FFCP PHASE1:Hg19::chr4:2420416..2420440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57732 | |EntrezGene=57732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29334 | |HGNC=29334 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCC9 | |UniProt=Q9HCC9 | ||
|association_with_transcript=-26bp_to_ENST00000290974_5end | |association_with_transcript=-26bp_to_ENST00000290974_5end | ||
|cluster_id=chr4:2420416..2420440,- | |||
|coexpression_cluster_id=C2519 | |||
|description=CAGE_peak_4_at_ZFYVE28_5end | |description=CAGE_peak_4_at_ZFYVE28_5end | ||
|id=chr4:2420416..2420440,- | |id=chr4:2420416..2420440,- | ||
|ontology_enrichment_celltype=CL:0002087!1.11e-09!119;CL:0002031!2.02e-09!124;CL:0000738!3.17e-09!140;CL:0000791!1.28e-08!18;CL:0000789!1.28e-08!18;CL:0002420!1.28e-08!18;CL:0002419!1.28e-08!18;CL:0000790!1.28e-08!18;CL:0000084!4.20e-08!25;CL:0000827!4.20e-08!25 | |ontology_enrichment_celltype=CL:0002087!1.11e-09!119;CL:0002031!2.02e-09!124;CL:0000738!3.17e-09!140;CL:0000791!1.28e-08!18;CL:0000789!1.28e-08!18;CL:0002420!1.28e-08!18;CL:0002419!1.28e-08!18;CL:0000790!1.28e-08!18;CL:0000084!4.20e-08!25;CL:0000827!4.20e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.29e-15;18!CL:0000789;3.29e-15;18!CL:0002419;3.29e-15;18!CL:0000084;6.31e-12;25!CL:0000624;6.45e-08;6!CL:0000625;7.53e-08;11!CL:0000623;1.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.14e-16,18;CL:0000789,8.14e-16,18;CL:0002420,8.14e-16,18;CL:0002419,8.14e-16,18;CL:0000790,8.14e-16,18;CL:0000084,2.21e-12,25;CL:0000827,2.21e-12,25;CL:0000738,2.71e-11,136;CL:0002031,1.70e-10,120;CL:0002087,2.97e-10,115;CL:0000624,2.64e-08,6;CL:0000625,3.26e-08,11;CL:0000623,1.92e-07,3;CL:0000825,1.92e-07,3;CL:0000037,2.86e-07,168;CL:0000838,6.67e-07,52;CL:0002032,8.86e-07,161;CL:0000837,8.86e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.29e-15;18!UBERON:0006215;1.22e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-21!115;UBERON:0001049!1.71e-16!57;UBERON:0005068!1.71e-16!57;UBERON:0006241!1.71e-16!57;UBERON:0007135!1.71e-16!57;UBERON:0002616!9.40e-15!59;UBERON:0000955!7.09e-14!69;UBERON:0006238!7.09e-14!69;UBERON:0001017!9.10e-13!82;UBERON:0003080!1.69e-12!42;UBERON:0005743!2.68e-12!86;UBERON:0003075!3.17e-12!86;UBERON:0007284!3.17e-12!86;UBERON:0002780!3.69e-12!41;UBERON:0001890!3.69e-12!41;UBERON:0006240!3.69e-12!41;UBERON:0002346!5.69e-11!90;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0002020!1.10e-09!34;UBERON:0003528!1.10e-09!34;UBERON:0001893!1.77e-09!34;UBERON:0002791!6.23e-09!33;UBERON:0001869!1.08e-08!32;UBERON:0002390!2.02e-08!102;UBERON:0003061!2.02e-08!102;UBERON:0002619!3.78e-08!22;UBERON:0000153!1.08e-07!129;UBERON:0007811!1.08e-07!129;UBERON:0002193!1.61e-07!112;UBERON:0003056!2.91e-07!61;UBERON:0001950!3.91e-07!20;UBERON:0000033!4.16e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!2.99e-21!115;UBERON:0001049!1.71e-16!57;UBERON:0005068!1.71e-16!57;UBERON:0006241!1.71e-16!57;UBERON:0007135!1.71e-16!57;UBERON:0002616!9.40e-15!59;UBERON:0000955!7.09e-14!69;UBERON:0006238!7.09e-14!69;UBERON:0001017!9.10e-13!82;UBERON:0003080!1.69e-12!42;UBERON:0005743!2.68e-12!86;UBERON:0003075!3.17e-12!86;UBERON:0007284!3.17e-12!86;UBERON:0002780!3.69e-12!41;UBERON:0001890!3.69e-12!41;UBERON:0006240!3.69e-12!41;UBERON:0002346!5.69e-11!90;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0002020!1.10e-09!34;UBERON:0003528!1.10e-09!34;UBERON:0001893!1.77e-09!34;UBERON:0002791!6.23e-09!33;UBERON:0001869!1.08e-08!32;UBERON:0002390!2.02e-08!102;UBERON:0003061!2.02e-08!102;UBERON:0002619!3.78e-08!22;UBERON:0000153!1.08e-07!129;UBERON:0007811!1.08e-07!129;UBERON:0002193!1.61e-07!112;UBERON:0003056!2.91e-07!61;UBERON:0001950!3.91e-07!20;UBERON:0000033!4.16e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.47e-14;34!UBERON:0002020;1.47e-14;34!UBERON:0002780;9.20e-14;41!UBERON:0001890;9.20e-14;41!UBERON:0002791;2.07e-13;32!UBERON:0001869;5.04e-13;32!UBERON:0001893;5.36e-13;34!UBERON:0000073;6.45e-13;53!UBERON:0002616;6.45e-13;53!UBERON:0002619;3.14e-12;22!UBERON:0000956;2.06e-10;25!UBERON:0000203;2.06e-10;25!UBERON:0001950;6.31e-10;20!UBERON:0000125;1.75e-09;9!UBERON:0002308;1.75e-09;9!UBERON:0000955;2.57e-08;68!UBERON:0002420;4.01e-07;9!UBERON:0007245;4.01e-07;9!UBERON:0010009;4.01e-07;9!UBERON:0010011;4.01e-07;9!UBERON:0000454;4.01e-07;9!UBERON:0009663;8.89e-07;7 | |||
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| ||
|short_description=p4@ZFYVE28 | |short_description=p4@ZFYVE28 | ||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p4@ZFYVE28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZFYVE28_5end |
Coexpression cluster: | C2519_cerebellum_CD8_Natural_CD4_Mast_Basophils_Peripheral |
Association with transcript: | -26bp_to_ENST00000290974_5end |
EntrezGene: | ZFYVE28 |
HGNC: | 29334 |
UniProt: | Q9HCC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.14e-16 | 18 |
alpha-beta T cell | 8.14e-16 | 18 |
immature T cell | 8.14e-16 | 18 |
mature T cell | 8.14e-16 | 18 |
immature alpha-beta T cell | 8.14e-16 | 18 |
T cell | 2.21e-12 | 25 |
pro-T cell | 2.21e-12 | 25 |
leukocyte | 2.71e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.70e-10 | 120 |
nongranular leukocyte | 2.97e-10 | 115 |
CD4-positive, alpha-beta T cell | 2.64e-08 | 6 |
CD8-positive, alpha-beta T cell | 3.26e-08 | 11 |
natural killer cell | 1.92e-07 | 3 |
pro-NK cell | 1.92e-07 | 3 |
hematopoietic stem cell | 2.86e-07 | 168 |
lymphoid lineage restricted progenitor cell | 6.67e-07 | 52 |
hematopoietic oligopotent progenitor cell | 8.86e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.86e-07 | 161 |