005068,1.32e-09,56;UBERON:0006241,1.32e-09,56;UBERON:0007135,1.32e-09,56;UBERON:0002619,8.16e-09,22;UBERON:0001950,2.80e-08,20;UBERON:0003056,8.99e-08,61;UBERON:0000955,1.31e-07,68;UBERON:0006238,1.31e-07,68;UBERON:0010371,1.49e-07,104;UBERON:0003075,1.91e-07,82;UBERON:0007284,1.91e-07,82;UBERON:0010314,2.53e-07,132 | |||
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| ||
|short_description=p1@UBE2N | |||
}} | }} |
Latest revision as of 23:54, 15 September 2015
Short description: | p1@UBE2N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2N_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549490, ENST00000550657, ENST00000552442_5end |
EntrezGene: | UBE2N |
HGNC: | 12492 |
UniProt: | F8VZ29F8VV71F8VSD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.47e-12 | 32 |
brain grey matter | 7.26e-11 | 34 |
gray matter | 7.26e-11 | 34 |
regional part of telencephalon | 1.28e-10 | 32 |
telencephalon | 3.19e-10 | 34 |
cerebral cortex | 4.83e-10 | 25 |
pallium | 4.83e-10 | 25 |
regional part of nervous system | 5.37e-10 | 53 |
regional part of brain | 5.37e-10 | 53 |
regional part of forebrain | 6.16e-10 | 41 |
forebrain | 6.16e-10 | 41 |
anterior neural tube | 6.16e-10 | 41 |
future forebrain | 6.16e-10 | 41 |
central nervous system | 9.09e-10 | 81 |
nervous system | 1.10e-09 | 89 |
neural tube | 1.32e-09 | 56 |
neural rod | 1.32e-09 | 56 |
future spinal cord | 1.32e-09 | 56 |
neural keel | 1.32e-09 | 56 |
regional part of cerebral cortex | 8.16e-09 | 22 |
neocortex | 2.80e-08 | 20 |
pre-chordal neural plate | 8.99e-08 | 61 |
brain | 1.31e-07 | 68 |
future brain | 1.31e-07 | 68 |
ecto-epithelium | 1.49e-07 | 104 |
neural plate | 1.91e-07 | 82 |
presumptive neural plate | 1.91e-07 | 82 |
structure with developmental contribution from neural crest | 2.53e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.01e-10 | 51 |
immune system cancer | 6.01e-10 | 51 |
leukemia | 1.73e-08 | 39 |
myeloid leukemia | 3.14e-07 | 31 |